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Video Clips

RealVideo®
10:37 minutes (7:30 - 18:07)
Endergonic and exergonic reactions reflect changes in Gibbs free energy (δ G). Enzymes lower activation energy to speed up reaction.
Prof. Eric Lander, Prof. Robert Weinberg, Dr. Claudette Gardel
Chemical reactions and energetics is helpful
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RealVideo®
17:42 minutes (15:27 - 33:09)
Changes in free energy drive chemical reactions. Gibbs free energy calculated using equilibrium constant under physiological conditions. Examples: Sucrose hydrolysis and deprotonation of acetic acid.
Prof. Penny Chisholm, Prof. Graham Walker, Dr. Julia Khodor, Dr. Michelle Mischke
None
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RealVideo®
4:44 minutes (42:35 - 47:19)
Effect of activation energy on reaction rate, and function of catalysts.
Prof. Penny Chisholm, Prof. Graham Walker, Dr. Julia Khodor, Dr. Michelle Mischke
None
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RealVideo®
4:30 minutes (9:31 - 14:01)
ATP as the energy currency. Energy released when ATP is hydrolyzed into ADP and inorganic phosphate.
Prof. Penny Chisholm, Prof. Graham Walker, Dr. Julia Khodor, Dr. Michelle Mischke
None
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Lecture Notes

PDF
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Page 1 to page 2
Chemical reactions are based on thermodynamics and kinetics. Free energy diagram shows the energy of reaction, and the effect of enzymes on the activation energy.
Prof. Eric Lander, Prof. Robert Weinberg, Dr. Claudette Gardel
None
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PDF
Page 2
Definition, calculation, and significance of free energy (delta G) and the equilibrium constant (Keq) in biochemical reactions.
Prof. Penny Chisholm, Prof. Graham Walker, Dr. Julia Khodor, Dr. Michelle Mischke
None
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PDF
Page 1 to page 5
Definitions of oxidation and reduction. Examples and different representations of biological redox reactions. Delta E, delta G, the Nernst Equation and sample calculations.
Prof. Penny Chisholm, Prof. Graham Walker, Dr. Julia Khodor, Dr. Michelle Mischke
None
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PDF
Page 6
A list of half reactions (reductions) ordered by E values.
Prof. Penny Chisholm, Prof. Graham Walker, Dr. Julia Khodor, Dr. Michelle Mischke
None
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Practice Problems

PDF
Problem 2 (page 4)
Example involving reaction driven and regulated by ATP, concentration gradient, and change in free energy.
Prof. Penny Chisholm, Prof. Graham Walker, Dr. Julia Khodor, Dr. Michelle Mischke
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PDF
All Problems (All Pages)
Enzymes, catalytic pockets, and reaction energetics. Contains a figure of all amino acid side chains as well as single letter and triple letter abbreviations.
Prof. Eric Lander, Prof. Robert Weinberg, Dr. Claudette Gardel
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PDF
Problem B (page 1)
Free energy, energy storage, spontaneous reactions, and the use of biological catalysts.
Prof. Penny Chisholm, Prof. Graham Walker, Dr. Julia Khodor, Dr. Michelle Mischke
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Exam Questions

PDF
Problem 3 (page 7)
Label parts of a basic free energy diagram and how enzymes change the diagram.
Prof. Penny Chisholm, Prof. Graham Walker, Dr. Julia Khodor, Dr. Michelle Mischke
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