Site CDNA-Pos Description Allele1 -freq ED-freq Total-freq Allele2 ED-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000995 00000 ------------ - 0.00 0.40 0.30 + 1.00 0.60 0.70 0000 --- --- --- --- 001129 00000 ------------ C 0.93 0.83 0.88 G 0.07 0.17 0.12 0000 --- --- --- --- 001132 00000 ------------ C 0.50 0.67 0.59 T 0.50 0.33 0.41 0000 --- --- --- --- 001155 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 001264 00000 ------------ A 1.00 0.89 0.94 C 0.00 0.11 0.06 0000 --- --- --- --- 001352 00000 ------------ - 0.14 0.22 0.19 + 0.86 0.78 0.81 0000 --- --- --- --- 001691 00000 ------------ C 0.53 0.69 0.62 G 0.47 0.31 0.38 0000 --- --- --- --- 001739 00000 ------------ C 0.94 0.54 0.71 T 0.06 0.46 0.29 0000 --- --- --- --- 001743 00000 ------------ G 0.81 0.80 0.81 A 0.19 0.20 0.19 0000 --- --- --- --- 001762 00000 ------------ C 0.94 0.98 0.96 T 0.06 0.02 0.04 0000 --- --- --- --- 001863 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 001899 00026 5' UTR - 0.00 0.48 0.27 + 1.00 0.52 0.73 0000 --- --- --- --- 002434 00000 ------------ C 0.33 1.00 0.86 A 0.67 0.00 0.14 0000 --- --- --- --- 002464 00000 ------------ G 0.33 1.00 0.86 A 0.67 0.00 0.14 0000 --- --- --- --- 002477 00000 ------------ - 0.40 0.79 0.71 + 0.60 0.21 0.29 0000 --- --- --- --- 002511 00000 ------------ C 0.40 0.78 0.70 T 0.60 0.22 0.30 0000 --- --- --- --- 002625 00000 ------------ C 0.90 0.89 0.89 T 0.10 0.11 0.11 0000 --- --- --- --- 002637 00000 ------------ C 0.60 0.87 0.81 G 0.40 0.13 0.19 0000 --- --- --- --- 003520 00000 ------------ G 0.89 0.84 0.87 C 0.11 0.16 0.13 0000 --- --- --- --- 003681 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003846 00000 ------------ A 0.71 0.43 0.58 G 0.29 0.57 0.42 0000 --- --- --- --- 004223 00000 ------------ C 0.85 0.38 0.56 T 0.15 0.62 0.44 0000 --- --- --- --- 004303 00000 ------------ T 0.95 0.59 0.72 G 0.05 0.41 0.28 0000 --- --- --- --- 004311 00000 ------------ - 0.50 0.65 0.57 + 0.50 0.35 0.43 0000 --- --- --- --- 004432 00000 ------------ T 0.79 1.00 0.89 G 0.21 0.00 0.11 0000 --- --- --- --- 004483 00000 ------------ C 0.48 0.86 0.66 T 0.52 0.14 0.34 0000 --- --- --- --- 004642 00000 ------------ T 0.67 0.86 0.76 C 0.33 0.14 0.24 0000 --- --- --- --- 004734 00000 ------------ C 0.81 0.32 0.58 G 0.19 0.68 0.42 0000 --- --- --- --- 004754 00000 ------------ T 0.83 0.36 0.61 G 0.17 0.64 0.39 0000 --- --- --- --- 004981 00000 ------------ G 0.85 0.36 0.62 T 0.15 0.64 0.38 0000 --- --- --- --- 004999 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 005101 00000 ------------ A 0.98 0.95 0.97 G 0.02 0.05 0.03 0000 --- --- --- --- 005240 00000 ------------ G 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 005339 00000 ------------ C 0.85 0.84 0.85 T 0.15 0.16 0.15 0000 --- --- --- --- 005340 00000 ------------ G 0.81 0.34 0.59 A 0.19 0.66 0.41 0000 --- --- --- --- 005367 00000 ------------ T 0.85 0.84 0.85 C 0.15 0.16 0.15 0000 --- --- --- --- 005770 00000 ------------ A 0.96 0.57 0.77 C 0.04 0.43 0.23 0000 --- --- --- --- 005813 00000 ------------ G 0.80 0.80 0.80 A 0.20 0.20 0.20 0000 --- --- --- --- 005828 00000 ------------ C 0.78 1.00 0.89 G 0.22 0.00 0.11 0000 --- --- --- --- 005843 00000 ------------ G 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 005956 00000 ------------ T 0.54 0.80 0.67 G 0.46 0.20 0.33 0000 --- --- --- --- 006042 00000 ------------ T 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 006100 00000 ------------ T 1.00 0.55 0.78 C 0.00 0.45 0.22 0000 --- --- --- --- 006113 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006163 00000 ------------ T 0.88 0.84 0.86 C 0.12 0.16 0.14 0000 --- --- --- --- 006299 00000 ------------ A 0.50 0.79 0.63 G 0.50 0.21 0.37 0000 --- --- --- --- 007338 00000 ------------ A 1.00 0.57 0.80 G 0.00 0.43 0.20 0000 --- --- --- --- 010379 00000 ------------ C 1.00 0.92 0.96 T 0.00 0.08 0.04 0000 --- --- --- --- 010634 00000 ------------ G 0.97 0.97 0.97 A 0.03 0.03 0.03 0000 --- --- --- --- 011085 00000 ------------ G 0.63 0.76 0.70 C 0.37 0.24 0.30 0000 --- --- --- --- 011088 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 017738 00000 ------------ C 0.89 0.98 0.93 A 0.11 0.02 0.07 0000 --- --- --- --- 017830 00000 ------------ A 0.67 0.74 0.70 G 0.33 0.26 0.30 0000 --- --- --- --- 018399 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 018415 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 018458 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018472 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018477 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018536 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018641 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018817 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 018832 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018854 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018962 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 020273 00000 ------------ A 0.70 0.50 0.60 G 0.30 0.50 0.40 0000 --- --- --- --- 020307 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020409 00000 ------------ G 0.32 0.93 0.62 A 0.68 0.07 0.38 0000 --- --- --- --- 020412 00000 ------------ A 0.91 0.55 0.73 G 0.09 0.45 0.27 0000 --- --- --- --- 020774 00000 ------------ G 0.76 0.98 0.87 A 0.24 0.02 0.13 0000 --- --- --- --- 020843 00000 ------------ A 0.78 0.98 0.88 C 0.22 0.02 0.12 0000 --- --- --- --- 020845 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020877 00000 ------------ A 0.80 0.98 0.89 G 0.20 0.02 0.11 0000 --- --- --- --- 021223 00000 ------------ A 0.74 0.58 0.66 G 0.26 0.42 0.34 0000 --- --- --- --- 021236 00000 ------------ T 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 021260 00000 ------------ T 0.55 0.53 0.54 C 0.45 0.47 0.46 0000 --- --- --- --- 021489 00000 ------------ A 0.86 1.00 0.93 G 0.14 0.00 0.07 0000 --- --- --- --- 021778 00000 ------------ C 0.81 0.74 0.77 G 0.19 0.26 0.23 0000 --- --- --- --- 022732 00000 ------------ G 0.87 0.63 0.75 A 0.13 0.37 0.25 0000 --- --- --- --- 022761 00000 ------------ T 0.79 0.61 0.70 A 0.21 0.39 0.30 0000 --- --- --- --- 022775 00000 ------------ G 0.58 0.66 0.62 A 0.42 0.34 0.38 0000 --- --- --- --- 022846 00000 ------------ G 0.89 0.64 0.77 A 0.11 0.36 0.23 0000 --- --- --- --- 022879 00000 ------------ G 1.00 0.92 0.96 A 0.00 0.08 0.04 0000 --- --- --- --- 023037 00000 ------------ C 1.00 0.88 0.94 G 0.00 0.12 0.06 0000 --- --- --- --- 023822 00000 ------------ - 0.17 0.09 0.13 + 0.83 0.91 0.87 0000 --- --- --- --- 023829 00000 ------------ C 0.95 0.95 0.95 T 0.05 0.05 0.05 0000 --- --- --- --- 023842 00000 ------------ A 0.95 0.93 0.94 C 0.05 0.07 0.06 0000 --- --- --- --- 023849 00000 ------------ T 0.55 0.76 0.65 C 0.45 0.24 0.35 0000 --- --- --- --- 023897 00000 ------------ T 1.00 0.64 0.83 C 0.00 0.36 0.17 0000 --- --- --- --- 024689 00000 ------------ A 0.92 0.91 0.91 G 0.08 0.09 0.09 0000 --- --- --- --- 024743 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 024747 00000 ------------ G 1.00 0.65 0.83 A 0.00 0.35 0.17 0000 --- --- --- --- 024860 00000 ------------ G 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 027207 00136 5' UTR - 0.88 0.93 0.90 + 0.12 0.07 0.10 0000 --- --- --- --- 027421 00000 ------------ G 1.00 0.90 0.95 A 0.00 0.10 0.05 0000 --- --- --- --- 027434 00000 ------------ C 0.98 0.62 0.82 T 0.02 0.38 0.18 0000 --- --- --- --- 027556 00000 ------------ - 0.00 0.05 0.02 + 1.00 0.95 0.98 0000 --- --- --- --- 027579 00000 ------------ - 0.00 0.38 0.18 + 1.00 0.62 0.82 0000 --- --- --- --- 027598 00000 ------------ G 0.52 0.66 0.59 A 0.48 0.34 0.41 0000 --- --- --- --- 027957 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028043 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 028063 00000 ------------ C 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 028097 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 028243 00000 ------------ T 0.72 0.89 0.80 A 0.28 0.11 0.20 0000 --- --- --- --- 028501 00000 ------------ A 0.87 0.91 0.89 T 0.13 0.09 0.11 0000 --- --- --- --- 028528 00000 ------------ G 0.98 0.57 0.78 T 0.02 0.43 0.22 0000 --- --- --- --- 028546 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 028928 00362 NON-SYN A 0.50 0.65 0.58 G 0.50 0.35 0.42 0037 ATG GTG MET(M) VAL(V) 029119 00553 SYNON G 0.91 0.98 0.95 C 0.09 0.02 0.05 0100 TCG TCC SER(S) SER(S) 029260 00694 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0147 CGG CGA ARG(R) ARG(R) 029307 00741 NON-SYN A 0.96 1.00 0.98 G 0.04 0.00 0.02 0163 CAG CGG GLN(Q) ARG(R) 029488 00922 SYNON C 0.92 1.00 0.96 T 0.08 0.00 0.04 0223 TTC TTT PHE(F) PHE(F) 029722 01156 SYNON G 0.96 0.57 0.77 C 0.04 0.43 0.23 0301 CCG CCC PRO(P) PRO(P) 029806 01240 SYNON G 0.52 0.61 0.57 A 0.48 0.39 0.43 0329 ACG ACA THR(T) THR(T) 030178 01612 3' UTR G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 030228 01662 3' UTR G 1.00 0.74 0.87 A 0.00 0.26 0.13 0000 --- --- --- --- 030271 01705 3' UTR G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 030277 01711 3' UTR A 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 030314 01748 3' UTR C 0.94 0.93 0.94 A 0.06 0.07 0.06 0000 --- --- --- --- 030342 01776 3' UTR G 0.96 0.91 0.94 A 0.04 0.09 0.06 0000 --- --- --- --- 030364 01798 3' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 030374 01808 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030408 01842 3' UTR - 1.00 0.74 0.87 + 0.00 0.26 0.13 0000 --- --- --- --- 030517 01951 3' UTR G 0.54 0.67 0.61 A 0.46 0.33 0.39 0000 --- --- --- --- 030603 02037 3' UTR A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 030700 00000 ------------ C 0.52 0.67 0.60 T 0.48 0.33 0.40 0000 --- --- --- --- 030768 00000 ------------ G 0.74 0.89 0.82 A 0.26 0.11 0.18 0000 --- --- --- --- 030776 00000 ------------ C 0.93 0.98 0.96 T 0.07 0.02 0.04 0000 --- --- --- --- 030924 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 030925 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 030997 00000 ------------ G 0.52 0.65 0.59 A 0.48 0.35 0.41 0000 --- --- --- --- 031065 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 031134 00000 ------------ C 0.94 0.67 0.81 T 0.06 0.33 0.19 0000 --- --- --- --- 031158 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 031753 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031763 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 031785 00000 ------------ C 0.96 0.55 0.76 T 0.04 0.45 0.24 0000 --- --- --- --- 031882 00000 ------------ G 0.95 0.55 0.75 A 0.05 0.45 0.25 0000 --- --- --- --- 032328 00000 ------------ T 0.95 0.55 0.76 C 0.05 0.45 0.24 0000 --- --- --- --- NOTE: ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000995: TGGGG 001352: C 001863: GGCCGCCGCGCC 001899: GGGCCCCGCTGTCCGCCGCCCGCCG 002477: CTCAGAAGCGGGAAGGGCGAGGATTTGGACCTG 004311: C 023822: GACGTT 027207: C 027556: TT 027579: CT 030408: G Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000023 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000316 00000 ------------ C 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 000356 00000 ------------ T 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 000466 00000 ------------ C 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 000497 00000 ------------ C 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 000529 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000674 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002420 00000 ------------ A 0.75 1.00 0.88 C 0.25 0.00 0.12 0000 --- --- --- --- 009839 00000 ------------ G 0.60 1.00 0.77 A 0.40 0.00 0.23 0000 --- --- --- --- 010104 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 010213 00000 ------------ T 0.48 1.00 0.74 C 0.52 0.00 0.26 0000 --- --- --- --- 010991 00000 ------------ G 0.77 1.00 0.88 A 0.23 0.00 0.12 0000 --- --- --- --- 011251 00066 5' UTR C 0.76 1.00 0.88 T 0.24 0.00 0.12 0000 --- --- --- --- 011739 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012171 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 012304 00229 5' UTR C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012381 00306 5' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012399 00324 5' UTR C 0.79 1.00 0.89 G 0.21 0.00 0.11 0000 --- --- --- --- 012466 00391 5' UTR G 0.75 1.00 0.87 A 0.25 0.00 0.13 0000 --- --- --- --- 012606 00531 5' UTR C 0.82 1.00 0.93 G 0.18 0.00 0.07 0000 --- --- --- --- 012618 00000 ------------ T 0.82 1.00 0.93 A 0.18 0.00 0.07 0000 --- --- --- --- 012766 00000 ------------ G 0.85 1.00 0.94 A 0.15 0.00 0.06 0000 --- --- --- --- 012930 00000 ------------ - 0.82 1.00 0.91 + 0.18 0.00 0.09 0000 --- --- --- --- 013011 00000 ------------ T 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 013519 00000 ------------ T 0.78 1.00 0.89 C 0.23 0.00 0.11 0000 --- --- --- --- 013555 00000 ------------ G 0.78 1.00 0.89 A 0.23 0.00 0.11 0000 --- --- --- --- 013714 00000 ------------ G 0.78 1.00 0.89 A 0.23 0.00 0.11 0000 --- --- --- --- 013849 00000 ------------ G 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 014076 00000 ------------ A 0.75 1.00 0.87 G 0.25 0.00 0.13 0000 --- --- --- --- 014082 00000 ------------ C 0.46 1.00 0.72 T 0.54 0.00 0.28 0000 --- --- --- --- 014138 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 014319 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014357 00000 ------------ G 0.75 0.98 0.86 A 0.25 0.02 0.14 0000 --- --- --- --- 014700 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015102 00000 ------------ A 0.46 1.00 0.72 G 0.54 0.00 0.28 0000 --- --- --- --- 015539 00000 ------------ A 0.71 0.97 0.83 C 0.29 0.03 0.17 0000 --- --- --- --- 015957 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 016032 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 016166 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 016167 00000 ------------ C 0.77 1.00 0.88 G 0.23 0.00 0.12 0000 --- --- --- --- 016209 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 016301 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 016451 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016514 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 016629 00977 NON-SYN A 0.98 1.00 0.99 C 0.02 0.00 0.01 0140 AAC CAC ASN(N) HIS(H) 016700 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 016777 00000 ------------ G 0.75 1.00 0.88 A 0.25 0.00 0.12 0000 --- --- --- --- 016858 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 017136 00000 ------------ A 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 017277 00000 ------------ T 0.43 1.00 0.72 G 0.57 0.00 0.28 0000 --- --- --- --- 017579 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018737 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018880 00000 ------------ C 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- 018909 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 019035 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 019108 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 019559 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 021112 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021213 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021289 01240 SYNON C 1.00 0.96 0.98 T 0.00 0.04 0.02 0227 GCC GCT ALA(A) ALA(A) 021445 01396 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0279 GCC GCT ALA(A) ALA(A) 022269 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022476 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 023185 00000 ------------ G 0.75 0.83 0.79 A 0.25 0.17 0.21 0000 --- --- --- --- 023554 00000 ------------ C 0.79 0.85 0.82 A 0.21 0.15 0.18 0000 --- --- --- --- 023618 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 023639 00000 ------------ C 0.92 0.93 0.93 T 0.08 0.07 0.07 0000 --- --- --- --- 023727 01618 SYNON C 0.93 0.93 0.93 T 0.07 0.07 0.07 0353 TTC TTT PHE(F) PHE(F) 023837 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023849 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 023873 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 024314 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 024320 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 024322 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 031176 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 031295 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 031836 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031903 00000 ------------ C 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 032303 00000 ------------ C 0.65 0.72 0.68 T 0.35 0.28 0.32 0000 --- --- --- --- 032750 00000 ------------ G 1.00 0.75 0.88 A 0.00 0.25 0.12 0000 --- --- --- --- 033844 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 037251 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 040404 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 040470 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 040537 00000 ------------ G 0.83 0.78 0.80 A 0.17 0.22 0.20 0000 --- --- --- --- 041303 00000 ------------ C 0.98 0.65 0.82 A 0.02 0.35 0.18 0000 --- --- --- --- 041357 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 041420 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 041692 00000 ------------ A 0.77 0.39 0.59 G 0.23 0.61 0.41 0000 --- --- --- --- 041796 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 041862 00000 ------------ - 0.33 0.67 0.50 + 0.67 0.33 0.50 0000 --- --- --- --- 042535 02314 SYNON C 0.94 0.78 0.86 G 0.06 0.22 0.14 0585 CCC CCG PRO(P) PRO(P) 042746 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 042834 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 042855 00000 ------------ G 0.65 0.59 0.62 C 0.35 0.41 0.38 0000 --- --- --- --- 042871 00000 ------------ - 0.04 0.39 0.21 + 0.96 0.61 0.79 0000 --- --- --- --- 043124 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 044024 00000 ------------ A 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 045354 02855 NON-SYN C 1.00 0.98 0.99 T 0.00 0.02 0.01 0766 CCG TCG PRO(P) SER(S) 045398 02899 SYNON C 0.96 1.00 0.98 T 0.04 0.00 0.02 0780 CAC CAT HIS(H) HIS(H) 045586 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 045675 00000 ------------ A 0.96 0.61 0.79 G 0.04 0.39 0.21 0000 --- --- --- --- 046524 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 048297 00000 ------------ A 0.96 0.61 0.78 G 0.04 0.39 0.22 0000 --- --- --- --- 048330 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 048750 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 049374 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 050080 00000 ------------ G 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 051350 00000 ------------ A 0.94 0.78 0.86 G 0.06 0.22 0.14 0000 --- --- --- --- 051435 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 051669 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 053071 00000 ------------ C 0.59 0.64 0.61 T 0.41 0.36 0.39 0000 --- --- --- --- 054006 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 054040 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 054670 00000 ------------ A 1.00 0.57 0.80 G 0.00 0.43 0.20 0000 --- --- --- --- 054771 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 055162 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 055338 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 055927 00000 ------------ - 0.08 0.00 0.04 + 0.92 1.00 0.96 0000 --- --- --- --- 056040 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 056355 00000 ------------ C 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 056510 00000 ------------ A 0.40 0.76 0.57 T 0.60 0.24 0.43 0000 --- --- --- --- 056901 00000 ------------ G 1.00 0.61 0.81 T 0.00 0.39 0.19 0000 --- --- --- --- 058237 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 059634 04675 SYNON C 0.59 0.98 0.78 T 0.41 0.02 0.22 1372 AGC AGT SER(S) SER(S) 062175 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 062274 00000 ------------ T 0.55 0.82 0.68 C 0.45 0.18 0.32 0000 --- --- --- --- 063723 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 063788 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 063843 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 063945 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 064097 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 064397 05682 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 065145 06430 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 065204 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 065893 00000 ------------ G 0.71 1.00 0.84 T 0.29 0.00 0.16 0000 --- --- --- --- 065954 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 066022 00000 ------------ T 1.00 0.71 0.87 C 0.00 0.29 0.13 0000 --- --- --- --- 066761 00000 ------------ C 0.41 0.64 0.52 T 0.59 0.36 0.48 0000 --- --- --- --- 066773 00000 ------------ C 0.75 1.00 0.88 T 0.25 0.00 0.12 0000 --- --- --- --- 066881 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 066913 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 012930: T 015957: CCTTGCT 041862: ACCCCCAGGGACCCCTGCCCTCCTCACCGCCTCTGTCCGTGAATGCAGGGGG 042871: TGCATCTCCCCAGCTACGTCAAGGAGAGGTTCCTCTTACCAGAAACTCGCTGGCCGTGGTCGGCCTCCCGCCAGGAGCCCTGCATCTCCCCAGCTACGTCAAGGAGAGGTTCCTCTCACCAGAACCTTGCTGGCCGTGGTCGGCCTCCCGCCAGGAGCCCTGCATCTCCCCAGCTACGTCAAGGAGAGGTTCCTCTCACCAGAACCTCGCTGGCCAGGGTCGGCCTCCCGCCAGGAGCCCTGCATCTCCC 046524: T 055927: TGG Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000539 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000568 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000739 00000 ------------ G 0.46 0.91 0.68 A 0.54 0.09 0.32 0000 --- --- --- --- 000790 00000 ------------ A 0.65 0.91 0.78 G 0.35 0.09 0.22 0000 --- --- --- --- 000857 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001059 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001150 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001199 00000 ------------ C 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 001577 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001660 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001720 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001831 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002121 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 002268 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 002405 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002665 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003125 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003320 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003581 00000 ------------ T 1.00 0.63 0.82 C 0.00 0.37 0.18 0000 --- --- --- --- 003978 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004070 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004507 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 004566 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 004605 00000 ------------ - 0.92 0.98 0.95 + 0.08 0.02 0.05 0000 --- --- --- --- 004606 00000 ------------ A 0.81 0.98 0.89 T 0.19 0.02 0.11 0000 --- --- --- --- 005183 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005197 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005272 00000 ------------ T 0.92 0.85 0.88 C 0.08 0.15 0.12 0000 --- --- --- --- 005514 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005597 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005608 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005643 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005746 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006026 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 006281 00000 ------------ G 1.00 0.63 0.82 A 0.00 0.37 0.18 0000 --- --- --- --- 006305 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 006410 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 007702 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007734 00000 ------------ A 1.00 0.61 0.81 G 0.00 0.39 0.19 0000 --- --- --- --- 007864 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 008026 00189 SYNON G 1.00 0.98 0.99 A 0.00 0.02 0.01 0027 AAG AAA LYS(K) LYS(K) 008592 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008670 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 008842 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009441 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 009686 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 009689 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009815 00000 ------------ G 1.00 0.89 0.94 T 0.00 0.11 0.06 0000 --- --- --- --- 010697 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 010725 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 010841 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011169 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 011467 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011661 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011925 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012992 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013069 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 013268 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 013777 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 013808 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 014111 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 014674 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 014857 00000 ------------ T 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 015323 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015787 00834 SYNON G 0.95 1.00 0.98 A 0.05 0.00 