Below is a partial selection of lecture notes that approximate chronologically the topics and themes listed on the calendar. The lecture notes are under development.
Lecture notes files.
| Lec # |
Topics |
| 1 |
Computational Challenges (PDF) |
| 2 |
BLAST (PDF) |
| 3 |
Motif Discovery (PDF - 1.2 MB) |
| 4 |
Gibbs Sampling (PDF) |
| 5 |
Sequence Alignment (PDF - 1.4 MB) |
| 6 |
RNA Secondary Structure |
| 7 |
HMMs and Gene Finding (PDF) |
| 8 |
Genome Evolution and Phylogenetic Trees |
| 9 |
Phylogenetic Trees |
| 10-11 |
Genome Rearrangements, Genome Duplication |
| 12 |
Biological Networks |
