20.109 | Spring 2010 | Undergraduate

Laboratory Fundamentals in Biological Engineering

Assignments

Overview

You will perform three series of experiments (called “modules”) over the course of the semester. The modules differ in both intellectual and experimental content, and in the ways that your learning will be assessed. Links to the experiments and assignments are provided below.

You will be working as pairs throughout the semester in lab, but you must submit individual written work (for both daily homeworks and major assignments) and give individual journal club presentations. You will close out the course by developing and presenting a novel research idea as a two-person team. Please read the 20.109 statement on collaboration and integrity for more detail about academic honesty in our class.

We appreciate that time management can be a difficult skill to develop, and that learning takes place on many time-scales. However, when assignments are turned in at wildly disparate times, it creates additional logistical burdens for the teaching faculty. Therefore, late work (both daily and culminating assignments) will be penalized 1/3 of a letter grade for each day late and will not be accepted after a week. We strongly recommend that you plan ahead and space out your work when possible.

Major Assignments

MODULES TOPICS ASSIGNMENTS % OF FINAL GRADE DESCRIPTIONS
1 RNA Engineering Laboratory report 15

Assignment description and evaluation rubric

Guidelines for writing up your research

Computational analysis 5

Assignment description

Data (RTF)

Journal club presentation 10

Sign-up for articles

Guidelines for oral presentations

Evaluation rubric (PDF)

2 Protein Engineering Research article 25

Assignment description and evaluation rubric

Guidelines for writing up your research

3 Cell-Biomaterial Engineering Research idea presentation 20

Assignment description

Evaluation rubric (PDF)

Data summary 5 Assignment description and evaluation rubric

Daily Work

In addition to the module assignments listed above, there are several other forms of required coursework.

  • Daily Lab Quizzes (5% of final grade)

    • These are intended to refresh your memory about the experiment you are performing. They will not be hard and should take no more than 5-10 minutes at the beginning of lab.
  • Homework Assignments (8% of final grade)

    • These will vary considerably in content and points associated with each assignment. You may be asked to perform a calculation, draw a conclusion, and/or make a figure using the data you have collected. The homeworks can be found in the “for next time” section of each lab day. You can work with your lab partner, friends and teaching assistants on these assignments but you will hand in individual assignments unless otherwise specified.
  • Laboratory Notebooks (5% of final grade)

    • You will record your data on the white pages of a bound notebook. The yellow, duplicate pages will be collected and evaluated by the teaching assistants. Notebooks will be evaluated according to these guidelines.
  • Participation (2% of final grade)

    • As a student in 20.109, you are expected to be an active participant in a scientific community. Your student colleagues, the teaching faculty, and especially your lab partner, are all your collaborators. They rely on you for timely posting of your data, and for your unique and thoughtful contributions during class. Your participation grade will ultimately be reviewed by all the teaching faculty, but as a starting point, you should fill out the self-assessment rubric once per module. (PDF)
Learning Resource Types
Other Video
Presentation Assignments
Written Assignments
Lecture Notes