0.02 0242 GAG GAA GLU(E) GLU(E) 016095 00000 ------------ T 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 016193 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 016644 00000 ------------ A 1.00 0.63 0.80 T 0.00 0.37 0.20 0000 --- --- --- --- 016744 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 016995 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 017049 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017077 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017481 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018418 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 018769 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 019223 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 019701 00000 ------------ G 1.00 0.90 0.95 A 0.00 0.10 0.05 0000 --- --- --- --- 020328 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 020485 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 020962 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 021231 00000 ------------ - 0.00 0.38 0.17 + 1.00 0.62 0.83 0000 --- --- --- --- 021820 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 022115 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 022248 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 022262 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022596 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 022696 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022758 00000 ------------ C 1.00 0.65 0.83 T 0.00 0.35 0.17 0000 --- --- --- --- 023239 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 023313 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 023805 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 023890 00000 ------------ C 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 024059 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024072 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 024093 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 024827 00000 ------------ G 1.00 0.89 0.95 C 0.00 0.11 0.05 0000 --- --- --- --- 025568 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 026775 01509 SYNON A 0.98 1.00 0.99 G 0.02 0.00 0.01 0467 CTA CTG LEU(L) LEU(L) 026799 01533 SYNON C 0.94 1.00 0.97 T 0.06 0.00 0.03 0475 TGC TGT CYS(C) CYS(C) 026907 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 026926 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 028141 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 028150 00000 ------------ T 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 028316 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 028520 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 029010 00000 ------------ A 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 029391 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 029953 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 030316 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 030505 00000 ------------ G 0.90 0.86 0.88 A 0.10 0.14 0.12 0000 --- --- --- --- 030936 00000 ------------ T 1.00 0.61 0.80 C 0.00 0.39 0.20 0000 --- --- --- --- 030965 00000 ------------ G 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 030991 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 031200 02001 3' UTR C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 031703 02504 3' UTR G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 032165 02966 3' UTR C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 032304 03105 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 032742 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 032885 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 033021 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 033556 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 033890 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 034097 00000 ------------ - 0.92 1.00 0.96 + 0.08 0.00 0.04 0000 --- --- --- --- 034440 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 034502 00000 ------------ C 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002268: AACCTGCTGGAGAGG 004605: A 013268: GT 021231: GCAGTATTACTGTAGT 021820: TT 023313: TATA 024072: T 026926: GTAT 032742: A 033556: AATA 034097: TGAT 034440: TG Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000164 00000 ------------ - 0.13 0.23 0.18 + 0.87 0.77 0.82 0000 --- --- --- --- 000322 00000 ------------ G 0.85 0.77 0.82 A 0.15 0.23 0.18 0000 --- --- --- --- 000450 00000 ------------ G 0.98 0.89 0.93 A 0.02 0.11 0.07 0000 --- --- --- --- 000497 00000 ------------ G 0.61 0.84 0.72 A 0.39 0.16 0.28 0000 --- --- --- --- 000690 00000 ------------ G 0.88 0.77 0.83 A 0.12 0.23 0.17 0000 --- --- --- --- 000974 00000 ------------ C 0.88 0.82 0.85 G 0.12 0.18 0.15 0000 --- --- --- --- 001035 00000 ------------ C 0.46 0.68 0.56 T 0.54 0.32 0.44 0000 --- --- --- --- 001244 00000 ------------ A 0.90 0.89 0.90 G 0.10 0.11 0.10 0000 --- --- --- --- 001435 00000 ------------ - 0.08 0.03 0.05 + 0.92 0.97 0.95 0000 --- --- --- --- 001605 00000 ------------ G 0.86 0.79 0.82 T 0.14 0.21 0.18 0000 --- --- --- --- 001852 00000 ------------ C 0.85 0.79 0.82 T 0.15 0.21 0.18 0000 --- --- --- --- 002054 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 002494 00000 ------------ G 0.97 0.95 0.96 A 0.03 0.05 0.04 0000 --- --- --- --- 002566 00000 ------------ C 0.60 0.57 0.59 T 0.40 0.43 0.41 0000 --- --- --- --- 002584 00000 ------------ A 0.60 0.57 0.59 G 0.40 0.43 0.41 0000 --- --- --- --- 002647 00000 ------------ C 0.82 0.81 0.82 T 0.17 0.19 0.18 0000 --- --- --- --- 002671 00000 ------------ C 1.00 0.88 0.94 T 0.00 0.12 0.06 0000 --- --- --- --- 002733 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 003168 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 003220 00000 ------------ C 0.89 0.85 0.87 T 0.11 0.15 0.13 0000 --- --- --- --- 003248 00000 ------------ G 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 003328 00000 ------------ C 0.61 0.50 0.56 T 0.39 0.50 0.44 0000 --- --- --- --- 003338 00000 ------------ - 0.93 0.84 0.89 + 0.07 0.16 0.11 0000 --- --- --- --- 003340 00000 ------------ - 0.05 0.15 0.10 + 0.95 0.85 0.90 0000 --- --- --- --- 003470 00000 ------------ C 0.61 0.52 0.57 T 0.39 0.48 0.43 0000 --- --- --- --- 003551 00000 ------------ A 0.50 0.70 0.60 G 0.50 0.30 0.40 0000 --- --- --- --- 003652 00000 ------------ C 0.89 0.84 0.87 T 0.11 0.16 0.13 0000 --- --- --- --- 003822 00000 ------------ A 0.53 0.74 0.63 G 0.47 0.26 0.37 0000 --- --- --- --- 003899 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 003901 00000 ------------ G 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 003953 00000 ------------ A 0.55 0.75 0.64 T 0.45 0.25 0.36 0000 --- --- --- --- 003955 00000 ------------ - 0.48 0.33 0.40 + 0.52 0.67 0.60 0000 --- --- --- --- 004403 00000 ------------ G 0.63 0.55 0.59 C 0.37 0.45 0.41 0000 --- --- --- --- 004404 00000 ------------ G 0.63 0.55 0.59 A 0.37 0.45 0.41 0000 --- --- --- --- 004642 00000 ------------ C 0.68 0.62 0.65 T 0.33 0.38 0.35 0000 --- --- --- --- 004683 00000 ------------ G 0.68 0.62 0.65 C 0.33 0.38 0.35 0000 --- --- --- --- 004820 00000 ------------ A 0.68 0.58 0.63 G 0.33 0.42 0.37 0000 --- --- --- --- 005016 00000 ------------ G 0.59 0.52 0.56 A 0.41 0.48 0.44 0000 --- --- --- --- 005051 00000 ------------ C 0.57 0.52 0.54 T 0.43 0.48 0.46 0000 --- --- --- --- 005228 00000 ------------ C 0.60 0.52 0.56 A 0.40 0.48 0.44 0000 --- --- --- --- 005296 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 005349 00000 ------------ A 0.64 0.54 0.59 G 0.36 0.46 0.41 0000 --- --- --- --- 005417 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 005499 00000 ------------ C 0.63 0.54 0.59 T 0.37 0.46 0.41 0000 --- --- --- --- 005757 00000 ------------ C 0.85 0.54 0.70 T 0.15 0.46 0.30 0000 --- --- --- --- 005892 00000 ------------ G 0.44 0.70 0.56 A 0.56 0.30 0.44 0000 --- --- --- --- 006040 00000 ------------ G 0.83 0.55 0.70 A 0.17 0.45 0.30 0000 --- --- --- --- 006132 00000 ------------ C 0.75 0.75 0.75 A 0.25 0.25 0.25 0000 --- --- --- --- 006312 00000 ------------ G 0.74 0.75 0.74 A 0.26 0.25 0.26 0000 --- --- --- --- 007565 00000 ------------ T 0.44 0.72 0.57 A 0.56 0.28 0.43 0000 --- --- --- --- 007578 00000 ------------ T 0.44 0.72 0.57 C 0.56 0.28 0.43 0000 --- --- --- --- 007809 00000 ------------ G 0.43 0.72 0.58 A 0.57 0.28 0.42 0000 --- --- --- --- 007931 00000 ------------ G 0.45 0.70 0.58 A 0.55 0.30 0.42 0000 --- --- --- --- 007994 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 008055 00000 ------------ C 0.39 0.70 0.56 T 0.61 0.30 0.44 0000 --- --- --- --- 008080 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 008089 00000 ------------ C 0.39 0.70 0.56 T 0.61 0.30 0.44 0000 --- --- --- --- 008176 00000 ------------ G 0.39 0.70 0.56 A 0.61 0.30 0.44 0000 --- --- --- --- 008360 00000 ------------ C 0.84 0.76 0.80 A 0.16 0.24 0.20 0000 --- --- --- --- 008409 00000 ------------ T 0.82 1.00 0.92 C 0.18 0.00 0.08 0000 --- --- --- --- 008423 00000 ------------ C 0.84 0.54 0.68 T 0.16 0.46 0.32 0000 --- --- --- --- 008515 00000 ------------ T 0.76 0.76 0.76 C 0.24 0.24 0.24 0000 --- --- --- --- 008595 00000 ------------ T 0.85 1.00 0.93 C 0.15 0.00 0.07 0000 --- --- --- --- 008622 00000 ------------ A 0.44 0.70 0.56 G 0.56 0.30 0.44 0000 --- --- --- --- 008740 00000 ------------ C 0.44 0.70 0.56 T 0.56 0.30 0.44 0000 --- --- --- --- 008741 00000 ------------ A 0.44 0.70 0.56 G 0.56 0.30 0.44 0000 --- --- --- --- 008752 00000 ------------ T 0.44 0.70 0.56 C 0.56 0.30 0.44 0000 --- --- --- --- 008765 00000 ------------ A 0.44 0.70 0.56 T 0.56 0.30 0.44 0000 --- --- --- --- 008939 00000 ------------ T 0.73 0.76 0.74 C 0.27 0.24 0.26 0000 --- --- --- --- 008990 00000 ------------ T 0.83 0.54 0.69 A 0.17 0.46 0.31 0000 --- --- --- --- 009607 00000 ------------ T 0.44 0.74 0.58 C 0.56 0.26 0.42 0000 --- --- --- --- 009677 00000 ------------ G 0.44 0.74 0.58 A 0.56 0.26 0.42 0000 --- --- --- --- 009837 00000 ------------ C 0.43 0.71 0.57 T 0.57 0.29 0.43 0000 --- --- --- --- 010049 00000 ------------ T 0.44 0.70 0.56 A 0.56 0.30 0.44 0000 --- --- --- --- 010585 00000 ------------ T 0.88 0.82 0.85 G 0.12 0.18 0.15 0000 --- --- --- --- 010693 00000 ------------ C 0.48 0.68 0.57 T 0.52 0.33 0.43 0000 --- --- --- --- 010735 00000 ------------ T 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 010831 00000 ------------ A 0.48 0.68 0.57 C 0.52 0.33 0.43 0000 --- --- --- --- 010845 00000 ------------ T 0.45 0.68 0.56 G 0.55 0.33 0.44 0000 --- --- --- --- 010863 00000 ------------ G 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 011048 00000 ------------ G 0.73 0.76 0.74 C 0.27 0.24 0.26 0000 --- --- --- --- 011178 00000 ------------ G 0.90 0.85 0.87 A 0.10 0.15 0.13 0000 --- --- --- --- 011356 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 011863 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011912 00000 ------------ A 0.73 0.75 0.74 G 0.27 0.25 0.26 0000 --- --- --- --- 012470 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012534 00000 ------------ G 0.77 0.74 0.76 A 0.23 0.26 0.24 0000 --- --- --- --- 012585 00000 ------------ A 0.70 0.74 0.72 G 0.30 0.26 0.28 0000 --- --- --- --- 012879 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 013096 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 013136 00000 ------------ - 0.11 0.30 0.21 + 0.89 0.70 0.79 0000 --- --- --- --- 013297 00000 ------------ A 0.85 0.54 0.70 G 0.15 0.46 0.30 0000 --- --- --- --- 013357 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 013434 00000 ------------ G 0.72 0.76 0.74 A 0.28 0.24 0.26 0000 --- --- --- --- 013754 00000 ------------ G 0.85 0.54 0.70 A 0.15 0.46 0.30 0000 --- --- --- --- 013786 00000 ------------ G 0.44 0.68 0.55 T 0.56 0.32 0.45 0000 --- --- --- --- 014041 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014177 00000 ------------ C 0.78 1.00 0.89 T 0.22 0.00 0.11 0000 --- --- --- --- 014274 00000 ------------ - 0.09 0.17 0.12 + 0.91 0.83 0.88 0000 --- --- --- --- 014275 00000 ------------ A 0.87 0.59 0.74 G 0.13 0.41 0.26 0000 --- --- --- --- 014393 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 014468 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 014567 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 014700 00000 ------------ - 0.82 0.54 0.67 + 0.17 0.46 0.33 0000 --- --- --- --- 014735 00000 ------------ T 0.81 0.52 0.67 C 0.19 0.48 0.33 0000 --- --- --- --- 014823 00000 ------------ G 0.81 0.52 0.67 A 0.19 0.48 0.33 0000 --- --- --- --- 014927 00000 ------------ A 0.73 0.76 0.74 C 0.27 0.24 0.26 0000 --- --- --- --- 015115 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 015195 00000 ------------ A 0.62 0.81 0.72 C 0.38 0.19 0.28 0000 --- --- --- --- 015395 00000 ------------ G 0.78 1.00 0.89 A 0.23 0.00 0.11 0000 --- --- --- --- 015406 00000 ------------ A 0.95 0.77 0.86 G 0.05 0.23 0.14 0000 --- --- --- --- 015628 00000 ------------ - 0.88 1.00 0.94 + 0.12 0.00 0.06 0000 --- --- --- --- 015913 00000 ------------ C 0.83 0.57 0.70 T 0.17 0.43 0.30 0000 --- --- --- --- 015920 00000 ------------ C 0.83 0.57 0.70 G 0.17 0.43 0.30 0000 --- --- --- --- 015947 00000 ------------ C 0.43 0.69 0.56 T 0.57 0.31 0.44 0000 --- --- --- --- 015988 00000 ------------ T 0.41 0.68 0.54 C 0.59 0.32 0.46 0000 --- --- --- --- 016090 00000 ------------ C 0.85 0.57 0.71 A 0.15 0.43 0.29 0000 --- --- --- --- 016280 00103 NON-SYN G 0.93 1.00 0.97 A 0.07 0.00 0.03 0035 GGG AGG GLY(G) ARG(R) 016283 00106 NON-SYN G 0.74 0.75 0.74 T 0.26 0.25 0.26 0036 GTC TTC VAL(V) PHE(F) 016373 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016460 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 016531 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016537 00000 ------------ C 0.81 0.76 0.79 T 0.19 0.24 0.21 0000 --- --- --- --- 016709 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016731 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016811 00000 ------------ C 0.75 0.76 0.76 T 0.25 0.24 0.24 0000 --- --- --- --- 016857 00000 ------------ A 0.75 0.76 0.76 T 0.25 0.24 0.24 0000 --- --- --- --- 016907 00000 ------------ C 0.83 0.54 0.69 T 0.17 0.46 0.31 0000 --- --- --- --- 017190 00000 ------------ C 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 017301 00000 ------------ T 0.73 0.76 0.74 C 0.27 0.24 0.26 0000 --- --- --- --- 017395 00000 ------------ A 0.74 0.76 0.75 G 0.26 0.24 0.25 0000 --- --- --- --- 017502 00000 ------------ C 0.95 0.84 0.90 T 0.05 0.16 0.10 0000 --- --- --- --- 017548 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 017576 00000 ------------ C 0.74 0.79 0.76 T 0.26 0.21 0.24 0000 --- --- --- --- 017610 00000 ------------ T 0.74 0.75 0.74 C 0.26 0.25 0.26 0000 --- --- --- --- 017689 00000 ------------ C 0.73 0.76 0.74 T 0.27 0.24 0.26 0000 --- --- --- --- 017816 00188 NON-SYN G 0.75 0.76 0.76 A 0.25 0.24 0.24 0063 CGC CAC ARG(R) HIS(H) 017817 00189 SYNON C 0.81 0.76 0.79 T 0.19 0.24 0.21 0063 CGC CGT ARG(R) ARG(R) 017833 EXON7 +2 SPLICE - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 017859 00000 ------------ G 0.73 0.76 0.74 C 0.27 0.24 0.26 0000 --- --- --- --- 017904 00000 ------------ - 0.75 0.77 0.76 + 0.25 0.23 0.24 0000 --- --- --- --- 017946 00000 ------------ C 0.98 0.95 0.97 A 0.02 0.05 0.03 0000 --- --- --- --- 017958 00000 ------------ C 0.75 0.77 0.76 T 0.25 0.23 0.24 0000 --- --- --- --- 018007 00000 ------------ G 0.75 0.77 0.76 A 0.25 0.23 0.24 0000 --- --- --- --- 018059 00000 ------------ A 0.73 0.77 0.75 G 0.27 0.23 0.25 0000 --- --- --- --- 018060 00000 ------------ A 0.73 0.77 0.75 C 0.27 0.23 0.25 0000 --- --- --- --- 018071 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018190 00000 ------------ T 0.75 0.77 0.76 G 0.25 0.23 0.24 0000 --- --- --- --- 018517 00000 ------------ A 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 018582 00000 ------------ T 0.73 0.74 0.73 G 0.27 0.26 0.27 0000 --- --- --- --- 019020 00000 ------------ C 0.81 0.76 0.79 T 0.19 0.24 0.21 0000 --- --- --- --- 019311 00000 ------------ G 0.74 0.76 0.75 A 0.26 0.24 0.25 0000 --- --- --- --- 019340 00000 ------------ T 0.74 0.76 0.75 C 0.26 0.24 0.25 0000 --- --- --- --- 019355 00000 ------------ T 0.74 0.76 0.75 G 0.26 0.24 0.25 0000 --- --- --- --- 019467 00000 ------------ - 0.74 0.76 0.75 + 0.26 0.24 0.25 0000 --- --- --- --- 019523 00000 ------------ T 0.83 0.56 0.69 C 0.17 0.44 0.31 0000 --- --- --- --- 019548 00220 NON-SYN C 0.88 0.86 0.87 T 0.12 0.14 0.13 0074 CCA TCA PRO(P) SER(S) 019670 00000 ------------ - 0.80 0.70 0.75 + 0.20 0.30 0.25 0000 --- --- --- --- 019876 00000 ------------ C 0.76 0.70 0.73 T 0.24 0.30 0.27 0000 --- --- --- --- 019906 00000 ------------ G 0.90 0.57 0.74 A 0.10 0.42 0.26 0000 --- --- --- --- 019989 00000 ------------ C 0.72 1.00 0.86 A 0.28 0.00 0.14 0000 --- --- --- --- 020020 00000 ------------ C 0.76 0.74 0.75 A 0.24 0.26 0.25 0000 --- --- --- --- 020097 00000 ------------ G 0.75 0.72 0.74 A 0.25 0.28 0.26 0000 --- --- --- --- 020146 00261 FRAME SHIFT - 0.70 0.68 0.69 + 0.30 0.32 0.31 0087 GT- GTG --- --- 020182 00297 SYNON A 0.52 0.75 0.64 G 0.48 0.25 0.36 0099 ACA ACG THR(T) THR(T) 020203 00318 SYNON C 0.75 1.00 0.88 T 0.25 0.00 0.12 0106 AAC AAT ASN(N) ASN(N) 020301 00000 ------------ G 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 020348 00000 ------------ T 0.83 0.76 0.80 A 0.17 0.24 0.20 0000 --- --- --- --- 020419 00000 ------------ - 0.08 0.00 0.04 + 0.92 1.00 0.96 0000 --- --- --- --- 020422 00000 ------------ T 0.52 0.76 0.64 C 0.48 0.24 0.36 0000 --- --- --- --- 020424 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 020438 00000 ------------ C 0.77 1.00 0.88 T 0.23 0.00 0.12 0000 --- --- --- --- 020447 00000 ------------ G 0.79 0.76 0.78 A 0.21 0.24 0.22 0000 --- --- --- --- 020485 00000 ------------ C 0.83 0.76 0.80 T 0.17 0.24 0.20 0000 --- --- --- --- 020494 00000 ------------ C 0.75 0.76 0.76 G 0.25 0.24 0.24 0000 --- --- --- --- 020527 00000 ------------ T 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 020530 00000 ------------ A 0.77 1.00 0.88 G 0.23 0.00 0.12 0000 --- --- --- --- 020539 00000 ------------ C 0.77 1.00 0.88 T 0.23 0.00 0.12 0000 --- --- --- --- 020705 00000 ------------ A 0.52 0.76 0.64 G 0.48 0.24 0.36 0000 --- --- --- --- 020752 00000 ------------ T 0.83 0.76 0.80 C 0.17 0.24 0.20 0000 --- --- --- --- 020852 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 020887 00000 ------------ A 0.77 1.00 0.88 G 0.23 0.00 0.12 0000 --- --- --- --- 020976 00000 ------------ G 0.86 0.74 0.80 A 0.14 0.26 0.20 0000 --- --- --- --- 021043 00000 ------------ G 0.83 0.58 0.70 A 0.17 0.42 0.30 0000 --- --- --- --- 021045 00000 ------------ A 0.50 0.74 0.62 G 0.50 0.26 0.38 0000 --- --- --- --- 021047 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 021150 00000 ------------ A 0.47 0.74 0.61 G 0.53 0.26 0.39 0000 --- --- --- --- 021160 00000 ------------ G 0.76 1.00 0.88 A 0.24 0.00 0.12 0000 --- --- --- --- 021209 00000 ------------ A 0.47 0.74 0.61 G 0.53 0.26 0.39 0000 --- --- --- --- 021270 00000 ------------ A 0.71 0.74 0.72 G 0.29 0.26 0.28 0000 --- --- --- --- 021272 00000 ------------ G 0.71 0.74 0.72 A 0.29 0.26 0.28 0000 --- --- --- --- 021404 00467 NON-SYN C 0.78 0.85 0.81 T 0.23 0.15 0.19 0156 CCG CTG PRO(P) LEU(L) 021419 00482 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0161 CGC CAC ARG(R) HIS(H) 021463 00526 NON-SYN C 0.77 1.00 0.88 G 0.23 0.00 0.12 0176 CGC GGC ARG(R) GLY(G) 021532 00595 NON-SYN C 0.98 0.93 0.96 T 0.02 0.07 0.04 0199 CGC TGC ARG(R) CYS(C) 021583 00646 NON-SYN T 0.83 0.76 0.79 A 0.17 0.24 0.21 0216 TTC ATC PHE(F) ILE(I) 021594 00657 SYNON C 0.78 1.00 0.89 T 0.22 0.00 0.11 0219 CAC CAT HIS(H) HIS(H) 021618 00681 SYNON G 0.87 0.76 0.82 A 0.13 0.24 0.18 0227 CCG CCA PRO(P) PRO(P) 021640 00703 NON-SYN G 0.78 1.00 0.89 A 0.22 0.00 0.11 0235 GGC AGC GLY(G) SER(S) 021705 00768 SYNON C 0.98 0.91 0.95 A 0.02 0.09 0.05 0256 ATC ATA ILE(I) ILE(I) 021708 00771 SYNON C 0.83 0.76 0.79 T 0.17 0.24 0.21 0257 CCC CCT PRO(P) PRO(P) 021733 00796 NON-SYN C 0.78 1.00 0.89 A 0.22 0.00 0.11 0266 CTG ATG LEU(L) MET(M) 021740 00803 NON-SYN G 0.78 1.00 0.89 C 0.22 0.00 0.11 0268 GGG GCG GLY(G) ALA(A) 021766 00829 NON-SYN G 0.83 0.76 0.79 A 0.17 0.24 0.21 0277 GTG ATG VAL(V) MET(M) 021867 00930 SYNON G 0.78 1.00 0.89 A 0.22 0.00 0.11 0310 CTG CTA LEU(L) LEU(L) 021996 01059 FRAME SHIFT - 0.04 0.15 0.10 + 0.96 0.85 0.90 0353 AA- AAC --- --- 022033 00000 ------------ G 0.75 1.00 0.87 A 0.25 0.00 0.13 0000 --- --- --- --- 022053 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 022162 00000 ------------ A 0.48 0.76 0.61 G 0.52 0.24 0.39 0000 --- --- --- --- 022204 00000 ------------ - 0.34 0.24 0.29 + 0.66 0.76 0.71 0000 --- --- --- --- 022490 00000 ------------ - 0.46 0.46 0.46 + 0.54 0.54 0.54 0000 --- --- --- --- 022518 00000 ------------ T 0.80 0.90 0.85 C 0.20 0.10 0.15 0000 --- --- --- --- 022962 00000 ------------ - 0.09 0.00 0.05 + 0.91 1.00 0.95 0000 --- --- --- --- 023043 00000 ------------ T 0.55 0.74 0.64 G 0.45 0.26 0.36 0000 --- --- --- --- 023339 00000 ------------ C 0.75 0.76 0.76 T 0.25 0.24 0.24 0000 --- --- --- --- 023340 00000 ------------ G 0.77 1.00 0.88 A 0.23 0.00 0.12 0000 --- --- --- --- 023408 00000 ------------ C 0.77 1.00 0.88 T 0.23 0.00 0.12 0000 --- --- --- --- 023413 00000 ------------ A 0.75 0.76 0.76 C 0.25 0.24 0.24 0000 --- --- --- --- 023444 00000 ------------ C 0.75 0.78 0.77 T 0.25 0.22 0.23 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000164: CCCTTCCT 001435: TGAGGAATTGCCACAATTTTTTCCTGCGCCTGCACC 003338: A 003340: TG 003955: T 005417: T 012879: TAAA 013136: GGCAGTTT 014274: TAGTGGTGGGCG 014700: GG 015628: T 017833: T 017904: GTGTGGACAGAAG 019467: C 019670: CCC 020146: G 020419: T 020424: TGGGCTCG 021996: C 022204: CACA 022490: CACA 022962: ACACACAGACACATAGA Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000176 00000 ------------ G 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 000451 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 000527 00000 ------------ G 0.86 1.00 0.93 A 0.14 0.00 0.07 0000 --- --- --- --- 000640 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 000951 -----** NON-SYN A 0.98 0.95 0.97 G 0.02 0.05 0.03 0026 AAG AGG LYS(K) ARG(R) 001480 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001501 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 001631 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 001846 00000 ------------ G 0.81 0.45 0.61 A 0.19 0.55 0.39 0000 --- --- --- --- 001848 00000 ------------ T 0.84 0.81 0.82 C 0.16 0.19 0.18 0000 --- --- --- --- 002173 00000 ------------ T 0.68 0.38 0.55 C 0.32 0.62 0.45 0000 --- --- --- --- 002179 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 002343 00000 ------------ T 0.77 1.00 0.88 C 0.23 0.00 0.12 0000 --- --- --- --- 002608 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 003113 00000 ------------ G 0.83 0.67 0.76 A 0.17 0.33 0.24 0000 --- --- --- --- 003179 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004021 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004456 00000 ------------ C 0.95 0.69 0.83 T 0.05 0.31 0.17 0000 --- --- --- --- 004967 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 005052 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 005245 00000 ------------ - 0.05 0.27 0.16 + 0.95 0.73 0.84 0000 --- --- --- --- 005765 00000 ------------ T 0.83 0.70 0.76 C 0.17 0.30 0.24 0000 --- --- --- --- 007459 00000 ------------ - 0.78 0.71 0.75 + 0.22 0.29 0.25 0000 --- --- --- --- 007954 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008803 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 009018 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009412 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 009570 00000 ------------ G 0.55 0.75 0.65 A 0.45 0.25 0.35 0000 --- --- --- --- 010966 00000 ------------ A 1.00 0.70 0.85 G 0.00 0.30 0.15 0000 --- --- --- --- 011419 00000 ------------ C 0.87 0.68 0.77 A 0.13 0.33 0.23 0000 --- --- --- --- 011532 00000 ------------ A 0.89 0.69 0.79 G 0.11 0.31 0.21 0000 --- --- --- --- 013203 00000 ------------ G 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 013345 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 013481 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014066 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 014317 00000 ------------ C 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 015053 00000 ------------ T 0.85 0.70 0.77 C 0.15 0.30 0.23 0000 --- --- --- --- 015730 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 016854 00000 ------------ C 0.59 0.74 0.66 G 0.41 0.26 0.34 0000 --- --- --- --- 018199 00000 ------------ G 0.85 0.70 0.78 A 0.15 0.30 0.23 0000 --- --- --- --- 018223 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 018575 00000 ------------ T 1.00 0.82 0.91 C 0.00 0.18 0.09 0000 --- --- --- --- 018644 00000 ------------ A 0.88 0.68 0.78 C 0.12 0.32 0.22 0000 --- --- --- --- 018862 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 018931 00000 ------------ A 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 019174 00000 ------------ T 0.87 0.70 0.78 A 0.13 0.30 0.22 0000 --- --- --- --- 019227 00000 ------------ A 0.87 0.70 0.78 G 0.13 0.30 0.22 0000 --- --- --- --- 019703 00000 ------------ G 0.92 0.70 0.81 T 0.08 0.30 0.19 0000 --- --- --- --- 020023 00000 ------------ - 0.14 0.30 0.24 + 0.86 0.70 0.76 0000 --- --- --- --- 020209 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 020341 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 020699 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 020988 00000 ------------ G 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 021898 00000 ------------ C 0.91 0.66 0.79 T 0.09 0.34 0.21 0000 --- --- --- --- 022087 00000 ------------ A 0.92 0.67 0.80 G 0.08 0.33 0.20 0000 --- --- --- --- 022163 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022354 00000 ------------ T 1.00 0.91 0.96 C 0.00 0.09 0.04 0000 --- --- --- --- 022413 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 022879 00000 ------------ A 0.76 0.70 0.72 T 0.24 0.30 0.28 0000 --- --- --- --- 023320 00000 ------------ A 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- 023775 00000 ------------ - 0.10 0.32 0.21 + 0.90 0.68 0.79 0000 --- --- --- --- 024013 00000 ------------ G 0.83 1.00 0.92 A 0.17 0.00 0.08 0000 --- --- --- --- 024231 00000 ------------ A 0.85 1.00 0.93 C 0.15 0.00 0.07 0000 --- --- --- --- 024460 00000 ------------ G 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 024888 00000 ------------ A 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 025506 00000 ------------ T 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 027742 00000 ------------ T 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 028203 00000 ------------ T 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 028207 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 028265 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 029017 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 029120 00000 ------------ C 0.52 0.80 0.66 G 0.48 0.20 0.34 0000 --- --- --- --- 029735 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 029807 00000 ------------ A 0.92 1.00 0.95 G 0.08 0.00 0.05 0000 --- --- --- --- 029949 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 030202 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 030225 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030306 00000 ------------ T 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 030899 00000 ------------ A 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 030921 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 031618 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 031657 00000 ------------ C 0.54 0.80 0.67 G 0.46 0.20 0.33 0000 --- --- --- --- 031949 00000 ------------ A 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 032424 00000 ------------ G 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 032604 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 032964 00000 ------------ A 0.50 0.80 0.66 G 0.50 0.20 0.34 0000 --- --- --- --- 033480 00000 ------------ C 0.78 0.80 0.79 T 0.22 0.20 0.21 0000 --- --- --- --- 035227 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 035508 -----** SYNON T 0.90 1.00 0.95 C 0.10 0.00 0.05 0690 AAT AAC ASN(N) ASN(N) 035640 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 035739 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 035824 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 035881 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 036024 00000 ------------ G 0.71 0.74 0.72 C 0.29 0.26 0.28 0000 --- --- --- --- 036139 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 036444 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 036962 00000 ------------ T 1.00 0.80 0.90 C 0.00 0.20 0.10 0000 --- --- --- --- 037071 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 037138 00000 ------------ G 0.77 0.46 0.62 A 0.23 0.54 0.38 0000 --- --- --- --- 037142 00000 ------------ A 0.79 1.00 0.89 G 0.21 0.00 0.11 0000 --- --- --- --- 037165 00000 ------------ A 0.79 1.00 0.89 G 0.21 0.00 0.11 0000 --- --- --- --- 037181 00000 ------------ A 0.79 1.00 0.89 G 0.21 0.00 0.11 0000 --- --- --- --- 037319 00000 ------------ G 0.90 0.83 0.87 A 0.10 0.17 0.13 0000 --- --- --- --- ** Sites are not mapped to the complete CDNA. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 005245: A 007459: T 020023: TAAT 023775: TTATC 030921: T Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000218 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000375 00000 ------------ C 0.78 1.00 0.89 T 0.22 0.00 0.11 0000 --- --- --- --- 000945 00000 ------------ C 0.93 0.71 0.84 A 0.07 0.29 0.16 0000 --- --- --- --- 000946 00000 ------------ C 0.93 0.74 0.85 A 0.07 0.26 0.15 0000 --- --- --- --- 000956 00000 ------------ C 0.93 0.71 0.84 A 0.07 0.29 0.16 0000 --- --- --- --- 000980 00000 ------------ - 0.11 0.22 0.16 + 0.89 0.78 0.84 0000 --- --- --- --- 001123 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001193 00000 ------------ C 0.79 1.00 0.89 G 0.21 0.00 0.11 0000 --- --- --- --- 001228 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001704 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001745 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 001908 00000 ------------ C 0.56 0.57 0.56 A 0.44 0.43 0.44 0000 --- --- --- --- 002195 00000 ------------ C 0.94 0.76 0.85 T 0.06 0.24 0.15 0000 --- --- --- --- 002365 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002499 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 002531 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 002547 00000 ------------ C 0.94 0.76 0.85 T 0.06 0.24 0.15 0000 --- --- --- --- 003011 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003028 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003074 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 003339 00000 ------------ C 0.79 0.48 0.64 T 0.21 0.52 0.36 0000 --- --- --- --- 003407 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 003415 00000 ------------ G 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 003496 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 003551 00000 ------------ C 0.81 1.00 0.90 A 0.19 0.00 0.10 0000 --- --- --- --- 003586 00000 ------------ G 0.88 0.60 0.74 A 0.12 0.40 0.26 0000 --- --- --- --- 003610 00000 ------------ G 0.85 0.60 0.73 A 0.15 0.40 0.27 0000 --- --- --- --- 003742 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004157 00195 NON-SYN G 0.96 1.00 0.98 A 0.04 0.00 0.02 0034 CGG CAG ARG(R) GLN(Q) 004459 00497 NON-SYN C 1.00 0.98 0.99 G 0.00 0.02 0.01 0135 CCA GCA PRO(P) ALA(A) 004863 00901 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0269 ACG ACA THR(T) THR(T) 004929 00967 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0291 GGC GGT GLY(G) GLY(G) 005088 01126 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0344 GAG GAA GLU(E) GLU(E) 005113 01151 NON-SYN C 0.98 0.95 0.97 A 0.02 0.05 0.03 0353 CAC AAC HIS(H) ASN(N) 005145 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005395 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005833 01525 SYNON C 0.74 0.96 0.85 T 0.26 0.04 0.15 0477 CCC CCT PRO(P) PRO(P) 006055 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 006214 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006271 00000 ------------ G 0.65 0.57 0.61 A 0.35 0.43 0.39 0000 --- --- --- --- 006591 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 006672 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 006793 00000 ------------ G 0.86 1.00 0.93 A 0.14 0.00 0.07 0000 --- --- --- --- 007252 01869 NON-SYN C 0.87 0.61 0.73 G 0.13 0.39 0.27 0592 CCG CGG PRO(P) ARG(R) 007272 01889 NON-SYN C 1.00 0.98 0.99 A 0.00 0.02 0.01 0599 CCC ACC PRO(P) THR(T) 007503 02120 3' UTR G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 007740 02357 3' UTR T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 008162 02779 3' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 008189 02806 3' UTR C 0.75 0.96 0.85 A 0.25 0.04 0.15 0000 --- --- --- --- 008390 00000 ------------ A 0.81 0.96 0.88 G 0.19 0.04 0.12 0000 --- --- --- --- 008593 00000 ------------ C 0.82 1.00 0.91 A 0.18 0.00 0.09 0000 --- --- --- --- 008609 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 009156 00000 ------------ C 0.93 0.80 0.87 G 0.07 0.20 0.13 0000 --- --- --- --- 009254 00000 ------------ C 0.69 0.57 0.63 A 0.31 0.42 0.37 0000 --- --- --- --- 009800 00000 ------------ G 0.74 0.96 0.85 A 0.26 0.04 0.15 0000 --- --- --- --- 009822* 009875 00000 ------------ G 0.89 0.59 0.74 T 0.11 0.41 0.26 0000 --- --- --- --- 009894 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000980: GC 001745: A 003407: T 006055: AG The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 009822 A 0.20 0.52 0.36 C 0.00 0.02 0.01 G 0.80 0.46 0.63 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000200 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 000931 00000 ------------ C 0.84 0.68 0.77 A 0.16 0.32 0.23 0000 --- --- --- --- 001151 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001835 00000 ------------ C 0.97 1.00 0.98 A 0.03 0.00 0.02 0000 --- --- --- --- 002190 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002567 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003879 00000 ------------ G 0.85 0.74 0.79 C 0.15 0.26 0.21 0000 --- --- --- --- 004012 00036 SYNON A 0.98 0.96 0.97 G 0.02 0.04 0.03 0012 ACA ACG THR(T) THR(T) 004570 00594 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0198 ATC ATT ILE(I) ILE(I) 004608 00632 NON-SYN G 1.00 0.93 0.97 C 0.00 0.07 0.03 0211 GGG GCG GLY(G) ALA(A) 004870 00894 FRAME SHIFT - 0.15 0.26 0.20 + 0.85 0.74 0.80 0298 GA- GAA --- --- 005111 01135 NON-SYN G 1.00 0.95 0.98 A 0.00 0.05 0.02 0379 GTT ATT VAL(V) ILE(I) 005158 01182 SYNON C 0.79 0.75 0.77 A 0.21 0.25 0.23 0394 GGC GGA GLY(G) GLY(G) 005327 01351 FRAME SHIFT - 1.00 0.98 0.99 + 0.00 0.02 0.01 0451 -TG TTG --- --- 005753 01777 3' UTR C 0.81 0.77 0.79 A 0.19 0.23 0.21 0000 --- --- --- --- 005793 01817 3' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 006393 02417 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006533 02557 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006640 02664 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006716 02740 3' UTR C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006832 02856 3' UTR A 0.96 0.96 0.96 G 0.04 0.04 0.04 0000 --- --- --- --- 008331 00000 ------------ - 0.22 0.26 0.24 + 0.78 0.74 0.76 0000 --- --- --- --- 008536 00000 ------------ A 0.79 0.74 0.77 G 0.21 0.26 0.23 0000 --- --- --- --- 008677 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 008708 00000 ------------ C 0.87 0.74 0.81 A 0.13 0.26 0.19 0000 --- --- --- --- 008988 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 010411 00000 ------------ T 0.80 1.00 0.90 C 0.20 0.00 0.10 0000 --- --- --- --- 010493 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 010537 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010774 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010895 00000 ------------ C 0.85 0.74 0.80 G 0.15 0.26 0.20 0000 --- --- --- --- 011090 00000 ------------ C 0.85 0.74 0.80 A 0.15 0.26 0.20 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004870: AGAGGAGGA 005327: T 008331: C 008677: CCATGCTGTGA Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000126 00000 ------------ - 0.94 1.00 0.97 + 0.06 0.00 0.03 0000 --- --- --- --- 000137 00000 ------------ C 0.96 0.80 0.88 T 0.04 0.20 0.12 0000 --- --- --- --- 000160 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000162 00000 ------------ A 0.96 0.87 0.91 G 0.04 0.13 0.09 0000 --- --- --- --- 000320 00000 ------------ A 0.96 0.78 0.87 G 0.04 0.22 0.13 0000 --- --- --- --- 000774 00000 ------------ G 0.96 0.80 0.88 A 0.04 0.20 0.12 0000 --- --- --- --- 000861 00000 ------------ C 0.96 0.80 0.88 T 0.04 0.20 0.12 0000 --- --- --- --- 001299 00000 ------------ - 0.09 0.12 0.10 + 0.91 0.88 0.90 0000 --- --- --- --- 001691 00000 ------------ A 0.96 0.77 0.87 G 0.04 0.23 0.13 0000 --- --- --- --- 001916 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 001917 00000 ------------ A 0.94 0.89 0.91 G 0.06 0.11 0.09 0000 --- --- --- --- 002045 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 002094 00000 ------------ - 0.04 0.12 0.08 + 0.96 0.88 0.92 0000 --- --- --- --- 002697 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 002720 00000 ------------ G 0.56 0.70 0.63 A 0.44 0.30 0.37 0000 --- --- --- --- 003160 00000 ------------ C 0.95 0.76 0.86 T 0.05 0.24 0.14 0000 --- --- --- --- 003296 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 003302 00000 ------------ T 0.80 0.65 0.72 C 0.20 0.35 0.28 0000 --- --- --- --- 003452 00000 ------------ - 0.94 1.00 0.97 + 0.06 0.00 0.03 0000 --- --- --- --- 003631 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003711 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 004077 00000 ------------ C 0.96 0.78 0.87 T 0.04 0.22 0.13 0000 --- --- --- --- 004120 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 004463 00000 ------------ A 0.96 0.79 0.88 C 0.04 0.21 0.12 0000 --- --- --- --- 004803 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004865 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004891 00000 ------------ C 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 005079 00000 ------------ T 0.68 0.61 0.65 C 0.32 0.39 0.35 0000 --- --- --- --- 005111 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005238 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005421 00000 ------------ T 0.79 0.77 0.78 G 0.21 0.23 0.22 0000 --- --- --- --- 005576 00000 ------------ T 0.95 0.77 0.86 C 0.05 0.23 0.14 0000 --- --- --- --- 005913 00000 ------------ T 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 006424 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 006597 00000 ------------ T 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 007070 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 007201 00000 ------------ T 0.86 0.82 0.84 C 0.14 0.18 0.16 0000 --- --- --- --- 007439 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 007442 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007862 00222 NON-SYN A 0.85 0.78 0.82 G 0.15 0.22 0.18 0049 AGC GGC SER(S) GLY(G) 008032 00392 SYNON G 0.85 1.00 0.92 T 0.15 0.00 0.08 0105 CTG CTT LEU(L) LEU(L) 008882 01242 NON-SYN C 0.47 0.72 0.62 G 0.53 0.28 0.38 0389 CGA GGA ARG(R) GLY(G) 008883 01243 NON-SYN G 0.93 1.00 0.97 T 0.07 0.00 0.03 0389 CGA CTA ARG(R) LEU(L) 009559 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 010067 00000 ------------ - 0.91 0.79 0.86 + 0.09 0.21 0.14 0000 --- --- --- --- 010325 00000 ------------ T 0.97 1.00 0.98 A 0.03 0.00 0.02 0000 --- --- --- --- 010659 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 010709 00000 ------------ C 0.96 0.77 0.87 T 0.04 0.23 0.13 0000 --- --- --- --- 010825 00000 ------------ C 0.98 0.97 0.98 T 0.02 0.03 0.02 0000 --- --- --- --- 010843 00000 ------------ T 0.52 0.68 0.60 C 0.48 0.33 0.40 0000 --- --- --- --- 010987 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011884 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 012091 00000 ------------ A 0.78 0.76 0.77 C 0.22 0.24 0.23 0000 --- --- --- --- 012114 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 012129 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012361 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012562 00000 ------------ C 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 012815 00000 ------------ G 0.95 0.75 0.86 A 0.05 0.25 0.14 0000 --- --- --- --- 012841 00000 ------------ G 0.93 0.75 0.85 A 0.07 0.25 0.15 0000 --- --- --- --- 012998 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 013291 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013408 00000 ------------ C 0.83 0.76 0.80 T 0.17 0.24 0.20 0000 --- --- --- --- 013805 00000 ------------ C 0.81 0.75 0.78 T 0.19 0.25 0.22 0000 --- --- --- --- 013836 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014238 00000 ------------ C 0.85 0.77 0.81 G 0.15 0.23 0.19 0000 --- --- --- --- 014495 00000 ------------ A 0.78 0.82 0.80 C 0.22 0.18 0.20 0000 --- --- --- --- 014572 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 014968 00000 ------------ A 0.79 0.76 0.78 G 0.21 0.24 0.22 0000 --- --- --- --- 015149 00000 ------------ C 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 015151 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015243 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 015304 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 015321 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 015809 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 015959 00000 ------------ - 0.06 0.25 0.15 + 0.94 0.75 0.85 0000 --- --- --- --- 016158 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 016259 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016417 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000126: A 001299: G 002094: AA 003452: T 010067: A 015959: T Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000315 00000 ------------ - 0.17 0.33 0.25 + 0.83 0.67 0.75 0000 --- --- --- --- 000493 00000 ------------ G 0.59 0.59 0.59 C 0.41 0.41 0.41 0000 --- --- --- --- 000626 00000 ------------ G 0.53 0.60 0.56 A 0.47 0.40 0.44 0000 --- --- --- --- 000912 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000929 00000 ------------ T 0.57 0.57 0.57 C 0.43 0.43 0.43 0000 --- --- --- --- 000933 00000 ------------ A 0.57 0.57 0.57 T 0.43 0.43 0.43 0000 --- --- --- --- 000956 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000969 00000 ------------ C 0.57 0.57 0.57 A 0.43 0.43 0.43 0000 --- --- --- --- 001061 00000 ------------ T 0.87 0.82 0.84 C 0.13 0.18 0.16 0000 --- --- --- --- 001526 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001587 00000 ------------ C 0.56 0.59 0.57 T 0.44 0.41 0.43 0000 --- --- --- --- 001833 00000 ------------ T 0.59 0.59 0.59 C 0.41 0.41 0.41 0000 --- --- --- --- 002402 00000 ------------ A 0.79 0.65 0.72 T 0.21 0.35 0.28 0000 --- --- --- --- 002482 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002567 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002689 00000 ------------ C 0.65 0.76 0.70 T 0.35 0.24 0.30 0000 --- --- --- --- 002791 00000 ------------ T 0.65 0.76 0.70 A 0.35 0.24 0.30 0000 --- --- --- --- 002877 00000 ------------ G 0.54 0.59 0.57 A 0.46 0.41 0.43 0000 --- --- --- --- 002937 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003197 00000 ------------ G 0.55 0.59 0.57 A 0.45 0.41 0.43 0000 --- --- --- --- 003566 00000 ------------ G 0.78 0.67 0.73 A 0.22 0.33 0.27 0000 --- --- --- --- 003752 00000 ------------ C 0.91 0.59 0.75 G 0.09 0.41 0.25 0000 --- --- --- --- 003814 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 003853 00000 ------------ T 0.92 0.59 0.76 C 0.08 0.41 0.24 0000 --- --- --- --- 003918 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003943 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003958 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 003985 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004173 00173 5' UTR T 0.90 0.57 0.73 C 0.10 0.43 0.27 0000 --- --- --- --- 004200 00200 5' UTR T 0.92 0.57 0.74 C 0.08 0.43 0.26 0000 --- --- --- --- 004265 00265 NON-SYN G 0.46 0.67 0.56 A 0.54 0.33 0.44 0016 GGA AGA GLY(G) ARG(R) 004298 00298 NON-SYN C 0.91 0.59 0.76 G 0.09 0.41 0.24 0027 CAA GAA GLN(Q) GLU(E) 004471 00471 SYNON G 0.65 0.76 0.71 A 0.35 0.24 0.29 0084 CTG CTA LEU(L) LEU(L) 004742 00742 SYNON C 0.65 0.83 0.73 A 0.35 0.17 0.27 0175 CGG AGG ARG(R) ARG(R) 004878 00878 NON-SYN C 0.96 1.00 0.98 G 0.04 0.00 0.02 0220 TCC TGC SER(S) CYS(C) 005059 01059 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0280 GGC GGT GLY(G) GLY(G) 005272 01272 SYNON G 0.63 0.67 0.65 C 0.37 0.33 0.35 0351 GGG GGC GLY(G) GLY(G) 005458 01458 SYNON G 0.42 0.61 0.51 A 0.58 0.39 0.49 0413 CTG CTA LEU(L) LEU(L) 005628 01628 3' UTR G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 006645 00000 ------------ C 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 006668 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006838 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 007207 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 007332 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 007405 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 007458 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007493 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 007607 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 008059 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 008094 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 008210 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008274 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 008426 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008817 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 008820 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 009082* 009265 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009303 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 009593 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 009685 00000 ------------ C 0.54 0.80 0.67 G 0.46 0.20 0.33 0000 --- --- --- --- 009818 00000 ------------ C 0.52 0.80 0.66 A 0.48 0.20 0.34 0000 --- --- --- --- 009830 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000315: G 008059: CTG The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 009082 C 0.81 1.00 0.90 G 0.17 0.00 0.09 T 0.02 0.00 0.01 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000273 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 000364 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 000680 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001109 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001191 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 002555 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002773 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002776 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 003112 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003207 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 003647 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 003792 00045 5' UTR G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 003826 00079 5' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004134 00387 NON-SYN T 0.89 0.87 0.88 C 0.11 0.13 0.12 0064 TGG CGG TRP(W) ARG(R) 005001 01254 NON-SYN C 0.93 1.00 0.97 T 0.07 0.00 0.03 0353 CGC TGC ARG(R) CYS(C) 005072 01325 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0376 CGC CGT ARG(R) ARG(R) 005163 00000 ------------ G 0.90 0.87 0.88 T 0.10 0.13 0.12 0000 --- --- --- --- 005231 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005308 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 005518 00000 ------------ C 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 005584 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005819 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006238 01466 3' UTR G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 006446 01674 3' UTR G 0.90 0.87 0.88 C 0.10 0.13 0.12 0000 --- --- --- --- 006483 01711 3' UTR C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006553 01781 3' UTR C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 006787 02015 3' UTR C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006862 02090 3' UTR C 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 006873 02101 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007076 02304 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007210 02438 3' UTR T 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 007491 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 007502 00000 ------------ A 0.96 0.87 0.91 T 0.04 0.13 0.09 0000 --- --- --- --- 007839 00000 ------------ T 0.63 0.86 0.76 C 0.37 0.14 0.24 0000 --- --- --- --- 008552 00000 ------------ - 0.22 0.00 0.12 + 0.78 1.00 0.88 0000 --- --- --- --- 008756 00000 ------------ T 0.85 0.87 0.86 C 0.15 0.13 0.14 0000 --- --- --- --- 009284 00000 ------------ C 0.69 0.87 0.78 T 0.31 0.13 0.22 0000 --- --- --- --- 009476 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009648 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010395 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 010426 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 010481 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010629 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 010984 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000364: A 003207: GA 003647: A 008552: GACT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000209 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 000258 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000657 00000 ------------ C 0.89 0.64 0.80 G 0.11 0.36 0.20 0000 --- --- --- --- 000780 00000 ------------ G 1.00 0.86 0.95 A 0.00 0.14 0.05 0000 --- --- --- --- 000800 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001009 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 001431 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 001472 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001581 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001842 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 002142 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002287 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 003040 00000 ------------ - 0.07 0.15 0.11 + 0.93 0.85 0.89 0000 --- --- --- --- 003041 00000 ------------ T 0.89 0.80 0.85 C 0.11 0.20 0.15 0000 --- --- --- --- 003128 00000 ------------ G 0.50 0.67 0.59 T 0.50 0.33 0.41 0000 --- --- --- --- 003134 00000 ------------ T 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 003290 00000 ------------ C 0.74 0.58 0.67 T 0.26 0.42 0.33 0000 --- --- --- --- 003338 00000 ------------ T 0.98 0.76 0.88 C 0.02 0.24 0.12 0000 --- --- --- --- 003863 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003930 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 004100 00000 ------------ - 0.90 1.00 0.95 + 0.10 0.00 0.05 0000 --- --- --- --- 004844 00000 ------------ A 0.90 0.65 0.78 T 0.10 0.35 0.22 0000 --- --- --- --- 004871 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 004921 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 005000 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005337 00000 ------------ T 0.72 0.28 0.51 A 0.28 0.72 0.49 0000 --- --- --- --- 006157 00000 ------------ C 0.52 0.81 0.67 T 0.48 0.19 0.33 0000 --- --- --- --- 006587 00000 ------------ T 0.54 0.63 0.59 G 0.46 0.37 0.41 0000 --- --- --- --- 006630 00000 ------------ C 0.74 0.67 0.71 T 0.26 0.33 0.29 0000 --- --- --- --- 006812 00000 ------------ C 0.91 0.67 0.79 T 0.09 0.33 0.21 0000 --- --- --- --- 007132 00000 ------------ T 0.98 0.87 0.92 C 0.02 0.13 0.08 0000 --- --- --- --- 007196 00000 ------------ G 0.89 0.67 0.78 A 0.11 0.33 0.22 0000 --- --- --- --- 007751 00000 ------------ G 0.76 0.62 0.70 A 0.24 0.38 0.30 0000 --- --- --- --- 008543 00000 ------------ T 0.38 0.72 0.53 G 0.62 0.28 0.47 0000 --- --- --- --- 008566 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008607 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008623 00000 ------------ - 0.10 0.35 0.22 + 0.90 0.65 0.78 0000 --- --- --- --- 008772 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008840 00000 ------------ G 0.67 0.83 0.74 A 0.33 0.17 0.26 0000 --- --- --- --- 008854 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 008976 00000 ------------ G 0.79 0.55 0.68 A 0.21 0.45 0.32 0000 --- --- --- --- 009060 00000 ------------ C 0.90 0.64 0.78 G 0.10 0.36 0.22 0000 --- --- --- --- 009189 00000 ------------ G 0.98 0.88 0.93 A 0.02 0.12 0.07 0000 --- --- --- --- 009395 00000 ------------ A 0.50 0.58 0.54 G 0.50 0.42 0.46 0000 --- --- --- --- 009598 00000 ------------ - 0.02 0.13 0.08 + 0.98 0.87 0.92 0000 --- --- --- --- 009734 00000 ------------ - 0.16 0.44 0.28 + 0.84 0.56 0.72 0000 --- --- --- --- 009801 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009923 00000 ------------ G 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 010050 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 010397 00000 ------------ C 0.88 0.97 0.92 T 0.12 0.03 0.08 0000 --- --- --- --- 010398 00000 ------------ G 0.88 0.59 0.73 A 0.12 0.41 0.27 0000 --- --- --- --- 010699 00000 ------------ T 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 011146 00000 ------------ G 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 011492 00000 ------------ C 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 011765 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011880 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 012025 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 012647 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012712 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 012814 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012884 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 012960 00000 ------------ T 0.50 0.82 0.66 G 0.50 0.18 0.34 0000 --- --- --- --- 013109 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013405 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 013535 00000 ------------ C 0.77 0.32 0.55 T 0.23 0.68 0.45 0000 --- --- --- --- 013536 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013724 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 013805 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 013868 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 014079 00000 ------------ A 0.98 0.86 0.92 G 0.02 0.14 0.08 0000 --- --- --- --- 014345 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 014348 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 014539 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014792 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014815 00000 ------------ T 0.60 0.64 0.62 G 0.40 0.36 0.38 0000 --- --- --- --- 015270 00000 ------------ C 0.88 0.86 0.87 T 0.12 0.14 0.13 0000 --- --- --- --- 015511 00000 ------------ T 0.52 0.64 0.58 G 0.48 0.36 0.42 0000 --- --- --- --- 015524 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 015635 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 015676 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 015802 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 015833 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015844 00000 ------------ A 0.73 0.52 0.63 T 0.27 0.48 0.37 0000 --- --- --- --- 015909 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 015954 00000 ------------ C 0.78 0.70 0.74 G 0.22 0.30 0.26 0000 --- --- --- --- 016306 00482 NON-SYN C 0.98 1.00 0.99 T 0.02 0.00 0.01 0143 GCA GTA ALA(A) VAL(V) 016463 00639 3' UTR G 0.82 1.00 0.91 A 0.18 0.00 0.09 0000 --- --- --- --- 016614 00790 3' UTR C 0.95 0.81 0.88 T 0.05 0.19 0.12 0000 --- --- --- --- 016783 00959 3' UTR G 0.89 0.69 0.79 A 0.11 0.31 0.21 0000 --- --- --- --- 016800 00976 3' UTR C 0.89 0.69 0.79 T 0.11 0.31 0.21 0000 --- --- --- --- 016874 01050 3' UTR A 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 016953 00000 ------------ A 0.80 0.68 0.74 G 0.20 0.32 0.26 0000 --- --- --- --- 017082 00000 ------------ G 0.80 0.64 0.72 A 0.20 0.36 0.28 0000 --- --- --- --- 017139 00000 ------------ - 0.11 0.32 0.21 + 0.89 0.68 0.79 0000 --- --- --- --- 017343 00000 ------------ A 0.93 0.68 0.80 G 0.07 0.33 0.20 0000 --- --- --- --- 017382 00000 ------------ T 0.97 0.86 0.91 G 0.03 0.14 0.09 0000 --- --- --- --- 017392 00000 ------------ A 0.93 0.69 0.80 G 0.07 0.31 0.20 0000 --- --- --- --- 017893 00000 ------------ G 0.94 0.79 0.86 A 0.06 0.21 0.14 0000 --- --- --- --- 017983 00000 ------------ - 0.06 0.13 0.10 + 0.94 0.87 0.90 0000 --- --- --- --- 017995 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 018143 00000 ------------ - 0.00 0.03 0.01 + 1.00 0.97 0.99 0000 --- --- --- --- 018144 00000 ------------ C 0.89 0.68 0.78 T 0.11 0.33 0.22 0000 --- --- --- --- 018236 00000 ------------ G 0.74 0.71 0.72 A 0.26 0.29 0.28 0000 --- --- --- --- 018420 00000 ------------ A 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- 018440 00000 ------------ G 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 018763 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 018804 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 018948 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 018950 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 019103 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 019199 00000 ------------ G 0.87 0.89 0.88 A 0.13 0.11 0.12 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002287: GGGGC 003040: CTGGGT 004100: AGGTC 008623: CTTCCTTC 009598: GA 009734: CC 012025: T 012884: TCCT 017139: GA 017983: GAAGCCACAGTCCATTCATTGTAGGGAGTATGGACCAG 018143: C Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000386 00000 ------------ - 0.48 0.63 0.56 + 0.52 0.37 0.44 0000 --- --- --- --- 000864 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001138 00000 ------------ - 0.79 1.00 0.89 + 0.21 0.00 0.11 0000 --- --- --- --- 001158 00000 ------------ G 0.44 0.67 0.58 C 0.56 0.33 0.42 0000 --- --- --- --- 001440 00000 ------------ G 0.96 0.78 0.87 A 0.04 0.22 0.13 0000 --- --- --- --- 001586 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001649 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001661 00000 ------------ C 0.57 0.59 0.58 T 0.43 0.41 0.42 0000 --- --- --- --- 001764 00000 ------------ G 0.82 0.61 0.71 A 0.18 0.39 0.29 0000 --- --- --- --- 002102 00156 SYNON G 0.85 1.00 0.93 C 0.15 0.00 0.07 0041 CCG CCC PRO(P) PRO(P) 002172 00000 ------------ T 0.50 0.63 0.56 C 0.50 0.37 0.44 0000 --- --- --- --- 002180 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002274 00000 ------------ C 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 002619 00000 ------------ G 0.96 0.76 0.86 A 0.04 0.24 0.14 0000 --- --- --- --- 002902 00000 ------------ C 0.97 0.94 0.96 T 0.03 0.06 0.04 0000 --- --- --- --- 002905 00000 ------------ T 0.69 0.69 0.69 C 0.31 0.31 0.31 0000 --- --- --- --- 002926 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 002987 00000 ------------ G 0.69 0.69 0.69 T 0.31 0.31 0.31 0000 --- --- --- --- 003388 00000 ------------ T 0.61 0.61 0.61 C 0.39 0.39 0.39 0000 --- --- --- --- 003480 00000 ------------ C 0.85 1.00 0.91 T 0.15 0.00 0.09 0000 --- --- --- --- 003604 00000 ------------ - 0.98 0.82 0.90 + 0.02 0.18 0.10 0000 --- --- --- --- 003665 00000 ------------ T 0.62 0.61 0.62 C 0.38 0.39 0.38 0000 --- --- --- --- 003896 00000 ------------ A 0.96 1.00 0.97 G 0.04 0.00 0.03 0000 --- --- --- --- 004216 00000 ------------ G 0.94 0.68 0.82 A 0.06 0.32 0.18 0000 --- --- --- --- 005003 00000 ------------ T 0.98 0.82 0.90 C 0.02 0.18 0.10 0000 --- --- --- --- 005158 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005287 00798 SYNON A 0.68 0.61 0.65 G 0.32 0.39 0.35 0255 TCA TCG SER(S) SER(S) 005304 00815 NON-SYN G 0.68 0.61 0.65 A 0.32 0.39 0.35 0261 CGG CAG ARG(R) GLN(Q) 005354 00000 ------------ A 0.98 0.84 0.91 T 0.02 0.16 0.09 0000 --- --- --- --- 005431 00000 ------------ G 0.67 0.61 0.64 A 0.33 0.39 0.36 0000 --- --- --- --- 006036 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006081 00000 ------------ A 0.64 0.64 0.64 G 0.36 0.36 0.36 0000 --- --- --- --- 006336 00978 SYNON C 1.00 0.95 0.98 G 0.00 0.05 0.02 0315 GTC GTG VAL(V) VAL(V) 006488 00000 ------------ G 0.57 0.57 0.57 A 0.43 0.43 0.43 0000 --- --- --- --- 006542 00000 ------------ T 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 006807 00000 ------------ T 0.65 0.63 0.64 C 0.35 0.37 0.36 0000 --- --- --- --- 007090 00000 ------------ A 0.78 0.57 0.68 G 0.22 0.43 0.32 0000 --- --- --- --- 007092 00000 ------------ G 0.80 0.64 0.72 C 0.20 0.36 0.28 0000 --- --- --- --- 007244 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 007478 00998 NON-SYN A 0.80 0.63 0.72 G 0.20 0.37 0.28 0322 AAC AGC ASN(N) SER(S) 007605 01125 SYNON G 0.61 0.63 0.62 T 0.39 0.37 0.38 0364 ACG ACT THR(T) THR(T) 007746 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 007902 00000 ------------ C 0.93 0.90 0.91 T 0.07 0.10 0.09 0000 --- --- --- --- 008168 00000 ------------ C 0.65 0.66 0.65 T 0.35 0.34 0.35 0000 --- --- --- --- 008187 00000 ------------ C 0.65 0.66 0.65 T 0.35 0.34 0.35 0000 --- --- --- --- 008328 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 008429 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 008630 00000 ------------ - 0.35 0.34 0.35 + 0.65 0.66 0.65 0000 --- --- --- --- 009013 00000 ------------ T 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 009115 00000 ------------ A 0.98 0.89 0.93 G 0.02 0.11 0.07 0000 --- --- --- --- 009116 00000 ------------ G 0.70 0.74 0.72 C 0.30 0.26 0.28 0000 --- --- --- --- 009489 00000 ------------ G 0.68 0.76 0.72 A 0.33 0.24 0.28 0000 --- --- --- --- 009546 00000 ------------ C 0.80 1.00 0.91 T 0.20 0.00 0.09 0000 --- --- --- --- 009615 00000 ------------ G 0.71 0.74 0.72 A 0.29 0.26 0.28 0000 --- --- --- --- 010764 00000 ------------ A 0.78 0.80 0.79 G 0.23 0.20 0.21 0000 --- --- --- --- 010901 00000 ------------ - 0.80 0.80 0.80 + 0.20 0.20 0.20 0000 --- --- --- --- 011027 00000 ------------ A 0.95 0.97 0.96 C 0.05 0.03 0.04 0000 --- --- --- --- 011449 00000 ------------ G 0.96 0.80 0.88 A 0.04 0.20 0.12 0000 --- --- --- --- 011763 01322 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0430 CGT CAT ARG(R) HIS(H) 011924* 011925 00000 ------------ G 0.79 1.00 0.89 C 0.21 0.00 0.11 0000 --- --- --- --- 012384 01485 SYNON A 0.96 0.81 0.89 G 0.04 0.19 0.11 0484 CAA CAG GLN(Q) GLN(Q) 012516 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012619 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 012754 00000 ------------ A 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 012757 00000 ------------ T 0.79 0.80 0.80 G 0.21 0.20 0.20 0000 --- --- --- --- 012764 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013137 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 013534 00000 ------------ C 0.50 0.54 0.52 G 0.50 0.46 0.48 0000 --- --- --- --- 013759 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014237 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 015098 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015114 00000 ------------ G 0.50 0.54 0.52 C 0.50 0.46 0.48 0000 --- --- --- --- 015166 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015513 00000 ------------ C 0.95 0.97 0.96 T 0.05 0.03 0.04 0000 --- --- --- --- 015592 00000 ------------ G 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 016198 01935 SYNON G 0.92 0.89 0.90 A 0.08 0.11 0.10 0634 CTG CTA LEU(L) LEU(L) 016401 02138 3' UTR C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 016886 00000 ------------ C 0.81 0.80 0.81 T 0.19 0.20 0.19 0000 --- --- --- --- 017079 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 017316 00000 ------------ C 0.81 0.79 0.80 T 0.19 0.21 0.20 0000 --- --- --- --- 017594 00000 ------------ A 0.94 0.66 0.80 G 0.06 0.34 0.20 0000 --- --- --- --- 017628 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017947 00000 ------------ G 0.50 0.55 0.52 C 0.50 0.45 0.48 0000 --- --- --- --- 017965 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 017979 00000 ------------ A 0.96 0.82 0.89 G 0.04 0.18 0.11 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000386: C 001138: T 003604: T 008630: T 010901: A The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 011924 C 0.27 0.15 0.21 G 0.17 0.11 0.14 T 0.56 0.74 0.65 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000190 00000 ------------ C 0.93 0.80 0.86 T 0.07 0.20 0.14 0000 --- --- --- --- 000247 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000260 00000 ------------ G 0.95 0.98 0.97 A 0.05 0.02 0.03 0000 --- --- --- --- 000337 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 000916 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001054 00000 ------------ A 0.57 0.74 0.65 G 0.43 0.26 0.35 0000 --- --- --- --- 001062 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 001175 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001178 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001262 00000 ------------ G 0.83 0.97 0.89 A 0.17 0.03 0.11 0000 --- --- --- --- 001277 00000 ------------ - 0.89 1.00 0.94 + 0.11 0.00 0.06 0000 --- --- --- --- 001399 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001419 00000 ------------ G 0.83 0.69 0.77 T 0.17 0.31 0.23 0000 --- --- --- --- 001449 00000 ------------ G 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 001474 00000 ------------ G 0.83 0.72 0.78 C 0.17 0.28 0.22 0000 --- --- --- --- 001505 00000 ------------ G 0.89 0.69 0.80 C 0.11 0.31 0.20 0000 --- --- --- --- 001661 00000 ------------ T 0.83 1.00 0.90 A 0.17 0.00 0.10 0000 --- --- --- --- 001999 00000 ------------ C 0.92 0.89 0.90 T 0.08 0.11 0.10 0000 --- --- --- --- 002120 00000 ------------ T 0.80 0.96 0.88 C 0.20 0.04 0.12 0000 --- --- --- --- 002174 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 002192 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 002221 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 002252 00000 ------------ - 0.11 0.02 0.07 + 0.89 0.98 0.93 0000 --- --- --- --- 002307 00000 ------------ C 0.58 0.46 0.51 T 0.42 0.54 0.49 0000 --- --- --- --- 002342 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 002397 00000 ------------ C 1.00 0.91 0.96 G 0.00 0.09 0.04 0000 --- --- --- --- 002567 00000 ------------ C 0.70 0.98 0.84 T 0.30 0.02 0.16 0000 --- --- --- --- 002646 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 002690 00000 ------------ A 0.63 0.65 0.64 G 0.37 0.35 0.36 0000 --- --- --- --- 002704 00000 ------------ A 0.72 0.63 0.67 G 0.28 0.37 0.33 0000 --- --- --- --- 002711 00000 ------------ - 0.33 0.52 0.42 + 0.67 0.48 0.58 0000 --- --- --- --- 002780 00000 ------------ C 0.76 0.89 0.82 T 0.24 0.11 0.18 0000 --- --- --- --- 002838 00000 ------------ G 0.76 1.00 0.88 C 0.24 0.00 0.12 0000 --- --- --- --- 002853 00000 ------------ C 0.76 1.00 0.88 T 0.24 0.00 0.12 0000 --- --- --- --- 002873 00000 ------------ G 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 002895 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002922 00000 ------------ T 0.74 0.65 0.70 C 0.26 0.35 0.30 0000 --- --- --- --- 002941 00000 ------------ G 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 003045 00000 ------------ G 0.96 0.91 0.93 A 0.04 0.09 0.07 0000 --- --- --- --- 003051 00000 ------------ T 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 003190 00000 ------------ C 0.72 0.65 0.68 A 0.28 0.35 0.32 0000 --- --- --- --- 003223 00000 ------------ G 0.74 0.98 0.86 A 0.26 0.02 0.14 0000 --- --- --- --- 003357 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 003367 00000 ------------ G 0.65 0.63 0.64 A 0.35 0.37 0.36 0000 --- --- --- --- 003396 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003403 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003408 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003503 00000 ------------ T 0.52 0.50 0.51 C 0.48 0.50 0.49 0000 --- --- --- --- 003534 00000 ------------ C 0.98 0.95 0.97 T 0.02 0.05 0.03 0000 --- --- --- --- 003678 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 003847 00271 NON-SYN G 1.00 0.98 0.99 C 0.00 0.02 0.01 0090 GAC CAC ASP(D) HIS(H) 003888 00312 NON-SYN C 0.94 1.00 0.97 G 0.06 0.00 0.03 0103 AAC AAG ASN(N) LYS(K) 003924 00000 ------------ C 0.81 0.76 0.79 T 0.19 0.24 0.21 0000 --- --- --- --- 004093 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004312 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004733 00617 NON-SYN G 0.94 1.00 0.97 A 0.06 0.00 0.03 0205 CGG CAG ARG(R) GLN(Q) 004897 00000 ------------ G 0.69 1.00 0.84 A 0.31 0.00 0.16 0000 --- --- --- --- 004898 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004962 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005081 00762 SYNON C 0.65 0.76 0.71 T 0.35 0.24 0.29 0253 TTC TTT PHE(F) PHE(F) 005280 00000 ------------ C 0.35 0.74 0.54 T 0.65 0.26 0.46 0000 --- --- --- --- 005331 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005358 00000 ------------ A 0.35 0.74 0.54 G 0.65 0.26 0.46 0000 --- --- --- --- 005408 00000 ------------ T 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 005424 00000 ------------ G 0.52 0.76 0.64 A 0.48 0.24 0.36 0000 --- --- --- --- 005436 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005598 00000 ------------ A 0.74 0.36 0.56 G 0.26 0.64 0.44 0000 --- --- --- --- 005599 00000 ------------ A 0.74 0.33 0.55 C 0.26 0.67 0.45 0000 --- --- --- --- 005641 00000 ------------ A 0.74 0.34 0.54 G 0.26 0.66 0.46 0000 --- --- --- --- 005994 00000 ------------ C 0.93 0.87 0.90 T 0.07 0.13 0.10 0000 --- --- --- --- 006286 00000 ------------ C 0.96 0.97 0.96 T 0.04 0.03 0.04 0000 --- --- --- --- 006364 00000 ------------ G 0.63 0.37 0.51 A 0.37 0.63 0.49 0000 --- --- --- --- 006373 00000 ------------ C 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 006686 00000 ------------ C 0.75 0.39 0.57 T 0.25 0.61 0.43 0000 --- --- --- --- 006968 00000 ------------ G 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 007249 00000 ------------ G 0.70 0.38 0.55 A 0.30 0.62 0.45 0000 --- --- --- --- 007270 00000 ------------ G 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 007283 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 007470 01047 SYNON C 0.94 1.00 0.97 A 0.06 0.00 0.03 0348 CGC CGA ARG(R) ARG(R) 007682 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007718 00000 ------------ A 0.86 1.00 0.93 G 0.14 0.00 0.07 0000 --- --- --- --- 007784 00000 ------------ C 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 007785 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 008084 00000 ------------ A 0.70 1.00 0.84 G 0.30 0.00 0.16 0000 --- --- --- --- 008141 00000 ------------ G 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 008436 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 008476 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 008498 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 008942 00000 ------------ C 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 009002 00000 ------------ G 0.67 0.40 0.55 C 0.33 0.60 0.45 0000 --- --- --- --- 009057 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 009080 00000 ------------ A 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 009420 00000 ------------ T 0.89 0.88 0.88 A 0.11 0.12 0.12 0000 --- --- --- --- 009429 00000 ------------ C 0.89 0.87 0.88 G 0.11 0.13 0.12 0000 --- --- --- --- 009461 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 009485 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009809 00000 ------------ C 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- 010209 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010400 01458 SYNON A 1.00 0.78 0.89 G 0.00 0.22 0.11 0485 ACA ACG THR(T) THR(T) 010893 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 011228 00000 ------------ G 0.63 0.60 0.62 A 0.37 0.40 0.38 0000 --- --- --- --- 011238 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011256 00000 ------------ C 0.63 0.60 0.62 T 0.37 0.40 0.38 0000 --- --- --- --- 011340 01695 SYNON C 0.91 1.00 0.95 T 0.09 0.00 0.05 0564 CCC CCT PRO(P) PRO(P) 011507 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011807 02053 3' UTR T 0.78 0.70 0.74 C 0.22 0.30 0.26 0000 --- --- --- --- 012033 02279 3' UTR C 0.96 0.87 0.91 T 0.04 0.13 0.09 0000 --- --- --- --- 012056 02302 3' UTR - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 012114 02360 3' UTR - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 012286 02532 3' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 012530 00000 ------------ A 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 012632 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 012756 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 012799 00000 ------------ A 0.84 0.97 0.90 T 0.16 0.03 0.10 0000 --- --- --- --- 013266 00000 ------------ C 0.82 0.88 0.85 T 0.18 0.12 0.15 0000 --- --- --- --- 013394 00000 ------------ C 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000337: AAAG 001277: TG 002252: AA 002711: GA 012056: GG 012114: GTT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000589 00000 ------------ T 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 000660 00000 ------------ T 0.85 0.89 0.87 G 0.15 0.11 0.13 0000 --- --- --- --- 000782 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 000983 00000 ------------ A 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 002050 00051 5' UTR C 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 002161 00000 ------------ A 0.85 0.26 0.58 C 0.15 0.74 0.42 0000 --- --- --- --- 002556 00000 ------------ A 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 002657 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 002680 00000 ------------ - 0.17 0.02 0.09 + 0.83 0.98 0.91 0000 --- --- --- --- 002689 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 002759 00000 ------------ G 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 002787 00000 ------------ G 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 002821 00000 ------------ - 0.90 1.00 0.95 + 0.10 0.00 0.05 0000 --- --- --- --- 002840 00000 ------------ A 0.54 0.89 0.71 C 0.46 0.11 0.29 0000 --- --- --- --- 002914 00000 ------------ A 0.85 0.27 0.58 G 0.15 0.73 0.42 0000 --- --- --- --- 003050 00000 ------------ G 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 003129 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003254 00000 ------------ A 0.59 0.76 0.68 G 0.41 0.24 0.32 0000 --- --- --- --- 003276 00000 ------------ G 0.86 1.00 0.93 A 0.14 0.00 0.07 0000 --- --- --- --- 003307 00000 ------------ T 0.98 0.89 0.93 C 0.02 0.11 0.07 0000 --- --- --- --- 003447 00000 ------------ G 0.95 0.98 0.97 A 0.05 0.02 0.03 0000 --- --- --- --- 003517 00000 ------------ A 0.82 0.98 0.90 G 0.18 0.02 0.10 0000 --- --- --- --- 003679 00000 ------------ T 0.98 0.89 0.94 C 0.02 0.11 0.06 0000 --- --- --- --- 003966 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003989 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 004108 00000 ------------ C 0.80 0.32 0.56 G 0.20 0.68 0.44 0000 --- --- --- --- 004431 00000 ------------ A 0.84 0.32 0.58 T 0.16 0.68 0.42 0000 --- --- --- --- 004513 00000 ------------ A 0.80 0.76 0.78 T 0.20 0.24 0.22 0000 --- --- --- --- 004843 00000 ------------ C 0.77 0.98 0.87 T 0.23 0.02 0.13 0000 --- --- --- --- 004965 00000 ------------ G 0.77 0.98 0.87 A 0.23 0.02 0.13 0000 --- --- --- --- 005024 00000 ------------ C 0.77 0.98 0.87 T 0.23 0.02 0.13 0000 --- --- --- --- 005404 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005413 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005422 00000 ------------ - 0.96 0.89 0.92 + 0.04 0.11 0.08 0000 --- --- --- --- 005562 00000 ------------ C 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- 005580 00000 ------------ G 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 006056 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006067 00000 ------------ C 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 006226 00000 ------------ T 0.61 0.86 0.74 C 0.39 0.14 0.26 0000 --- --- --- --- 006315 00000 ------------ A 0.89 1.00 0.95 T 0.11 0.00 0.05 0000 --- --- --- --- 006511 00000 ------------ G 0.83 0.74 0.79 A 0.17 0.26 0.21 0000 --- --- --- --- 006601 00000 ------------ G 0.98 0.52 0.76 A 0.02 0.48 0.24 0000 --- --- --- --- 006643 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006689 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 006792 00000 ------------ A 0.61 0.50 0.55 C 0.39 0.50 0.45 0000 --- --- --- --- 007017 00000 ------------ C 0.81 0.98 0.89 T 0.19 0.02 0.11 0000 --- --- --- --- 007197 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 007476 00000 ------------ A 0.64 0.87 0.76 G 0.36 0.13 0.24 0000 --- --- --- --- 007704 00000 ------------ C 0.63 0.87 0.75 T 0.37 0.13 0.25 0000 --- --- --- --- 007736 00000 ------------ C 0.93 0.52 0.73 T 0.07 0.48 0.27 0000 --- --- --- --- 007814 00000 ------------ C 0.83 0.74 0.78 T 0.17 0.26 0.22 0000 --- --- --- --- 009074 00000 ------------ G 0.53 0.55 0.54 A 0.47 0.45 0.46 0000 --- --- --- --- 009151 00000 ------------ C 0.97 0.98 0.98 T 0.03 0.02 0.02 0000 --- --- --- --- 009276 00000 ------------ G 0.83 0.39 0.62 A 0.17 0.61 0.38 0000 --- --- --- --- 009635 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009788 00000 ------------ A 0.96 0.91 0.93 G 0.04 0.09 0.07 0000 --- --- --- --- 010214 00000 ------------ A 0.81 0.63 0.72 G 0.19 0.37 0.28 0000 --- --- --- --- 010312 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010325 00000 ------------ G 0.96 0.89 0.93 C 0.04 0.11 0.07 0000 --- --- --- --- 010356 00000 ------------ G 0.48 0.57 0.52 A 0.52 0.43 0.48 0000 --- --- --- --- 010404 00000 ------------ T 1.00 0.89 0.95 G 0.00 0.11 0.05 0000 --- --- --- --- 010644 00000 ------------ C 0.58 0.57 0.57 A 0.42 0.43 0.43 0000 --- --- --- --- 010737 00000 ------------ T 0.85 0.76 0.80 C 0.15 0.24 0.20 0000 --- --- --- --- 011024 00000 ------------ C 1.00 0.88 0.94 T 0.00 0.12 0.06 0000 --- --- --- --- 011188 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 011237 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 011303 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 011441 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 011469 00000 ------------ C 0.96 0.88 0.92 A 0.04 0.12 0.08 0000 --- --- --- --- 011863 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 011882 00000 ------------ T 0.48 0.59 0.53 C 0.52 0.41 0.47 0000 --- --- --- --- 011889 00000 ------------ A 0.48 0.59 0.53 T 0.52 0.41 0.47 0000 --- --- --- --- 011916 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 012077 00000 ------------ C 0.83 0.98 0.90 T 0.17 0.02 0.10 0000 --- --- --- --- 012087 00000 ------------ A 0.96 0.89 0.92 T 0.04 0.11 0.08 0000 --- --- --- --- 012113 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 012290 00000 ------------ T 0.43 0.59 0.51 C 0.57 0.41 0.49 0000 --- --- --- --- 012291 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 012454 00000 ------------ T 0.46 0.57 0.51 C 0.54 0.42 0.49 0000 --- --- --- --- 012504 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012565 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012585 00000 ------------ C 0.46 0.57 0.51 T 0.54 0.42 0.49 0000 --- --- --- --- 012703 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 012879 00000 ------------ G 0.48 0.57 0.52 A 0.52 0.42 0.48 0000 --- --- --- --- 013025 00000 ------------ - 0.02 0.35 0.17 + 0.98 0.65 0.83 0000 --- --- --- --- 013106 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013151 00000 ------------ G 0.98 0.68 0.84 A 0.02 0.32 0.16 0000 --- --- --- --- 013209 00000 ------------ A 0.82 1.00 0.91 G 0.18 0.00 0.09 0000 --- --- --- --- 013405 00000 ------------ C 0.57 0.42 0.50 T 0.43 0.57 0.50 0000 --- --- --- --- 013474 00000 ------------ G 0.45 0.57 0.51 C 0.55 0.42 0.49 0000 --- --- --- --- 013625 00000 ------------ T 0.45 0.57 0.51 A 0.55 0.42 0.49 0000 --- --- --- --- 013798 00000 ------------ T 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 013892 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 014076 00000 ------------ G 1.00 0.87 0.94 T 0.00 0.13 0.06 0000 --- --- --- --- 014345 00000 ------------ C 0.96 0.89 0.93 T 0.04 0.11 0.07 0000 --- --- --- --- 014550 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 014737 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 015275 00000 ------------ T 0.81 0.98 0.89 C 0.19 0.02 0.11 0000 --- --- --- --- 015285 00000 ------------ T 0.58 0.57 0.58 C 0.42 0.43 0.42 0000 --- --- --- --- 015678 00000 ------------ G 0.60 0.55 0.58 A 0.40 0.45 0.42 0000 --- --- --- --- 015730 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015796 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015908 00000 ------------ C 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 016324 00000 ------------ C 0.96 0.89 0.93 T 0.04 0.11 0.07 0000 --- --- --- --- 016589 00000 ------------ C 0.62 0.54 0.59 T 0.38 0.46 0.41 0000 --- --- --- --- 016619 00000 ------------ G 1.00 0.87 0.94 A 0.00 0.13 0.06 0000 --- --- --- --- 016630 00000 ------------ C 1.00 0.87 0.94 T 0.00 0.13 0.06 0000 --- --- --- --- 016634 00000 ------------ G 0.62 0.67 0.65 T 0.38 0.33 0.35 0000 --- --- --- --- 016647 00000 ------------ G 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 016852 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017120 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 017706 00000 ------------ T 0.96 0.89 0.93 G 0.04 0.11 0.07 0000 --- --- --- --- 017813 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 017971 00000 ------------ G 0.96 0.89 0.92 A 0.04 0.11 0.08 0000 --- --- --- --- 017979 00000 ------------ C 0.60 0.57 0.59 A 0.40 0.43 0.41 0000 --- --- --- --- 018659 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 018670 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 018777 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 018881 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 019242 00000 ------------ A 0.98 0.76 0.88 G 0.02 0.24 0.12 0000 --- --- --- --- 019368 00000 ------------ G 0.88 0.76 0.82 C 0.12 0.24 0.18 0000 --- --- --- --- 019529 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 019857 00000 ------------ T 0.98 0.70 0.84 C 0.02 0.30 0.16 0000 --- --- --- --- 019959 00000 ------------ G 0.92 0.68 0.80 T 0.08 0.32 0.20 0000 --- --- --- --- 020158 00000 ------------ C 0.98 0.89 0.93 T 0.02 0.11 0.07 0000 --- --- --- --- 020176 00000 ------------ G 0.75 0.80 0.77 T 0.25 0.20 0.23 0000 --- --- --- --- 020437 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 020721 00000 ------------ - 0.58 0.46 0.52 + 0.42 0.54 0.48 0000 --- --- --- --- 020795 00000 ------------ G 0.74 1.00 0.86 A 0.26 0.00 0.14 0000 --- --- --- --- 021023 00000 ------------ A 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- 021030 00000 ------------ - 0.04 0.11 0.07 + 0.96 0.89 0.93 0000 --- --- --- --- 021112 00000 ------------ A 1.00 0.87 0.94 T 0.00 0.13 0.06 0000 --- --- --- --- 021406 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 021454 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 021684 00000 ------------ C 0.67 0.59 0.63 T 0.33 0.41 0.37 0000 --- --- --- --- 021875 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021927 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 022611 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 022634 00000 ------------ G 0.98 0.70 0.84 C 0.02 0.30 0.16 0000 --- --- --- --- 022666 00000 ------------ C 0.56 0.78 0.67 T 0.44 0.22 0.33 0000 --- --- --- --- 022744 00000 ------------ G 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 022996 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023125 00000 ------------ G 0.95 0.93 0.94 A 0.05 0.07 0.06 0000 --- --- --- --- 023148 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 023331 00000 ------------ G 0.95 0.57 0.75 T 0.05 0.43 0.25 0000 --- --- --- --- 023366 00000 ------------ A 0.81 1.00 0.91 T 0.19 0.00 0.09 0000 --- --- --- --- 023489 00000 ------------ G 1.00 0.87 0.93 A 0.00 0.13 0.07 0000 --- --- --- --- 023504 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 023607 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 023742 00000 ------------ C 0.77 1.00 0.88 A 0.23 0.00 0.12 0000 --- --- --- --- 023745 00000 ------------ G 0.77 1.00 0.88 T 0.23 0.00 0.12 0000 --- --- --- --- 024040 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 024265* 024326 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 024364 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 024542 00000 ------------ C 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 024606 00000 ------------ A 0.77 1.00 0.88 G 0.23 0.00 0.12 0000 --- --- --- --- 024649 00000 ------------ C 0.96 0.95 0.96 A 0.04 0.05 0.04 0000 --- --- --- --- 024703 00000 ------------ T 0.77 1.00 0.88 G 0.23 0.00 0.12 0000 --- --- --- --- 024741 00000 ------------ C 0.98 0.95 0.97 T 0.02 0.05 0.03 0000 --- --- --- --- 024851 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 024897 00000 ------------ C 0.46 0.54 0.50 A 0.54 0.46 0.50 0000 --- --- --- --- 025184 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 025317 00000 ------------ - 0.77 1.00 0.88 + 0.23 0.00 0.12 0000 --- --- --- --- 025462 00000 ------------ C 0.77 1.00 0.88 A 0.23 0.00 0.12 0000 --- --- --- --- 025634 00000 ------------ A 0.77 1.00 0.88 G 0.23 0.00 0.12 0000 --- --- --- --- 025757 00000 ------------ A 0.77 1.00 0.88 G 0.23 0.00 0.12 0000 --- --- --- --- 025758 00000 ------------ T 0.77 1.00 0.88 C 0.23 0.00 0.12 0000 --- --- --- --- 025785 00000 ------------ T 0.77 1.00 0.88 C 0.23 0.00 0.12 0000 --- --- --- --- 025858 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 025871 00000 ------------ A 0.98 0.70 0.84 T 0.02 0.30 0.16 0000 --- --- --- --- 025882 00000 ------------ C 0.77 1.00 0.88 T 0.23 0.00 0.12 0000 --- --- --- --- 025953 00000 ------------ G 0.77 1.00 0.88 A 0.23 0.00 0.12 0000 --- --- --- --- 026357 00000 ------------ A 1.00 0.87 0.94 C 0.00 0.13 0.06 0000 --- --- --- --- 026736 00000 ------------ A 0.78 0.85 0.81 G 0.23 0.15 0.19 0000 --- --- --- --- 026830 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 026982 00000 ------------ A 0.82 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 027010 00000 ------------ G 0.95 0.95 0.95 A 0.05 0.05 0.05 0000 --- --- --- --- 027052 00000 ------------ C 1.00 0.70 0.85 A 0.00 0.30 0.15 0000 --- --- --- --- 027568 00000 ------------ T 0.98 0.65 0.83 C 0.02 0.35 0.17 0000 --- --- --- --- 027690 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 028107 00000 ------------ G 1.00 0.87 0.94 T 0.00 0.13 0.06 0000 --- --- --- --- 028226 00000 ------------ T 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 028399 00000 ------------ A 0.73 0.95 0.84 G 0.27 0.05 0.16 0000 --- --- --- --- 028531 00000 ------------ A 0.73 0.95 0.84 G 0.27 0.05 0.16 0000 --- --- --- --- 028733 00000 ------------ G 0.64 0.57 0.60 T 0.36 0.43 0.40 0000 --- --- --- --- 029087 00000 ------------ A 0.75 0.96 0.85 G 0.25 0.04 0.15 0000 --- --- --- --- 029443 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 029500 00000 ------------ G 0.85 0.98 0.92 A 0.15 0.02 0.08 0000 --- --- --- --- 029668 00000 ------------ G 0.70 0.95 0.83 A 0.30 0.05 0.17 0000 --- --- --- --- 029912 00000 ------------ T 0.54 0.48 0.51 C 0.46 0.52 0.49 0000 --- --- --- --- 029963 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 029994 00000 ------------ G 0.85 0.70 0.78 A 0.15 0.30 0.22 0000 --- --- --- --- 030104 00000 ------------ A 0.98 0.95 0.97 G 0.02 0.05 0.03 0000 --- --- --- --- 030163 00000 ------------ T 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 030231 00000 ------------ A 0.92 0.52 0.73 G 0.08 0.48 0.27 0000 --- --- --- --- 030816 00779 3' UTR A 0.79 1.00 0.89 G 0.21 0.00 0.11 0000 --- --- --- --- 031137 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 031151 00000 ------------ A 0.96 0.93 0.95 G 0.04 0.07 0.05 0000 --- --- --- --- 031310 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031454 00000 ------------ T 0.98 0.65 0.82 G 0.02 0.35 0.18 0000 --- --- --- --- 031501 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 031504 00000 ------------ G 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 031894 00000 ------------ G 0.96 0.98 0.97 C 0.04 0.02 0.03 0000 --- --- --- --- 031961 00000 ------------ G 0.80 0.98 0.89 A 0.20 0.02 0.11 0000 --- --- --- --- 032005 00000 ------------ C 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 032259 00000 ------------ G 0.96 0.91 0.93 C 0.04 0.09 0.07 0000 --- --- --- --- 032371 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 032729 00000 ------------ G 0.91 0.70 0.81 A 0.09 0.30 0.19 0000 --- --- --- --- 032739 00000 ------------ C 0.80 1.00 0.90 T 0.20 0.00 0.10 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002657: T 002680: T 002821: AAC 005422: AC 013025: C 020721: AGAGAAAGCTGAAG 021030: A 025317: ACCT The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 024265 A 0.23 0.00 0.12 C 0.06 0.11 0.09 G 0.71 0.89 0.80 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000292 00000 ------------ T 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 000310 00000 ------------ G 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 000417 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 000422 00000 ------------ C 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 000450 00000 ------------ A 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 000453 00000 ------------ A 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 000526 00000 ------------ C 0.63 0.45 0.54 G 0.37 0.55 0.46 0000 --- --- --- --- 000677 00124 5' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000757 00204 5' UTR G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 000773 00220 5' UTR - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 000831 00278 5' UTR - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 000938 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002194 00000 ------------ C 1.00 0.78 0.89 T 0.00 0.22 0.11 0000 --- --- --- --- 002196 00000 ------------ C 1.00 0.78 0.89 T 0.00 0.22 0.11 0000 --- --- --- --- 002198 00000 ------------ T 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 002283 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002393 00000 ------------ G 0.60 0.50 0.55 T 0.40 0.50 0.45 0000 --- --- --- --- 002540 00000 ------------ G 0.83 0.50 0.67 A 0.17 0.50 0.33 0000 --- --- --- --- 003185 00000 ------------ T 0.88 0.76 0.81 G 0.12 0.24 0.19 0000 --- --- --- --- 004422 00000 ------------ C 0.61 0.48 0.54 G 0.39 0.52 0.46 0000 --- --- --- --- 004545 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004977 00615 NON-SYN G 0.70 0.52 0.61 T 0.30 0.48 0.39 0108 GCT TCT ALA(A) SER(S) 005009 00647 SYNON C 0.89 1.00 0.94 T 0.11 0.00 0.06 0118 TCC TCT SER(S) SER(S) 005084 00722 SYNON T 0.61 0.50 0.56 C 0.39 0.50 0.44 0143 CGT CGC ARG(R) ARG(R) 005125 00000 ------------ - 0.02 0.02 0.02 + 0.98 0.98 0.98 0000 --- --- --- --- 005132 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005264 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 005394 00825 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0178 GCA ACA ALA(A) THR(T) 005530 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 005780 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 006179 00000 ------------ T 0.65 0.98 0.81 A 0.35 0.02 0.19 0000 --- --- --- --- 006262 00000 ------------ G 0.97 0.71 0.83 C 0.03 0.29 0.17 0000 --- --- --- --- 006361 00000 ------------ G 1.00 0.96 0.97 A 0.00 0.04 0.03 0000 --- --- --- --- 006703 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 006897 00000 ------------ A 0.82 0.57 0.70 C 0.17 0.43 0.30 0000 --- --- --- --- 007048 00000 ------------ C 0.65 0.45 0.55 A 0.35 0.55 0.45 0000 --- --- --- --- 007202 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007284 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 007409 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007572 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007573 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007575 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007577 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008052 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008070 00000 ------------ G 1.00 0.79 0.90 C 0.00 0.21 0.10 0000 --- --- --- --- 008190 00000 ------------ C 0.93 1.00 0.96 G 0.07 0.00 0.04 0000 --- --- --- --- 008923 00000 ------------ C 0.62 0.97 0.78 T 0.38 0.03 0.22 0000 --- --- --- --- 008938 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009042 00000 ------------ C 0.56 0.48 0.52 T 0.44 0.52 0.48 0000 --- --- --- --- 009261 00000 ------------ G 0.86 0.55 0.70 A 0.14 0.45 0.30 0000 --- --- --- --- 009317 00866 SYNON G 0.94 1.00 0.97 A 0.06 0.00 0.03 0191 CCG CCA PRO(P) PRO(P) 009435 00984 NON-SYN G 0.85 0.55 0.71 A 0.15 0.45 0.29 0231 GTC ATC VAL(V) ILE(I) 009437 00986 SYNON C 1.00 0.98 0.99 T 0.00 0.02 0.01 0231 GTC GTT VAL(V) VAL(V) 009612 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009638 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009826 00000 ------------ C 0.56 0.48 0.52 T 0.44 0.52 0.48 0000 --- --- --- --- 009837 00000 ------------ G 0.56 0.48 0.52 C 0.44 0.52 0.48 0000 --- --- --- --- 009840 00000 ------------ T 0.56 0.48 0.52 C 0.44 0.52 0.48 0000 --- --- --- --- 009851 00000 ------------ C 0.56 0.48 0.52 A 0.44 0.52 0.48 0000 --- --- --- --- 009854 00000 ------------ T 0.56 0.48 0.52 G 0.44 0.52 0.48 0000 --- --- --- --- 009916 00000 ------------ C 0.50 0.65 0.57 G 0.50 0.35 0.43 0000 --- --- --- --- 010254 00000 ------------ T 0.93 0.98 0.95 C 0.07 0.02 0.05 0000 --- --- --- --- 010275 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 010279 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 010284 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 010285 00000 ------------ T 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 010305 00000 ------------ - 0.40 0.52 0.46 + 0.60 0.48 0.54 0000 --- --- --- --- 010335 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 010854 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 010875 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 011151 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 011152 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 011164 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 011300 00000 ------------ T 0.85 0.52 0.70 C 0.15 0.48 0.30 0000 --- --- --- --- 011651 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 011668 00000 ------------ C 0.55 0.48 0.51 G 0.45 0.52 0.49 0000 --- --- --- --- 011720 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011821 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 011832 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012157 01213 NON-SYN A 0.94 1.00 0.97 G 0.06 0.00 0.03 0307 TAC TGC TYR(Y) CYS(C) 012218 01274 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0327 TCC TCT SER(S) SER(S) 012338 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012347 00000 ------------ G 1.00 0.89 0.95 A 0.00 0.11 0.05 0000 --- --- --- --- 012593 01426 3' UTR C 0.79 0.54 0.67 A 0.21 0.46 0.33 0000 --- --- --- --- 012607 01440 3' UTR T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 012632 01465 3' UTR T 0.79 0.54 0.67 C 0.21 0.46 0.33 0000 --- --- --- --- 012875 01708 3' UTR A 0.85 0.54 0.70 T 0.15 0.46 0.30 0000 --- --- --- --- 012877 01710 3' UTR T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 013385 02218 3' UTR T 0.86 0.48 0.66 G 0.14 0.52 0.34 0000 --- --- --- --- 013537 02370 3' UTR T 0.76 0.54 0.65 C 0.24 0.46 0.35 0000 --- --- --- --- 013702 02535 3' UTR T 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 013740 02573 3' UTR T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 014682 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 014775 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 014897 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 014966 00000 ------------ T 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 015309 00000 ------------ - 0.83 0.48 0.66 + 0.17 0.52 0.34 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000773: A 000831: G 005125: AG 005780: AGCCAGAAGCTTTGAGCAACATCCTTCAAGGCCGAC 010305: T 015309: TA Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000310 00000 ------------ A 0.86 0.98 0.92 T 0.14 0.02 0.08 0000 --- --- --- --- 000321 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000673 00000 ------------ G 0.97 0.47 0.70 A 0.03 0.53 0.30 0000 --- --- --- --- 001302 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 001324 00000 ------------ C 0.96 0.90 0.94 G 0.04 0.10 0.06 0000 --- --- --- --- 001696 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 001729 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001732 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001805 00000 ------------ G 0.56 0.68 0.62 C 0.44 0.32 0.38 0000 --- --- --- --- 002247 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 002388 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002445 00000 ------------ C 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 002751* 002998 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003819 00372 SYNON C 0.96 1.00 0.98 T 0.04 0.00 0.02 0047 CCC CCT PRO(P) PRO(P) 003946 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005141 00000 ------------ A 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 005179 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005882 00588 SYNON T 1.00 0.66 0.83 C 0.00 0.34 0.17 0119 TTT TTC PHE(F) PHE(F) 006136 00000 ------------ C 0.67 0.93 0.80 G 0.33 0.07 0.20 0000 --- --- --- --- 006150 00000 ------------ T 0.67 0.93 0.80 C 0.33 0.07 0.20 0000 --- --- --- --- 006214 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006325 00788 NON-SYN A 0.65 0.93 0.79 G 0.35 0.07 0.21 0186 CAC CGC HIS(H) ARG(R) 006417 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 006731 00000 ------------ G 0.67 0.93 0.80 T 0.33 0.07 0.20 0000 --- --- --- --- 006826 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006994 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 006995 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 007013 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007060 00000 ------------ G 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 007100 00000 ------------ T 0.74 0.98 0.86 A 0.26 0.02 0.14 0000 --- --- --- --- 007101 00000 ------------ C 0.74 0.98 0.86 A 0.26 0.02 0.14 0000 --- --- --- --- 007121 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 007157 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 007186 00000 ------------ G 0.69 0.93 0.82 A 0.31 0.07 0.18 0000 --- --- --- --- 007864 00000 ------------ C 0.82 0.98 0.90 G 0.18 0.02 0.10 0000 --- --- --- --- 008000 00000 ------------ A 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 008111 00000 ------------ G 0.83 0.98 0.90 A 0.17 0.02 0.10 0000 --- --- --- --- 008112 00000 ------------ A 0.59 0.65 0.62 T 0.41 0.35 0.38 0000 --- --- --- --- 008279 00000 ------------ G 0.70 0.98 0.84 T 0.30 0.02 0.16 0000 --- --- --- --- 008333 00000 ------------ C 0.96 0.48 0.72 G 0.04 0.52 0.28 0000 --- --- --- --- 008376 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 008922 00000 ------------ G 0.75 0.97 0.88 A 0.25 0.03 0.12 0000 --- --- --- --- 009422 00000 ------------ C 0.96 0.52 0.74 T 0.04 0.48 0.26 0000 --- --- --- --- 009456 00000 ------------ G 0.64 0.61 0.62 A 0.36 0.39 0.38 0000 --- --- --- --- 009771 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009946 00000 ------------ C 0.96 0.48 0.72 T 0.04 0.52 0.28 0000 --- --- --- --- 010054 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 010152 00000 ------------ G 0.55 0.60 0.58 C 0.45 0.40 0.42 0000 --- --- --- --- 010154 00000 ------------ G 0.75 0.91 0.82 A 0.25 0.09 0.18 0000 --- --- --- --- 010421 00000 ------------ C 0.83 0.98 0.90 T 0.17 0.02 0.10 0000 --- --- --- --- 010580 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 010619 00000 ------------ G 0.47 0.57 0.53 C 0.53 0.43 0.47 0000 --- --- --- --- 010654 00000 ------------ G 0.55 0.50 0.52 A 0.45 0.50 0.48 0000 --- --- --- --- 010782 00000 ------------ A 0.54 0.61 0.57 C 0.46 0.39 0.43 0000 --- --- --- --- 010787 00000 ------------ G 0.83 0.98 0.90 A 0.17 0.02 0.10 0000 --- --- --- --- 011130 01054 NON-SYN C 0.83 0.98 0.90 G 0.17 0.02 0.10 0275 CAG GAG GLN(Q) GLU(E) 011386 00000 ------------ G 0.85 0.98 0.91 A 0.15 0.02 0.09 0000 --- --- --- --- 011568 00000 ------------ G 0.55 0.90 0.72 A 0.45 0.10 0.28 0000 --- --- --- --- 011861 01342 SYNON C 0.96 1.00 0.98 T 0.04 0.00 0.02 0371 CTG TTG LEU(L) LEU(L) 012106 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012591 00000 ------------ C 0.70 1.00 0.83 T 0.30 0.00 0.17 0000 --- --- --- --- 012603 00000 ------------ C 0.72 1.00 0.85 T 0.28 0.00 0.15 0000 --- --- --- --- 012726 00000 ------------ C 0.54 0.60 0.57 T 0.46 0.40 0.43 0000 --- --- --- --- 012760 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 012768 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 012769 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 012806 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012937 00000 ------------ C 0.52 0.91 0.71 G 0.48 0.09 0.29 0000 --- --- --- --- 013084 00000 ------------ G 1.00 0.97 0.98 T 0.00 0.03 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 002751 C 0.77 0.72 0.74 G 0.08 0.00 0.04 T 0.15 0.28 0.21 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000092 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 000157 00000 ------------ G 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 000186 00000 ------------ G 0.57 0.72 0.65 C 0.43 0.28 0.35 0000 --- --- --- --- 000300 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000321 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000617 00000 ------------ A 0.88 0.80 0.84 G 0.12 0.20 0.16 0000 --- --- --- --- 000634 00000 ------------ - 0.89 0.80 0.84 + 0.11 0.20 0.16 0000 --- --- --- --- 000676 00000 ------------ C 0.89 0.80 0.85 A 0.11 0.20 0.15 0000 --- --- --- --- 000733 00000 ------------ T 0.83 0.83 0.83 C 0.17 0.17 0.17 0000 --- --- --- --- 000749 00000 ------------ A 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 000795 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001013 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 001344 00002 5' UTR C 0.95 0.93 0.94 A 0.05 0.07 0.06 0000 --- --- --- --- 001447 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 001777 00000 ------------ C 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- 001918 00000 ------------ T 1.00 0.88 0.95 G 0.00 0.12 0.05 0000 --- --- --- --- 002098 00000 ------------ G 1.00 0.94 0.97 A 0.00 0.06 0.03 0000 --- --- --- --- 002255 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002257 00000 ------------ G 0.89 0.93 0.91 A 0.11 0.07 0.09 0000 --- --- --- --- 002505 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003124 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 003470 00000 ------------ T 1.00 0.95 0.97 C 0.00 0.05 0.03 0000 --- --- --- --- 003634 00000 ------------ A 0.85 0.57 0.69 G 0.15 0.43 0.31 0000 --- --- --- --- 003690 00000 ------------ C 0.89 0.93 0.91 T 0.11 0.07 0.09 0000 --- --- --- --- 003719 00000 ------------ C 0.89 0.93 0.91 G 0.11 0.07 0.09 0000 --- --- --- --- 003819 00000 ------------ A 0.97 0.93 0.95 G 0.03 0.07 0.05 0000 --- --- --- --- 003835 00000 ------------ T 0.97 0.95 0.96 G 0.03 0.05 0.04 0000 --- --- --- --- 003910 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 004252 00000 ------------ A 0.75 0.91 0.83 G 0.25 0.09 0.17 0000 --- --- --- --- 004590 00000 ------------ - 0.02 0.07 0.04 + 0.98 0.93 0.96 0000 --- --- --- --- 004709 00353 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0107 AGT AAT SER(S) ASN(N) 004886 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 004891 00000 ------------ C 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 004892 00000 ------------ G 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 004900 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 004922 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005011 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 006623 00000 ------------ T 0.62 0.72 0.67 C 0.38 0.28 0.33 0000 --- --- --- --- 006781* 006804 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006861 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006900 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 007183 00000 ------------ A 0.95 0.93 0.94 T 0.05 0.07 0.06 0000 --- --- --- --- 007307 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 007333 00000 ------------ A 0.94 0.93 0.93 G 0.06 0.07 0.07 0000 --- --- --- --- 007381 00000 ------------ A 0.82 0.93 0.88 C 0.17 0.07 0.12 0000 --- --- --- --- 007394 00000 ------------ - 0.69 0.48 0.59 + 0.31 0.52 0.41 0000 --- --- --- --- 007395 00000 ------------ C 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 007668 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007673 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007677 00000 ------------ C 0.96 0.93 0.95 T 0.04 0.07 0.05 0000 --- --- --- --- 007859 00000 ------------ A 0.57 0.72 0.65 G 0.43 0.28 0.35 0000 --- --- --- --- 007906 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007976 00000 ------------ T 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 008234 00000 ------------ G 0.80 0.93 0.87 A 0.20 0.07 0.13 0000 --- --- --- --- 008267 00000 ------------ G 0.59 0.72 0.66 T 0.41 0.28 0.34 0000 --- --- --- --- 008415 00000 ------------ T 0.70 0.50 0.60 C 0.30 0.50 0.40 0000 --- --- --- --- 008609 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008640 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008749 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008772 00000 ------------ T 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 008896 00000 ------------ T 0.89 0.54 0.72 G 0.11 0.46 0.28 0000 --- --- --- --- 009042 00000 ------------ A 0.86 1.00 0.93 G 0.14 0.00 0.07 0000 --- --- --- --- 009061 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009572 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 010059 00494 NON-SYN G 0.95 0.93 0.94 A 0.05 0.07 0.06 0154 CGT CAT ARG(R) HIS(H) 010075 00510 SYNON A 0.98 1.00 0.99 G 0.02 0.00 0.01 0159 TCA TCG SER(S) SER(S) 010230 00000 ------------ T 0.91 0.57 0.74 C 0.09 0.43 0.26 0000 --- --- --- --- 010283 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 010979 00000 ------------ C 0.83 0.57 0.70 T 0.17 0.43 0.30 0000 --- --- --- --- 011029 00000 ------------ C 0.61 0.38 0.50 T 0.39 0.62 0.50 0000 --- --- --- --- 011251 00000 ------------ C 0.97 0.95 0.96 T 0.03 0.05 0.04 0000 --- --- --- --- 011303 00000 ------------ T 0.88 0.55 0.70 C 0.12 0.45 0.30 0000 --- --- --- --- 011335 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 011424 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011477 00000 ------------ C 0.35 0.65 0.50 A 0.65 0.35 0.50 0000 --- --- --- --- 011622 00000 ------------ A 0.96 0.93 0.95 C 0.04 0.07 0.05 0000 --- --- --- --- 011636 00000 ------------ T 0.96 0.93 0.95 G 0.04 0.07 0.05 0000 --- --- --- --- 011746 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 011789 00000 ------------ C 0.65 0.36 0.51 G 0.35 0.64 0.49 0000 --- --- --- --- 011820 00000 ------------ C 0.96 0.93 0.95 T 0.04 0.07 0.05 0000 --- --- --- --- 011890 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011922 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012608 00000 ------------ T 0.37 0.64 0.51 C 0.63 0.36 0.49 0000 --- --- --- --- 012774 00000 ------------ T 0.37 0.64 0.51 G 0.63 0.36 0.49 0000 --- --- --- --- 012948 00000 ------------ T 0.37 0.65 0.52 C 0.63 0.35 0.48 0000 --- --- --- --- 013060 00000 ------------ A 0.37 0.63 0.51 G 0.63 0.37 0.49 0000 --- --- --- --- 013745 00000 ------------ G 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 013755 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 013774 00000 ------------ T 0.91 0.80 0.86 C 0.09 0.20 0.14 0000 --- --- --- --- 014206 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014232 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014383 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014413 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 014502 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014512 00000 ------------ G 0.50 0.70 0.60 A 0.50 0.30 0.40 0000 --- --- --- --- 014544 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014636 00000 ------------ G 0.86 0.57 0.70 A 0.14 0.43 0.30 0000 --- --- --- --- 014657 00000 ------------ C 0.43 0.63 0.53 T 0.57 0.37 0.47 0000 --- --- --- --- 014705 00000 ------------ C 0.95 0.91 0.93 A 0.05 0.09 0.07 0000 --- --- --- --- 014905 00000 ------------ C 0.81 0.78 0.80 T 0.19 0.22 0.20 0000 --- --- --- --- 015320 00000 ------------ C 0.95 0.76 0.85 T 0.05 0.24 0.15 0000 --- --- --- --- 015741 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 015985 00000 ------------ C 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 016121 00829 NON-SYN G 0.50 0.74 0.61 T 0.50 0.26 0.39 0266 GTA TTA VAL(V) LEU(L) 016350 00000 ------------ C 0.90 0.81 0.86 T 0.10 0.19 0.14 0000 --- --- --- --- 016411 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 016412 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016422 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016475 00000 ------------ G 0.75 0.57 0.66 C 0.25 0.43 0.34 0000 --- --- --- --- 016552 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016864 00000 ------------ G 0.77 0.57 0.67 T 0.23 0.43 0.33 0000 --- --- --- --- 017002 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 017193 00000 ------------ T 0.89 0.80 0.85 G 0.11 0.20 0.15 0000 --- --- --- --- 017318 00000 ------------ T 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 017338 00000 ------------ C 0.75 0.55 0.65 A 0.25 0.45 0.35 0000 --- --- --- --- 017500 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 017600 00000 ------------ C 0.73 0.55 0.64 G 0.27 0.45 0.36 0000 --- --- --- --- 018129 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 018224 00000 ------------ G 0.65 0.89 0.77 T 0.35 0.11 0.23 0000 --- --- --- --- 018251 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 018345 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 018355 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 018482 00000 ------------ T 0.82 0.55 0.68 C 0.18 0.45 0.32 0000 --- --- --- --- 018485 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 018532 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 018539 00000 ------------ - 0.16 0.00 0.07 + 0.84 1.00 0.93 0000 --- --- --- --- 018593 01037 NON-SYN G 1.00 0.98 0.99 C 0.00 0.02 0.01 0335 TGG TCG TRP(W) SER(S) 018648 01092 3' UTR T 0.82 0.52 0.67 C 0.18 0.48 0.33 0000 --- --- --- --- 018689 01133 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018904 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 019027 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 019196 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 019394 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 019675 00000 ------------ - 0.57 0.57 0.57 + 0.43 0.43 0.43 0000 --- --- --- --- 019750 00000 ------------ G 0.90 0.86 0.88 A 0.10 0.14 0.12 0000 --- --- --- --- 019789 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019803 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 019936 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 020019 00000 ------------ - 0.69 0.57 0.63 + 0.31 0.43 0.37 0000 --- --- --- --- 020022 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 020112 00000 ------------ T 0.96 0.93 0.95 C 0.04 0.07 0.05 0000 --- --- --- --- 020157 00000 ------------ T 0.90 0.83 0.86 G 0.10 0.17 0.14 0000 --- --- --- --- 020184 00000 ------------ A 0.71 0.57 0.64 T 0.29 0.43 0.36 0000 --- --- --- --- 020246 00000 ------------ T 0.97 0.88 0.92 C 0.03 0.12 0.08 0000 --- --- --- --- 020252 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000634: T 004590: T 007307: G 007394: T 011335: T 011746: A 018539: T 019675: A 020019: C The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 006781 A 0.04 0.00 0.02 C 0.76 0.80 0.78 G 0.20 0.20 0.20 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000118 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 000444 00000 ------------ A 0.76 0.89 0.83 T 0.24 0.11 0.17 0000 --- --- --- --- 000695 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001041 00000 ------------ - 0.00 0.07 0.03 + 1.00 0.93 0.97 0000 --- --- --- --- 001059 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 001174 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001237 00000 ------------ C 0.96 0.54 0.76 G 0.04 0.46 0.24 0000 --- --- --- --- 001239 00000 ------------ C 0.73 0.59 0.66 T 0.27 0.41 0.34 0000 --- --- --- --- 001615 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002153 00191 NON-SYN C 1.00 0.95 0.98 T 0.00 0.05 0.02 0045 GCG GTG ALA(A) VAL(V) 003280 00000 ------------ C 0.70 0.91 0.80 G 0.30 0.09 0.20 0000 --- --- --- --- 003544 00000 ------------ T 0.81 0.22 0.52 C 0.19 0.78 0.48 0000 --- --- --- --- 003545 00000 ------------ A 0.90 0.89 0.89 T 0.10 0.11 0.11 0000 --- --- --- --- 003587 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 003863 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003909 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 003940 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 003961 00000 ------------ - 0.31 0.54 0.43 + 0.69 0.46 0.57 0000 --- --- --- --- 004180 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 004309 00000 ------------ C 1.00 0.95 0.97 T 0.00 0.05 0.03 0000 --- --- --- --- 004612 00000 ------------ T 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 004873 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 005082 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 005094 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 005294 00000 ------------ T 0.96 0.93 0.95 C 0.04 0.07 0.05 0000 --- --- --- --- 005366 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005460 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 005475 00000 ------------ - 0.31 0.07 0.19 + 0.69 0.93 0.81 0000 --- --- --- --- 005485 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005612 00000 ------------ A 0.47 0.93 0.73 G 0.53 0.07 0.27 0000 --- --- --- --- 005618 00000 ------------ G 0.47 0.96 0.74 A 0.53 0.04 0.26 0000 --- --- --- --- 005623 00000 ------------ G 1.00 0.33 0.63 A 0.00 0.67 0.37 0000 --- --- --- --- 005633 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 005812 00000 ------------ G 0.97 0.39 0.65 A 0.03 0.61 0.35 0000 --- --- --- --- 005862 00000 ------------ T 0.50 0.85 0.69 G 0.50 0.15 0.31 0000 --- --- --- --- 006034* 006166 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 006343 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006502 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006561 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006640 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006671 00000 ------------ A 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 006702 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006718 00000 ------------ A 0.40 0.86 0.62 G 0.60 0.14 0.38 0000 --- --- --- --- 006924 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006946 00000 ------------ C 0.74 0.93 0.83 T 0.26 0.07 0.17 0000 --- --- --- --- 006984 00000 ------------ A 0.41 0.88 0.64 G 0.59 0.12 0.36 0000 --- --- --- --- 007994 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008145 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008178 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 008197 00000 ------------ C 0.87 0.93 0.90 T 0.13 0.07 0.10 0000 --- --- --- --- 008270 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 008359 00000 ------------ C 0.70 0.95 0.82 T 0.30 0.05 0.18 0000 --- --- --- --- 008903 00000 ------------ C 0.33 0.95 0.65 T 0.68 0.05 0.35 0000 --- --- --- --- 009206 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 009281 00000 ------------ C 0.40 0.95 0.67 T 0.60 0.05 0.33 0000 --- --- --- --- 009497 00000 ------------ C 0.79 0.23 0.52 T 0.21 0.77 0.48 0000 --- --- --- --- 009622 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 009647 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 009665 00000 ------------ A 0.32 0.80 0.56 C 0.68 0.20 0.44 0000 --- --- --- --- 009979 00000 ------------ T 0.46 0.93 0.69 A 0.54 0.07 0.31 0000 --- --- --- --- 010059* 010389 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011490 00000 ------------ G 0.81 0.95 0.87 A 0.19 0.05 0.13 0000 --- --- --- --- 011818 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012247 00513 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0152 TGC TGT CYS(C) CYS(C) 012285 00551 NON-SYN G 1.00 0.95 0.98 A 0.00 0.05 0.02 0165 GGT GAT GLY(G) ASP(D) 012384 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012489 00000 ------------ G 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 012621 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012632 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012773 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 012913 00000 ------------ - 0.17 0.20 0.18 + 0.83 0.80 0.82 0000 --- --- --- --- 013030 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 013252 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 013805 00933 3' UTR - 0.58 0.93 0.76 + 0.42 0.07 0.24 0000 --- --- --- --- 014106 01234 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014145 01273 3' UTR C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 014256 01384 3' UTR G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 014269 01397 3' UTR T 0.29 0.93 0.61 C 0.71 0.07 0.39 0000 --- --- --- --- 014322 01450 3' UTR C 0.98 0.30 0.65 G 0.02 0.70 0.35 0000 --- --- --- --- 014389 01517 3' UTR A 0.58 0.93 0.76 G 0.42 0.07 0.24 0000 --- --- --- --- 014645 01773 3' UTR C 0.66 0.93 0.80 T 0.34 0.07 0.20 0000 --- --- --- --- 014805 01933 3' UTR A 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- 015078 02206 3' UTR C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 016173 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 016352 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016555 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 016693 00000 ------------ C 0.71 1.00 0.85 T 0.29 0.00 0.15 0000 --- --- --- --- 017287 00000 ------------ C 0.37 0.93 0.65 T 0.63 0.07 0.35 0000 --- --- --- --- 017316 00000 ------------ - 0.88 1.00 0.94 + 0.12 0.00 0.06 0000 --- --- --- --- 017453 00000 ------------ C 0.33 0.93 0.63 G 0.67 0.07 0.37 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001041: C 003961: C 005082: G 005475: C 009622: G 009647: AGAATTG 012773: G 012913: G 013805: AGGGG 016555: GAAG 017316: TGGCATCTGGAGAAGCCTGTTCATTCCA The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 010059 C 0.44 0.93 0.67 G 0.54 0.07 0.32 T 0.02 0.00 0.01 006034 A 0.03 0.00 0.01 G 0.79 0.89 0.85 T 0.18 0.11 0.14 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000042 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 000063 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000450 00000 ------------ G 1.00 0.84 0.93 A 0.00 0.16 0.07 0000 --- --- --- --- 000834 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 000991 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 001443 00000 ------------ G 0.96 0.76 0.86 A 0.04 0.24 0.14 0000 --- --- --- --- 002395 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002487 00000 ------------ A 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 002578 00000 ------------ C 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 002823 00012 5' UTR A 0.56 0.65 0.61 G 0.44 0.35 0.39 0000 --- --- --- --- 002849 00038 5' UTR C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002855 00044 5' UTR C 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 002978 00167 SYNON C 0.83 0.72 0.78 G 0.17 0.28 0.22 0035 CTC CTG LEU(L) LEU(L) 003096 00000 ------------ C 0.79 0.72 0.76 G 0.21 0.28 0.24 0000 --- --- --- --- 003205 00000 ------------ T 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 003835 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 003916 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 004234 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004272 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004686 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 005541 00000 ------------ G 0.53 0.76 0.67 A 0.47 0.24 0.33 0000 --- --- --- --- 005644 00000 ------------ C 0.57 0.62 0.60 T 0.43 0.38 0.40 0000 --- --- --- --- 006326 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006402 00000 ------------ C 0.92 0.70 0.82 G 0.08 0.30 0.18 0000 --- --- --- --- 006530 00189 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0043 GTG ATG VAL(V) MET(M) 006810 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 007242 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007296 00000 ------------ C 0.98 0.83 0.90 T 0.02 0.17 0.10 0000 --- --- --- --- 007371 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 007416 00000 ------------ G 0.79 0.65 0.72 T 0.21 0.35 0.28 0000 --- --- --- --- 007450 00452 SYNON T 0.83 0.65 0.74 C 0.17 0.35 0.26 0130 TTT TTC PHE(F) PHE(F) 007594 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007705 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007771 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008130 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 008576 01156 3' UTR G 0.96 0.87 0.91 T 0.04 0.13 0.09 0000 --- --- --- --- 009437 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 009786 00000 ------------ T 0.96 0.85 0.90 C 0.04 0.15 0.10 0000 --- --- --- --- 010006 00000 ------------ G 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 010092 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 010188 00000 ------------ C 0.69 1.00 0.84 A 0.31 0.00 0.16 0000 --- --- --- --- 010574 00000 ------------ G 0.70 0.82 0.76 A 0.30 0.18 0.24 0000 --- --- --- --- 010665 00000 ------------ G 0.79 0.98 0.88 T 0.21 0.02 0.12 0000 --- --- --- --- 011107 00000 ------------ C 0.88 0.97 0.92 T 0.12 0.03 0.08 0000 --- --- --- --- 011142 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011143 00000 ------------ G 0.79 0.97 0.87 A 0.21 0.03 0.13 0000 --- --- --- --- 011252 00000 ------------ - 0.20 0.45 0.33 + 0.80 0.55 0.67 0000 --- --- --- --- 011271 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 011344 00000 ------------ C 1.00 0.83 0.92 T 0.00 0.17 0.08 0000 --- --- --- --- 011406 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 013121 00000 ------------ G 0.91 0.80 0.86 T 0.09 0.20 0.14 0000 --- --- --- --- 013159 00000 ------------ C 0.88 0.50 0.70 A 0.12 0.50 0.30 0000 --- --- --- --- 013263 00000 ------------ C 0.93 0.80 0.86 G 0.07 0.20 0.14 0000 --- --- --- --- 013483 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 013527 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013590 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 013636 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013644 00000 ------------ C 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 013681 00000 ------------ A 1.00 0.95 0.97 C 0.00 0.05 0.03 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 011252: G 011406: G Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000088 00000 ------------ G 0.98 0.97 0.98 T 0.02 0.03 0.02 0000 --- --- --- --- 000094 00000 ------------ A 0.80 1.00 0.90 G 0.20 0.00 0.10 0000 --- --- --- --- 000275 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000338 00000 ------------ C 0.67 0.78 0.72 T 0.33 0.23 0.28 0000 --- --- --- --- 000734 00000 ------------ C 0.54 0.75 0.63 T 0.46 0.25 0.37 0000 --- --- --- --- 000747 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000762 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000799 00000 ------------ C 0.83 0.76 0.80 T 0.17 0.24 0.20 0000 --- --- --- --- 001225 00000 ------------ C 0.87 1.00 0.93 T 0.13 0.00 0.07 0000 --- --- --- --- 001354 00000 ------------ T 0.37 0.78 0.58 C 0.63 0.22 0.42 0000 --- --- --- --- 001376 00000 ------------ C 0.57 1.00 0.78 T 0.43 0.00 0.22 0000 --- --- --- --- 001389 00000 ------------ G 0.57 1.00 0.78 C 0.43 0.00 0.22 0000 --- --- --- --- 001440 00000 ------------ T 0.39 0.98 0.68 C 0.61 0.02 0.32 0000 --- --- --- --- 001613 00000 ------------ A 0.76 0.78 0.77 G 0.24 0.22 0.23 0000 --- --- --- --- 001968 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002015 00015 5' UTR C 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 002142 00142 5' UTR A 0.85 0.98 0.91 T 0.15 0.02 0.09 0000 --- --- --- --- 002319 00319 5' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002469 00469 5' UTR T 0.83 0.98 0.90 C 0.17 0.02 0.10 0000 --- --- --- --- 002692 00692 NON-SYN G 1.00 0.90 0.96 C 0.00 0.10 0.04 0065 AAG AAC LYS(K) ASN(N) 002887 00887 SYNON G 0.85 0.98 0.91 C 0.15 0.02 0.09 0130 CTG CTC LEU(L) LEU(L) 003068 01068 NON-SYN G 0.83 0.98 0.90 C 0.17 0.02 0.10 0191 GGC CGC GLY(G) ARG(R) 003169 01169 SYNON T 0.81 1.00 0.90 C 0.19 0.00 0.10 0224 CAT CAC HIS(H) HIS(H) 003296 01296 NON-SYN A 0.98 1.00 0.99 G 0.02 0.00 0.01 0267 AGC GGC SER(S) GLY(G) 003639 00000 ------------ G 1.00 0.90 0.96 A 0.00 0.10 0.04 0000 --- --- --- --- 003855 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004754 00000 ------------ G 0.85 0.98 0.91 A 0.15 0.02 0.09 0000 --- --- --- --- 005091 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005165 00000 ------------ G 0.33 0.78 0.55 C 0.67 0.22 0.45 0000 --- --- --- --- 005167 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005509 00000 ------------ G 0.60 0.98 0.79 A 0.40 0.02 0.21 0000 --- --- --- --- 005613 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 005617 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 005701 00000 ------------ C 0.81 1.00 0.90 G 0.19 0.00 0.10 0000 --- --- --- --- 005921 00000 ------------ C 0.75 0.80 0.77 T 0.25 0.20 0.23 0000 --- --- --- --- 006027 00000 ------------ T 0.77 1.00 0.88 G 0.23 0.00 0.12 0000 --- --- --- --- 006079 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 006091 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 006174 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006305 00000 ------------ T 0.33 0.79 0.53 C 0.67 0.21 0.47 0000 --- --- --- --- 006469 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006484 00000 ------------ G 0.62 0.98 0.80 T 0.38 0.02 0.20 0000 --- --- --- --- 006579 00000 ------------ A 0.35 0.76 0.55 G 0.65 0.24 0.45 0000 --- --- --- --- 006665 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 006685 00000 ------------ A 0.61 0.98 0.79 G 0.39 0.02 0.21 0000 --- --- --- --- 006771 00000 ------------ C 1.00 0.90 0.95 A 0.00 0.10 0.05 0000 --- --- --- --- 006812 00000 ------------ C 0.61 0.98 0.79 G 0.39 0.02 0.21 0000 --- --- --- --- 006894 00000 ------------ T 0.61 0.98 0.79 C 0.39 0.02 0.21 0000 --- --- --- --- 007024 00000 ------------ C 0.60 0.97 0.79 G 0.40 0.03 0.21 0000 --- --- --- --- 007249 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 007301 00000 ------------ C 0.87 0.80 0.83 T 0.13 0.20 0.17 0000 --- --- --- --- 007347 00000 ------------ C 0.74 0.80 0.77 A 0.26 0.20 0.23 0000 --- --- --- --- 007361 00000 ------------ A 0.37 0.77 0.57 G 0.63 0.23 0.43 0000 --- --- --- --- 007460 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007464 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 007498 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007668 00000 ------------ A 0.48 0.78 0.63 T 0.52 0.22 0.37 0000 --- --- --- --- 007969 00000 ------------ A 0.83 0.80 0.82 C 0.17 0.20 0.18 0000 --- --- --- --- 008008 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 008104 00000 ------------ - 0.52 0.22 0.37 + 0.48 0.78 0.63 0000 --- --- --- --- 008230 00000 ------------ T 0.48 0.78 0.63 C 0.52 0.22 0.37 0000 --- --- --- --- 008241 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008448 00000 ------------ G 0.48 0.78 0.63 A 0.52 0.22 0.37 0000 --- --- --- --- 008477 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 008617 00000 ------------ G 0.33 0.78 0.55 C 0.67 0.22 0.45 0000 --- --- --- --- 008698 00000 ------------ A 0.33 0.78 0.55 G 0.67 0.22 0.45 0000 --- --- --- --- 008711 00000 ------------ T 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 008766 00000 ------------ C 0.48 0.78 0.63 T 0.52 0.22 0.37 0000 --- --- --- --- 009027 01588 NON-SYN G 0.92 0.80 0.86 A 0.08 0.20 0.14 0364 CGC CAC ARG(R) HIS(H) 009055 01616 SYNON G 0.42 0.79 0.58 A 0.58 0.21 0.42 0373 TCG TCA SER(S) SER(S) 009220 01781 3' UTR C 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 009221 01782 3' UTR G 0.83 0.79 0.81 A 0.17 0.21 0.19 0000 --- --- --- --- 009272 01833 3' UTR G 0.48 0.79 0.62 A 0.52 0.21 0.38 0000 --- --- --- --- 009328 01889 3' UTR A 0.33 0.79 0.53 G 0.67 0.21 0.47 0000 --- --- --- --- 009333 01894 3' UTR G 0.48 0.79 0.62 A 0.52 0.21 0.38 0000 --- --- --- --- 009337 01898 3' UTR C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 009498 02059 3' UTR T 0.83 0.81 0.82 A 0.17 0.19 0.18 0000 --- --- --- --- 009680 02241 3' UTR - 0.52 0.78 0.65 + 0.48 0.22 0.35 0000 --- --- --- --- 009866 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009894 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009895 00000 ------------ - 0.33 0.78 0.55 + 0.67 0.22 0.45 0000 --- --- --- --- 010630 00000 ------------ A 0.88 1.00 0.93 G 0.12 0.00 0.07 0000 --- --- --- --- 010872 00000 ------------ A 0.71 0.89 0.79 T 0.29 0.11 0.21 0000 --- --- --- --- 011087 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 011208 00000 ------------ G 0.77 0.76 0.77 A 0.23 0.24 0.23 0000 --- --- --- --- 011266 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011280 00000 ------------ C 0.79 0.74 0.77 T 0.21 0.26 0.23 0000 --- --- --- --- 011487 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 006091: CCCCTGTCCCCG 006665: A 008104: T 009680: GTT 009895: AG Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000200 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 000409 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000605 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 000690 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000939 00000 ------------ G 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 001063 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001553 00000 ------------ G 0.95 0.52 0.73 T 0.05 0.48 0.27 0000 --- --- --- --- 001769 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001882 00000 ------------ C 0.93 0.70 0.82 T 0.07 0.30 0.18 0000 --- --- --- --- 002084 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 002149 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 002321 00000 ------------ - 0.09 0.00 0.04 + 0.91 1.00 0.96 0000 --- --- --- --- 002519 00000 ------------ A 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 002537 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 002843 00000 ------------ A 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 003072 00000 ------------ T 0.52 0.50 0.51 C 0.48 0.50 0.49 0000 --- --- --- --- 003112 00000 ------------ A 0.67 0.50 0.60 G 0.33 0.50 0.40 0000 --- --- --- --- 003260 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003325 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 003351 00000 ------------ A 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 003490 00000 ------------ A 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 003558 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 003847 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 003926 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 004056 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004273 00000 ------------ T 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 004504 00000 ------------ A 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 004517 00000 ------------ C 0.67 0.52 0.60 G 0.33 0.48 0.40 0000 --- --- --- --- 004640 00000 ------------ G 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- 004866 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005036 00000 ------------ - 0.93 0.70 0.82 + 0.07 0.30 0.18 0000 --- --- --- --- 005072 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005419 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 005582 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005818 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 005876 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006041 00290 5' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006854 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 006861 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006984 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007109 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 007162 00000 ------------ T 0.95 0.86 0.91 G 0.05 0.14 0.09 0000 --- --- --- --- 007165 00000 ------------ T 0.93 0.70 0.82 G 0.07 0.30 0.18 0000 --- --- --- --- 007182 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 007213 00000 ------------ T 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 007286 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 007296 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007316 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 007625 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 007967 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 008107 00000 ------------ G 0.70 0.80 0.75 A 0.30 0.20 0.25 0000 --- --- --- --- 008302 00000 ------------ G 0.93 0.87 0.90 A 0.07 0.13 0.10 0000 --- --- --- --- 008686 00000 ------------ G 0.98 0.76 0.88 C 0.02 0.24 0.12 0000 --- --- --- --- 009257 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 009301 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009548 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009595 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 009854 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 009992 00000 ------------ A 0.72 0.52 0.62 G 0.28 0.48 0.38 0000 --- --- --- --- 010160 00000 ------------ T 0.93 0.88 0.91 G 0.07 0.12 0.09 0000 --- --- --- --- 010588 00000 ------------ A 0.79 1.00 0.89 C 0.21 0.00 0.11 0000 --- --- --- --- 010637 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 010956 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011014 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011049 00000 ------------ G 0.72 0.80 0.76 A 0.28 0.20 0.24 0000 --- --- --- --- 011059 00000 ------------ A 1.00 0.91 0.96 C 0.00 0.09 0.04 0000 --- --- --- --- 011115 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 011201 00000 ------------ T 0.91 0.98 0.94 C 0.09 0.02 0.06 0000 --- --- --- --- 011241 00000 ------------ G 0.80 1.00 0.90 C 0.20 0.00 0.10 0000 --- --- --- --- 011445 00000 ------------ T 0.74 0.46 0.60 C 0.26 0.54 0.40 0000 --- --- --- --- 011461 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 011707 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011713 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012559 00000 ------------ - 0.29 0.20 0.24 + 0.71 0.80 0.76 0000 --- --- --- --- 012614 00000 ------------ C 0.70 0.80 0.75 T 0.30 0.20 0.25 0000 --- --- --- --- 013676 00000 ------------ G 0.71 0.80 0.76 A 0.29 0.20 0.24 0000 --- --- --- --- 013884 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 013948 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 014667 00000 ------------ C 1.00 0.86 0.93 T 0.00 0.14 0.07 0000 --- --- --- --- 014687 00000 ------------ A 0.91 0.70 0.81 G 0.09 0.30 0.19 0000 --- --- --- --- 014773 00000 ------------ G 0.95 0.98 0.97 T 0.05 0.02 0.03 0000 --- --- --- --- 014778 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 014904 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 014985 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 015096 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 015102 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015136 00000 ------------ C 0.93 0.88 0.91 A 0.07 0.12 0.09 0000 --- --- --- --- 015575 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015865 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 016119 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 016232 00000 ------------ G 0.73 0.80 0.77 A 0.27 0.20 0.23 0000 --- --- --- --- 016513 00000 ------------ A 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 016632 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 016990 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 017195 00000 ------------ T 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 017207 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017411 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 017674 00000 ------------ C 0.89 1.00 0.96 T 0.11 0.00 0.04 0000 --- --- --- --- 017682 00000 ------------ G 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 017860 00000 ------------ - 0.85 1.00 0.92 + 0.15 0.00 0.08 0000 --- --- --- --- 017927 00000 ------------ - 0.16 0.00 0.06 + 0.84 1.00 0.94 0000 --- --- --- --- 018184 00000 ------------ C 0.90 0.87 0.89 T 0.10 0.13 0.11 0000 --- --- --- --- 018235 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 018348 00000 ------------ C 0.71 0.80 0.76 A 0.29 0.20 0.24 0000 --- --- --- --- 018802 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 018956 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 019018 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 019459 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 019691 00000 ------------ A 0.73 0.81 0.77 G 0.27 0.19 0.23 0000 --- --- --- --- 020147 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 020175 00000 ------------ G 0.92 0.98 0.95 C 0.08 0.02 0.05 0000 --- --- --- --- 020288 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 020474 00372 5' UTR G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 020876 00774 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0126 GAC AAC ASP(D) ASN(N) 021801 01699 3' UTR G 0.44 0.80 0.62 A 0.56 0.20 0.38 0000 --- --- --- --- 021998 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 022142 01992 3' UTR C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 022625 02475 3' UTR G 0.74 0.80 0.77 A 0.26 0.20 0.23 0000 --- --- --- --- 022690 02540 3' UTR A 0.73 0.80 0.77 G 0.27 0.20 0.23 0000 --- --- --- --- 023115 02965 3' UTR - 0.12 0.00 0.05 + 0.88 1.00 0.95 0000 --- --- --- --- 023230 03080 3' UTR A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 023508 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 023526 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 023851 00000 ------------ A 0.92 0.97 0.95 G 0.08 0.03 0.05 0000 --- --- --- --- 023875 00000 ------------ C 0.76 0.84 0.80 A 0.24 0.16 0.20 0000 --- --- --- --- 023877 00000 ------------ C 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 023917 00000 ------------ T 0.63 0.83 0.73 C 0.37 0.17 0.27 0000 --- --- --- --- 024034 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 024849 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 025041 00000 ------------ T 0.77 0.80 0.79 C 0.23 0.20 0.21 0000 --- --- --- --- 025118 00000 ------------ C 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 025164 00000 ------------ C 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 025176 00000 ------------ C 0.82 1.00 0.91 T 0.18 0.00 0.09 0000 --- --- --- --- 025213 00000 ------------ T 0.96 0.70 0.83 G 0.04 0.30 0.17 0000 --- --- --- --- 025231 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002321: GCCGC 003847: CTTAT 005036: T 007182: TTTGA 007967: T 012559: T 017860: A 017927: TAAG 023115: CA 024849: TT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 003113 00000 ------------ C 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 003196 00000 ------------ A 0.62 0.77 0.69 T 0.38 0.23 0.31 0000 --- --- --- --- 003293 00000 ------------ C 0.88 0.65 0.78 A 0.12 0.35 0.22 0000 --- --- --- --- 003788 00000 ------------ C 0.93 1.00 0.96 G 0.07 0.00 0.04 0000 --- --- --- --- 003789 00000 ------------ - 0.95 1.00 0.98 + 0.05 0.00 0.02 0000 --- --- --- --- 003815 00000 ------------ C 0.95 0.76 0.85 T 0.05 0.24 0.15 0000 --- --- --- --- 003915 00000 ------------ - 0.80 1.00 0.90 + 0.20 0.00 0.10 0000 --- --- --- --- 004179 00196 SYNON G 0.72 0.93 0.83 A 0.28 0.07 0.17 0039 CAG CAA GLN(Q) GLN(Q) 004820 00837 NON-SYN C 1.00 0.98 0.99 G 0.00 0.02 0.01 0253 ACC AGC THR(T) SER(S) 006505 00000 ------------ A 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 007178 00000 ------------ A 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 007741 00000 ------------ - 0.17 0.00 0.09 + 0.83 1.00 0.91 0000 --- --- --- --- 007830 00000 ------------ G 0.71 0.30 0.51 A 0.29 0.70 0.49 0000 --- --- --- --- 008415 00000 ------------ A 0.50 0.70 0.60 G 0.50 0.30 0.40 0000 --- --- --- --- 009489 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009522 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009778 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 010054 00000 ------------ A 0.96 0.65 0.81 G 0.04 0.35 0.19 0000 --- --- --- --- 010090 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 003789: GGGC 003915: CGGGCGG 007741: CT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000138 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 000200 00000 ------------ C 0.93 0.86 0.90 T 0.07 0.14 0.10 0000 --- --- --- --- 000527 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000554 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000710 00000 ------------ C 0.94 0.83 0.88 T 0.06 0.17 0.12 0000 --- --- --- --- 000874 00000 ------------ G 0.85 0.78 0.82 A 0.15 0.22 0.18 0000 --- --- --- --- 001467 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001634 00000 ------------ C 0.68 0.59 0.63 A 0.32 0.41 0.37 0000 --- --- --- --- 001673 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 001771 -----** NON-SYN C 0.93 0.83 0.88 T 0.07 0.17 0.12 0014 CGT TGT ARG(R) CYS(C) 001840 00000 ------------ G 0.93 0.96 0.94 A 0.07 0.04 0.06 0000 --- --- --- --- 002082 00000 ------------ G 0.54 0.65 0.60 A 0.46 0.35 0.40 0000 --- --- --- --- 002648 00000 ------------ G 0.86 0.76 0.81 C 0.14 0.24 0.19 0000 --- --- --- --- 002839 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003015 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003239 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003303 00000 ------------ C 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 003348 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 003396 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 003414 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003439 00000 ------------ C 0.85 0.80 0.83 G 0.15 0.20 0.17 0000 --- --- --- --- 003460 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 003511 00000 ------------ G 0.94 0.96 0.95 A 0.06 0.04 0.05 0000 --- --- --- --- 003875 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 003981 00000 ------------ A 0.79 0.65 0.72 T 0.21 0.35 0.28 0000 --- --- --- --- 003985 00000 ------------ G 0.96 0.85 0.90 T 0.04 0.15 0.10 0000 --- --- --- --- 004251 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 004363 00000 ------------ G 0.85 0.91 0.88 A 0.15 0.09 0.12 0000 --- --- --- --- 004462 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 004514 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 004691 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 004805 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 006013 -----** NON-SYN G 0.96 1.00 0.98 A 0.04 0.00 0.02 0354 GGG GAG GLY(G) GLU(E) 006510 -----** 3' UTR T 0.88 0.98 0.92 C 0.12 0.02 0.08 0000 --- --- --- --- 006830 -----** 3' UTR G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 006954 -----** 3' UTR C 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 007003 -----** 3' UTR G 0.92 0.96 0.94 A 0.08 0.04 0.06 0000 --- --- --- --- 007009 -----** 3' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 007069 -----** 3' UTR A 0.79 0.74 0.77 T 0.21 0.26 0.23 0000 --- --- --- --- 007119 -----** 3' UTR G 0.92 0.96 0.94 T 0.08 0.04 0.06 0000 --- --- --- --- 007135 -----** 3' UTR G 0.92 0.96 0.94 A 0.08 0.04 0.06 0000 --- --- --- --- 007252 -----** 3' UTR G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 008993 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 009406 00000 ------------ C 0.85 0.80 0.83 T 0.15 0.20 0.17 0000 --- --- --- --- 009468 00000 ------------ G 0.92 0.98 0.94 A 0.08 0.02 0.06 0000 --- --- --- --- 009612 00000 ------------ G 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 009644 00000 ------------ G 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 009737 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 009856 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 009888 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 009966 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 010179 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 010632 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010922 00000 ------------ G 0.85 0.91 0.88 T 0.15 0.09 0.12 0000 --- --- --- --- 011075 00000 ------------ C 0.93 0.89 0.91 T 0.07 0.11 0.09 0000 --- --- --- --- 011327 00000 ------------ C 1.00 0.94 0.97 T 0.00 0.06 0.03 0000 --- --- --- --- 011353 00000 ------------ G 0.76 0.69 0.73 T 0.24 0.31 0.27 0000 --- --- --- --- 011502 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 011885 00000 ------------ + 0.95 1.00 0.98 - 0.05 0.00 0.02 0000 --- --- --- --- 011970 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 012161 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012257 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012574 00000 ------------ T 0.85 0.91 0.88 C 0.15 0.09 0.12 0000 --- --- --- --- 012714 00000 ------------ C 0.92 0.87 0.89 T 0.08 0.13 0.11 0000 --- --- --- --- 012813 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 013258 00000 ------------ G 0.81 0.66 0.74 A 0.19 0.34 0.26 0000 --- --- --- --- 013795 00000 ------------ G 0.92 0.82 0.87 A 0.08 0.18 0.13 0000 --- --- --- --- 014211 00000 ------------ + 0.98 1.00 0.99 - 0.02 0.00 0.01 0000 --- --- --- --- 014271 00000 ------------ G 0.89 0.79 0.84 C 0.11 0.21 0.16 0000 --- --- --- --- 014305 00000 ------------ T 0.88 0.91 0.89 C 0.12 0.09 0.11 0000 --- --- --- --- 014447 00000 ------------ T 0.89 0.80 0.84 C 0.11 0.20 0.16 0000 --- --- --- --- 014466 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014548 00000 ------------ T 0.96 0.82 0.89 C 0.04 0.18 0.11 0000 --- --- --- --- 014722 00000 ------------ G 0.92 0.87 0.89 A 0.08 0.13 0.11 0000 --- --- --- --- 014794 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 014981 00000 ------------ C 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 015030 00000 ------------ T 0.88 0.80 0.84 C 0.12 0.20 0.16 0000 --- --- --- --- ** Sites are not mapped to the complete CDNA. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 011885: A 014211: CTC Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000480 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 000697 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 001646 00155 NON-SYN T 1.00 0.93 0.97 A 0.00 0.07 0.03 0009 CTC CAC LEU(L) HIS(H) 001801 00223 NON-SYN C 0.83 0.93 0.87 T 0.17 0.07 0.13 0032 CGG TGG ARG(R) TRP(W) 001802 00224 NON-SYN G 0.73 0.89 0.79 A 0.27 0.11 0.21 0032 CGG CAG ARG(R) GLN(Q) 002291 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002512 00534 SYNON C 0.96 1.00 0.98 T 0.04 0.00 0.02 0135 TAC TAT TYR(Y) TYR(Y) 002557 00579 SYNON G 0.93 0.85 0.89 A 0.07 0.15 0.11 0150 CGG CGA ARG(R) ARG(R) 002766 00633 SYNON G 1.00 0.91 0.96 A 0.00 0.09 0.04 0168 CCG CCA PRO(P) PRO(P) 003154 00801 SYNON C 1.00 0.96 0.98 T 0.00 0.04 0.02 0224 TAC TAT TYR(Y) TYR(Y) 003236 00883 NON-SYN G 0.98 0.96 0.97 A 0.02 0.04 0.03 0252 GGC AGC GLY(G) SER(S) 003568 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 003684 00000 ------------ A 0.96 0.95 0.95 G 0.04 0.05 0.05 0000 --- --- --- --- 004022 00000 ------------ G 0.73 0.71 0.72 A 0.27 0.29 0.28 0000 --- --- --- --- 004115 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 004538 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004573 00000 ------------ T 0.73 0.89 0.81 C 0.27 0.11 0.19 0000 --- --- --- --- 004607 00000 ------------ T 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 004913 01494 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0455 GTC GTT VAL(V) VAL(V) 004963 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005162 00000 ------------ T 0.96 0.63 0.80 C 0.04 0.37 0.20 0000 --- --- --- --- 005180 00000 ------------ - 0.73 0.89 0.81 + 0.27 0.11 0.19 0000 --- --- --- --- 006088 01822 NON-SYN A 0.98 1.00 0.99 G 0.02 0.00 0.01 0565 AAA GAA LYS(K) GLU(E) 006484 00000 ------------ A 0.90 0.89 0.89 G 0.10 0.11 0.11 0000 --- --- --- --- 006527 00000 ------------ C 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 006642 02082 NON-SYN T 0.98 1.00 0.99 G 0.02 0.00 0.01 0651 GAT GAG ASP(D) GLU(E) 006943 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007202 00000 ------------ G 0.46 0.65 0.55 A 0.54 0.35 0.45 0000 --- --- --- --- 007454 02447 3' UTR C 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 007541 00000 ------------ T 0.74 0.88 0.80 C 0.26 0.12 0.20 0000 --- --- --- --- 007580 00000 ------------ T 0.74 0.90 0.81 C 0.26 0.10 0.19 0000 --- --- --- --- 008221 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008311 00000 ------------ C 0.71 0.89 0.80 T 0.29 0.11 0.20 0000 --- --- --- --- 008497 00000 ------------ C 0.75 0.93 0.84 T 0.25 0.07 0.16 0000 --- --- --- --- 008690 00000 ------------ - 0.12 0.05 0.09 + 0.88 0.95 0.91 0000 --- --- --- --- 009099 00000 ------------ G 0.96 0.61 0.79 A 0.04 0.39 0.21 0000 --- --- --- --- 009110 00000 ------------ G 0.00 0.02 0.01 A 1.00 0.98 0.99 0000 --- --- --- --- 009878 00000 ------------ C 0.85 0.75 0.80 A 0.15 0.25 0.20 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004115: TGA 005180: AT 008690: G Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000313 00000 ------------ T 0.75 0.48 0.62 C 0.25 0.52 0.38 0000 --- --- --- --- 000327 00000 ------------ G 0.50 0.50 0.50 A 0.50 0.50 0.50 0000 --- --- --- --- 001592 00000 ------------ - 0.93 1.00 0.97 + 0.07 0.00 0.03 0000 --- --- --- --- 003574 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 003682 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 003923 00000 ------------ T 0.85 0.77 0.82 C 0.15 0.23 0.18 0000 --- --- --- --- 004458 00099 SYNON T 1.00 0.98 0.99 C 0.00 0.02 0.01 0027 GGT GGC GLY(G) GLY(G) 005029 00299 NON-SYN G 0.92 1.00 0.96 A 0.08 0.00 0.04 0094 CGG CAG ARG(R) GLN(Q) 005355 00000 ------------ A 0.76 0.74 0.75 G 0.24 0.26 0.25 0000 --- --- --- --- 006019 00000 ------------ C 0.87 0.86 0.87 T 0.13 0.14 0.13 0000 --- --- --- --- 007644 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 007660 00000 ------------ G 0.79 0.71 0.75 A 0.21 0.29 0.25 0000 --- --- --- --- 009056 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009257 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009351 00000 ------------ G 1.00 0.82 0.93 C 0.00 0.18 0.07 0000 --- --- --- --- 009369 00000 ------------ C 0.93 1.00 0.96 G 0.07 0.00 0.04 0000 --- --- --- --- 009499 00000 ------------ C 0.91 0.82 0.88 T 0.09 0.18 0.12 0000 --- --- --- --- 009854 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 009953 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001592: C 009854: TGGTGGGTGCTCCTAAGC Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000781 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 000784 00000 ------------ T 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 000839 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000855 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000875 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 000989 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000991 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001367 00000 ------------ G 1.00 0.94 0.97 A 0.00 0.06 0.03 0000 --- --- --- --- 001454 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 001482 00000 ------------ G 0.87 0.95 0.91 T 0.13 0.05 0.09 0000 --- --- --- --- 001711 00000 ------------ G 0.83 1.00 0.90 A 0.17 0.00 0.10 0000 --- --- --- --- 001773 00000 ------------ C 0.96 1.00 0.97 G 0.04 0.00 0.03 0000 --- --- --- --- 001797 00000 ------------ G 0.42 0.67 0.51 C 0.58 0.33 0.49 0000 --- --- --- --- 001825 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001966 00000 ------------ - 0.00 0.03 0.01 + 1.00 0.97 0.99 0000 --- --- --- --- 002064 00048 5' UTR - 0.04 0.00 0.03 + 0.96 1.00 0.97 0000 --- --- --- --- 002076 00060 5' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002291 00000 ------------ G 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 002340 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002358 00000 ------------ T 0.89 0.98 0.93 C 0.11 0.02 0.07 0000 --- --- --- --- 002423 00000 ------------ - 0.11 0.02 0.07 + 0.89 0.98 0.93 0000 --- --- --- --- 002468 00000 ------------ G 0.82 1.00 0.91 A 0.18 0.00 0.09 0000 --- --- --- --- 002478 00000 ------------ G 0.95 0.95 0.95 C 0.05 0.05 0.05 0000 --- --- --- --- 002549 00000 ------------ - 0.89 0.98 0.93 + 0.11 0.02 0.07 0000 --- --- --- --- 002574 00000 ------------ - 0.22 0.04 0.13 + 0.78 0.96 0.87 0000 --- --- --- --- 002710 00000 ------------ T 0.88 0.98 0.93 C 0.12 0.02 0.07 0000 --- --- --- --- 002992 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 003203 00000 ------------ C 0.74 1.00 0.87 G 0.26 0.00 0.13 0000 --- --- --- --- 003218 00000 ------------ - 0.12 0.02 0.08 + 0.88 0.98 0.92 0000 --- --- --- --- 004360 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 004432 00000 ------------ C 0.88 0.98 0.93 T 0.12 0.02 0.07 0000 --- --- --- --- 004478 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 004588 00000 ------------ G 0.88 0.98 0.93 C 0.12 0.02 0.07 0000 --- --- --- --- 004664 00000 ------------ G 0.88 0.98 0.93 A 0.12 0.02 0.07 0000 --- --- --- --- 004760 00000 ------------ G 0.82 0.93 0.88 A 0.18 0.07 0.12 0000 --- --- --- --- 004950 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 005179 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005203 00000 ------------ - 0.11 0.02 0.07 + 0.89 0.98 0.93 0000 --- --- --- --- 005259 00000 ------------ T 1.00 0.89 0.94 C 0.00 0.11 0.06 0000 --- --- --- --- 005310 00000 ------------ G 0.89 0.98 0.93 T 0.11 0.02 0.07 0000 --- --- --- --- 005391 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005403 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 005426 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 005447 00000 ------------ C 0.68 0.89 0.79 T 0.32 0.11 0.21 0000 --- --- --- --- 005469 00000 ------------ C 0.89 0.98 0.93 T 0.11 0.02 0.07 0000 --- --- --- --- 005882 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006180 00000 ------------ C 1.00 0.43 0.70 T 0.00 0.57 0.30 0000 --- --- --- --- 006221 00000 ------------ G 1.00 0.35 0.65 A 0.00 0.65 0.35 0000 --- --- --- --- 006265 00000 ------------ A 0.82 0.90 0.86 G 0.18 0.10 0.14 0000 --- --- --- --- 006268 00000 ------------ G 0.84 1.00 0.92 A 0.16 0.00 0.08 0000 --- --- --- --- 006276 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 006469 00000 ------------ - 0.78 0.24 0.49 + 0.23 0.76 0.51 0000 --- --- --- --- 007101 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007169 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 007170 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 007265 00000 ------------ T 0.88 0.98 0.92 C 0.12 0.02 0.08 0000 --- --- --- --- 008173 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 008231 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 008265 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008291 00000 ------------ C 0.91 0.33 0.62 T 0.09 0.67 0.38 0000 --- --- --- --- 008300 00000 ------------ G 1.00 0.43 0.72 A 0.00 0.57 0.28 0000 --- --- --- --- 008482 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008516 00000 ------------ A 1.00 0.35 0.67 G 0.00 0.65 0.33 0000 --- --- --- --- 008541 00000 ------------ C 0.61 0.78 0.70 T 0.39 0.22 0.30 0000 --- --- --- --- 008663 00000 ------------ T 0.89 0.98 0.93 C 0.11 0.02 0.07 0000 --- --- --- --- 008756 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 008761 00000 ------------ - 0.12 0.02 0.07 + 0.88 0.98 0.93 0000 --- --- --- --- 008857 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008938 00000 ------------ G 0.88 0.96 0.91 C 0.12 0.04 0.09 0000 --- --- --- --- 008956 00000 ------------ G 0.88 0.98 0.93 A 0.12 0.02 0.07 0000 --- --- --- --- 009133 00641 SYNON C 0.88 1.00 0.93 T 0.12 0.00 0.07 0181 GAC GAT ASP(D) ASP(D) 009205 00000 ------------ C 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 009219 00000 ------------ C 0.88 1.00 0.93 T 0.12 0.00 0.07 0000 --- --- --- --- 009413 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009518 00000 ------------ C 0.88 0.98 0.93 A 0.12 0.02 0.07 0000 --- --- --- --- 009660 00000 ------------ G 1.00 0.35 0.68 A 0.00 0.65 0.32 0000 --- --- --- --- 009670 00000 ------------ - 1.00 0.43 0.72 + 0.00 0.57 0.28 0000 --- --- --- --- 009774 00000 ------------ G 0.58 0.78 0.68 C 0.42 0.22 0.32 0000 --- --- --- --- 009839 00000 ------------ G 0.58 0.78 0.68 A 0.42 0.22 0.32 0000 --- --- --- --- 009855 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 009894 00680 SYNON C 0.88 0.98 0.93 G 0.12 0.02 0.07 0194 TCC TCG SER(S) SER(S) 010081 00000 ------------ C 0.88 0.98 0.93 T 0.12 0.02 0.07 0000 --- --- --- --- 010171 00773 SYNON T 0.58 0.78 0.68 C 0.42 0.22 0.32 0225 GCT GCC ALA(A) ALA(A) 010299 00000 ------------ C 0.88 0.33 0.61 A 0.12 0.67 0.39 0000 --- --- --- --- 010316 00000 ------------ C 1.00 0.43 0.72 T 0.00 0.57 0.28 0000 --- --- --- --- 010317 00000 ------------ G 0.60 0.78 0.69 A 0.40 0.22 0.31 0000 --- --- --- --- 010328 00000 ------------ T 0.83 0.93 0.88 G 0.17 0.07 0.12 0000 --- --- --- --- 010343 00000 ------------ A 0.88 0.93 0.90 G 0.12 0.07 0.10 0000 --- --- --- --- 010347 00000 ------------ C 0.88 0.98 0.93 T 0.12 0.02 0.07 0000 --- --- --- --- 010376 00000 ------------ A 0.89 0.96 0.92 C 0.11 0.04 0.08 0000 --- --- --- --- 010393 00000 ------------ C 0.61 0.78 0.70 G 0.39 0.22 0.30 0000 --- --- --- --- 010422 00000 ------------ A 0.45 0.77 0.62 C 0.55 0.23 0.38 0000 --- --- --- --- 011130 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011139 00000 ------------ G 0.62 0.98 0.79 A 0.38 0.02 0.21 0000 --- --- --- --- 011289 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011321 00000 ------------ C 0.58 0.84 0.71 T 0.42 0.16 0.29 0000 --- --- --- --- 011426 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011450 00000 ------------ C 0.88 0.98 0.93 T 0.12 0.02 0.07 0000 --- --- --- --- 011462 00000 ------------ C 0.88 0.98 0.93 T 0.12 0.02 0.07 0000 --- --- --- --- 011480 00000 ------------ C 0.88 0.98 0.93 T 0.12 0.02 0.07 0000 --- --- --- --- 011583 00000 ------------ A 0.75 1.00 0.87 G 0.25 0.00 0.13 0000 --- --- --- --- 011598 00000 ------------ C 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 011759 00000 ------------ C 1.00 0.68 0.85 T 0.00 0.32 0.15 0000 --- --- --- --- 011973 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 011974 00000 ------------ G 1.00 0.34 0.68 A 0.00 0.66 0.32 0000 --- --- --- --- 012011 00000 ------------ G 0.56 0.78 0.67 A 0.44 0.22 0.33 0000 --- --- --- --- 012199 00000 ------------ C 0.58 0.80 0.69 T 0.42 0.20 0.31 0000 --- --- --- --- 012281 01287 3' UTR G 1.00 0.43 0.72 A 0.00 0.57 0.28 0000 --- --- --- --- 012433 01439 3' UTR T 0.44 0.78 0.61 A 0.56 0.22 0.39 0000 --- --- --- --- 012774 01780 3' UTR G 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 012924 01930 3' UTR T 0.88 0.98 0.93 C 0.12 0.02 0.07 0000 --- --- --- --- 012956 01962 3' UTR C 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 012966 01972 3' UTR G 0.88 0.98 0.93 A 0.12 0.02 0.07 0000 --- --- --- --- 013106 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013168 00000 ------------ A 0.87 0.98 0.92 G 0.13 0.02 0.08 0000 --- --- --- --- 013204 00000 ------------ G 0.87 0.98 0.92 A 0.13 0.02 0.08 0000 --- --- --- --- 013217 00000 ------------ G 0.87 0.98 0.92 A 0.13 0.02 0.08 0000 --- --- --- --- 013233 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 013250 00000 ------------ A 0.83 0.98 0.90 G 0.17 0.02 0.10 0000 --- --- --- --- 013266 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 013318 00000 ------------ C 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000781: CCTTCGCGTTCGGC 001966: G 002064: GGC 002423: GAGCCCGGCCTC 002549: TTCCCGGCGGAGGTTGAGGATCTCG 002574: GA 003218: G 004360: ATAG 005203: G 006469: GT 008761: GTGCCTTCCCGAAGGGG 009670: A 011973: GG 013233: AG Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000152 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 000315 00000 ------------ A 0.90 0.87 0.88 T 0.10 0.13 0.12 0000 --- --- --- --- 000501 00000 ------------ G 0.88 0.43 0.66 A 0.12 0.57 0.34 0000 --- --- --- --- 000554 00000 ------------ T 0.88 0.43 0.66 C 0.12 0.57 0.34 0000 --- --- --- --- 000704 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 000786 00000 ------------ T 0.88 0.43 0.66 G 0.12 0.57 0.34 0000 --- --- --- --- 000809 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000951 00000 ------------ G 0.96 0.87 0.91 A 0.04 0.13 0.09 0000 --- --- --- --- 001180 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 001269 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 001355 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001372 00000 ------------ A 0.90 0.86 0.88 G 0.10 0.14 0.12 0000 --- --- --- --- 001493 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001588 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001701 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 001852 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001866 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 002077 00077 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0023 GAG AAG GLU(E) LYS(K) 002232 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002463 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002487 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002629 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002848 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002859 00000 ------------ A 0.91 0.45 0.68 G 0.09 0.55 0.32 0000 --- --- --- --- 002904 00000 ------------ C 0.98 0.93 0.95 T 0.02 0.07 0.05 0000 --- --- --- --- 002908 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 002982 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003339 00286 SYNON G 0.81 0.46 0.64 A 0.19 0.54 0.36 0092 GGG GGA GLY(G) GLY(G) 003872 00819 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004128 00000 ------------ T 0.50 0.67 0.59 G 0.50 0.33 0.41 0000 --- --- --- --- 004163 00000 ------------ T 0.98 0.96 0.97 C 0.02 0.04 0.03 0000 --- --- --- --- 004319 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004391 00000 ------------ G 0.69 0.87 0.78 A 0.31 0.13 0.22 0000 --- --- --- --- 004510 00000 ------------ C 0.50 0.67 0.59 G 0.50 0.33 0.41 0000 --- --- --- --- 004833 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004982 00000 ------------ G 0.82 0.46 0.63 A 0.18 0.54 0.37 0000 --- --- --- --- 005023 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005296 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 005397 00000 ------------ G 0.47 0.64 0.55 A 0.53 0.36 0.45 0000 --- --- --- --- 005614 00000 ------------ G 0.45 0.65 0.56 A 0.55 0.35 0.44 0000 --- --- --- --- 005716 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 005780 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001269: C Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000389 00000 ------------ G 0.56 0.52 0.54 A 0.44 0.48 0.46 0000 --- --- --- --- 000744 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000800 00000 ------------ C 0.95 0.80 0.87 T 0.05 0.20 0.13 0000 --- --- --- --- 001071 00000 ------------ A 0.86 0.61 0.73 G 0.14 0.39 0.27 0000 --- --- --- --- 001263 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001514 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001537 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 001661 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002064 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 002418 00000 ------------ C 0.59 0.85 0.72 G 0.41 0.15 0.28 0000 --- --- --- --- 002557 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003212 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003664 00000 ------------ G 0.88 1.00 0.93 A 0.12 0.00 0.07 0000 --- --- --- --- 003668 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003743 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 003969 00000 ------------ - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 003988 00000 ------------ G 0.96 0.89 0.92 A 0.04 0.11 0.08 0000 --- --- --- --- 004072 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004196 00000 ------------ T 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 004235 00000 ------------ - 0.95 0.90 0.93 + 0.05 0.10 0.07 0000 --- --- --- --- 004734 00000 ------------ A 0.97 0.88 0.92 G 0.03 0.12 0.08 0000 --- --- --- --- 005122 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005650 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005746 00000 ------------ T 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 005859 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007769 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 007818 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 007830 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 008220 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 008515 00877 FRAME SHIFT - 0.00 0.02 0.01 + 1.00 0.98 0.99 0281 --- GTG --- --- 008736 00000 ------------ C 0.97 0.90 0.94 G 0.03 0.10 0.06 0000 --- --- --- --- 008824 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009092 00000 ------------ A 0.96 0.89 0.92 G 0.04 0.11 0.08 0000 --- --- --- --- 009204 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 009245 00000 ------------ - 0.00 0.05 0.03 + 1.00 0.95 0.97 0000 --- --- --- --- 010248 00990 NON-SYN G 1.00 0.91 0.95 C 0.00 0.09 0.05 0318 GAG GAC GLU(E) ASP(D) 010375 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 011177 00000 ------------ - 0.21 0.12 0.17 + 0.79 0.88 0.83 0000 --- --- --- --- 011574 01059 SYNON G 0.76 0.91 0.84 A 0.24 0.09 0.16 0341 GCG GCA ALA(A) ALA(A) 011772 00000 ------------ G 0.76 0.89 0.83 T 0.24 0.11 0.17 0000 --- --- --- --- 011966 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 013589 00000 ------------ T 0.75 0.89 0.82 C 0.25 0.11 0.18 0000 --- --- --- --- 013610 00000 ------------ C 0.68 0.89 0.78 T 0.32 0.11 0.22 0000 --- --- --- --- 013781 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013807 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014279 00000 ------------ G 0.73 0.54 0.63 A 0.27 0.46 0.37 0000 --- --- --- --- 014408 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014666 00000 ------------ C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 014912 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015203 00000 ------------ T 0.73 0.89 0.81 C 0.27 0.11 0.19 0000 --- --- --- --- 015516 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 015574 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015782 00000 ------------ G 1.00 0.91 0.95 A 0.00 0.09 0.05 0000 --- --- --- --- 016383 00000 ------------ A 0.90 0.89 0.89 G 0.10 0.11 0.11 0000 --- --- --- --- 016604 00000 ------------ G 0.73 0.89 0.81 A 0.27 0.11 0.19 0000 --- --- --- --- 016898 00000 ------------ G 0.95 0.93 0.94 T 0.05 0.07 0.06 0000 --- --- --- --- 017371 00000 ------------ G 0.73 0.89 0.81 A 0.27 0.11 0.19 0000 --- --- --- --- 017380 00000 ------------ G 0.73 0.89 0.81 T 0.27 0.11 0.19 0000 --- --- --- --- 018451 00000 ------------ G 0.97 0.93 0.95 C 0.03 0.07 0.05 0000 --- --- --- --- 018625 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 019300 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 019517 02236 NON-SYN C 0.93 1.00 0.96 T 0.07 0.00 0.04 0734 CGC TGC ARG(R) CYS(C) 020466 00000 ------------ T 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 020621 00000 ------------ C 0.83 0.91 0.87 T 0.17 0.09 0.13 0000 --- --- --- --- 020622 00000 ------------ G 0.73 0.89 0.81 A 0.27 0.11 0.19 0000 --- --- --- --- 021111 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 021332 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021377 00000 ------------ G 0.93 0.85 0.89 A 0.07 0.15 0.11 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 003969: GCCTCGGT 004235: AACC 008515: GTGGACAGGGTCAGGAATCAGGAGTCTG 009245: A 011177: GTA Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000834 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 000836 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 000963 00000 ------------ T 0.96 0.45 0.71 G 0.04 0.55 0.29 0000 --- --- --- --- 001014 00000 ------------ G 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 001883 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001975 00033 5' UTR C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 002190 00000 ------------ G 0.81 1.00 0.91 T 0.19 0.00 0.09 0000 --- --- --- --- 002278 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002302 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 002313 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002422 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002526 00000 ------------ T 0.68 0.61 0.64 G 0.33 0.39 0.36 0000 --- --- --- --- 002527 00000 ------------ G 0.68 0.61 0.64 T 0.33 0.39 0.36 0000 --- --- --- --- 002528 00000 ------------ A 0.68 0.60 0.64 G 0.33 0.40 0.36 0000 --- --- --- --- 002599 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002933 00000 ------------ - 0.38 0.16 0.28 + 0.62 0.84 0.72 0000 --- --- --- --- 002937 00000 ------------ T 0.62 0.85 0.73 C 0.38 0.15 0.27 0000 --- --- --- --- 002945 00000 ------------ G 0.90 1.00 0.94 C 0.10 0.00 0.06 0000 --- --- --- --- 002976 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 003413 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003646 00000 ------------ - 0.72 1.00 0.86 + 0.28 0.00 0.14 0000 --- --- --- --- 003727 00000 ------------ T 0.93 0.80 0.87 C 0.07 0.20 0.13 0000 --- --- --- --- 003739 00000 ------------ G 0.82 1.00 0.91 A 0.18 0.00 0.09 0000 --- --- --- --- 004121 00000 ------------ A 0.79 0.71 0.76 G 0.21 0.29 0.24 0000 --- --- --- --- 004268 00364 NON-SYN C 0.93 0.79 0.87 G 0.07 0.21 0.13 0102 CGC GGC ARG(R) GLY(G) 004453 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 004577 00000 ------------ A 0.98 0.78 0.88 C 0.02 0.22 0.12 0000 --- --- --- --- 004613 00000 ------------ G 0.77 0.93 0.85 A 0.23 0.07 0.15 0000 --- --- --- --- 004721 00000 ------------ G 0.96 0.91 0.93 A 0.04 0.09 0.07 0000 --- --- --- --- 005815 00000 ------------ - 0.02 0.11 0.06 + 0.98 0.89 0.94 0000 --- --- --- --- 006366 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 006379 00000 ------------ C 0.96 0.73 0.84 T 0.04 0.27 0.16 0000 --- --- --- --- 006462 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 006572 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 007048 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 007071 00000 ------------ - 0.05 0.00 0.03 + 0.95 1.00 0.97 0000 --- --- --- --- 007446 00000 ------------ C 0.83 0.93 0.88 A 0.17 0.07 0.12 0000 --- --- --- --- 007464 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 008623 00801 SYNON C 1.00 0.95 0.98 T 0.00 0.05 0.02 0247 AAC AAT ASN(N) ASN(N) 008870 00000 ------------ G 1.00 0.86 0.93 A 0.00 0.14 0.07 0000 --- --- --- --- 008873 00000 ------------ T 1.00 0.86 0.93 A 0.00 0.14 0.07 0000 --- --- --- --- 009147 00843 SYNON C 0.96 1.00 0.98 T 0.04 0.00 0.02 0261 TAC TAT TYR(Y) TYR(Y) 009259 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009367 00972 SYNON G 0.80 0.89 0.85 A 0.20 0.11 0.15 0304 CGG CGA ARG(R) ARG(R) 009396 01001 NON-SYN C 1.00 0.76 0.88 T 0.00 0.24 0.12 0314 CCC CTC PRO(P) LEU(L) 009483 00000 ------------ C 0.92 0.76 0.83 G 0.08 0.24 0.17 0000 --- --- --- --- 010700 00000 ------------ C 0.67 0.72 0.69 T 0.33 0.28 0.31 0000 --- --- --- --- 010940 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010969 00000 ------------ A 0.76 0.85 0.80 T 0.24 0.15 0.20 0000 --- --- --- --- 011164 00000 ------------ G 1.00 0.87 0.94 A 0.00 0.13 0.06 0000 --- --- --- --- 011588 01467 NON-SYN G 0.96 1.00 0.98 C 0.04 0.00 0.02 0469 GAG GAC GLU(E) ASP(D) 011710 00000 ------------ C 0.84 1.00 0.91 T 0.16 0.00 0.09 0000 --- --- --- --- 011876 01614 SYNON C 0.98 0.86 0.93 A 0.02 0.14 0.07 0518 CCC CCA PRO(P) PRO(P) 011975 01713 SYNON G 0.96 1.00 0.98 T 0.04 0.00 0.02 0551 GTG GTT VAL(V) VAL(V) 012954 01896 SYNON G 0.80 0.96 0.88 A 0.20 0.04 0.12 0612 ACG ACA THR(T) THR(T) 013199 00000 ------------ - 0.70 0.85 0.77 + 0.30 0.15 0.23 0000 --- --- --- --- 013407 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 013454 00000 ------------ G 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 013563 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 013573 00000 ------------ C 0.79 0.96 0.87 A 0.21 0.04 0.13 0000 --- --- --- --- 013588 00000 ------------ G 0.98 0.85 0.91 A 0.02 0.15 0.09 0000 --- --- --- --- 013612 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013842 00000 ------------ G 0.46 0.70 0.57 T 0.54 0.30 0.43 0000 --- --- --- --- 014342 00000 ------------ C 0.74 0.74 0.74 T 0.26 0.26 0.26 0000 --- --- --- --- 014989 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 014991 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 015095 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 015590 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015740 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 015834 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 015845 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016182 00000 ------------ C 0.94 0.81 0.89 A 0.06 0.19 0.11 0000 --- --- --- --- 016337 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 016364 00000 ------------ G 0.89 0.75 0.83 A 0.11 0.25 0.17 0000 --- --- --- --- 016366 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 017549 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 017992 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 018377 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 018470 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 018620 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018819 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 019008 00000 ------------ T 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 019295 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 019473 00000 ------------ - 0.00 0.07 0.04 + 1.00 0.93 0.96 0000 --- --- --- --- 019590 00000 ------------ T 0.88 0.71 0.80 C 0.12 0.29 0.20 0000 --- --- --- --- 019889 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 019890 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 019910 00000 ------------ T 0.97 0.98 0.97 C 0.03 0.02 0.03 0000 --- --- --- --- 020064 00000 ------------ T 0.87 0.73 0.79 C 0.13 0.27 0.21 0000 --- --- --- --- 020207 00000 ------------ C 0.87 0.95 0.91 G 0.13 0.05 0.09 0000 --- --- --- --- 020416 00000 ------------ G 0.80 0.64 0.72 A 0.20 0.36 0.28 0000 --- --- --- --- 020505 02481 SYNON C 0.75 0.64 0.70 G 0.25 0.36 0.30 0807 GTC GTG VAL(V) VAL(V) 020514 02490 SYNON G 0.93 1.00 0.96 A 0.07 0.00 0.04 0810 TCG TCA SER(S) SER(S) 020620 00000 ------------ C 0.78 0.63 0.70 T 0.23 0.37 0.30 0000 --- --- --- --- 020640 00000 ------------ G 0.78 0.63 0.70 C 0.23 0.37 0.30 0000 --- --- --- --- 020772 00000 ------------ G 0.75 0.63 0.69 T 0.25 0.37 0.31 0000 --- --- --- --- 020824 00000 ------------ G 0.75 0.63 0.69 C 0.25 0.37 0.31 0000 --- --- --- --- 020846 00000 ------------ T 0.75 0.63 0.69 C 0.25 0.37 0.31 0000 --- --- --- --- 020874 00000 ------------ C 0.75 0.63 0.69 T 0.25 0.37 0.31 0000 --- --- --- --- 020883 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020924 00000 ------------ T 0.75 0.63 0.69 C 0.25 0.37 0.31 0000 --- --- --- --- 020937 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020982 00000 ------------ A 0.75 0.63 0.69 G 0.25 0.37 0.31 0000 --- --- --- --- 020985 00000 ------------ T 0.67 0.63 0.65 C 0.33 0.37 0.35 0000 --- --- --- --- 021027 00000 ------------ C 0.75 0.63 0.69 T 0.25 0.37 0.31 0000 --- --- --- --- 021053 00000 ------------ C 0.90 0.91 0.90 A 0.10 0.09 0.10 0000 --- --- --- --- 021149 00000 ------------ T 0.75 0.63 0.69 C 0.25 0.37 0.31 0000 --- --- --- --- 023669 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 023703 00000 ------------ G 0.85 0.72 0.78 C 0.15 0.28 0.22 0000 --- --- --- --- 024189 00000 ------------ C 0.93 1.00 0.96 G 0.07 0.00 0.04 0000 --- --- --- --- 024208 00000 ------------ C 0.93 0.90 0.92 T 0.07 0.10 0.08 0000 --- --- --- --- 024235 00000 ------------ T 0.95 0.89 0.93 A 0.05 0.11 0.07 0000 --- --- --- --- 024525 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 024833 00000 ------------ A 0.79 0.63 0.71 C 0.21 0.37 0.29 0000 --- --- --- --- 025072 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 025099 02648 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0863 AGG AAG ARG(R) LYS(K) 025226 02775 SYNON C 0.90 1.00 0.95 T 0.10 0.00 0.05 0905 ACC ACT THR(T) THR(T) 025256 02805 SYNON C 0.88 0.72 0.80 T 0.12 0.28 0.20 0915 GCC GCT ALA(A) ALA(A) 025447 00000 ------------ - 0.77 0.63 0.70 + 0.23 0.37 0.30 0000 --- --- --- --- 025722 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 025751 00000 ------------ C 0.80 0.57 0.68 A 0.20 0.43 0.32 0000 --- --- --- --- 025752 00000 ------------ A 0.74 0.57 0.65 G 0.26 0.43 0.35 0000 --- --- --- --- 025838 00000 ------------ T 0.77 0.57 0.67 C 0.23 0.43 0.33 0000 --- --- --- --- 025879 00000 ------------ A 0.90 0.91 0.90 G 0.10 0.09 0.10 0000 --- --- --- --- 025884 00000 ------------ T 0.77 0.55 0.66 C 0.23 0.45 0.34 0000 --- --- --- --- 025974 00000 ------------ T 0.77 0.63 0.70 C 0.23 0.37 0.30 0000 --- --- --- --- 025982 00000 ------------ A 0.77 0.64 0.71 C 0.23 0.36 0.29 0000 --- --- --- --- 026076 00000 ------------ T 0.77 0.64 0.71 C 0.23 0.36 0.29 0000 --- --- --- --- 026116 00000 ------------ C 0.81 0.64 0.72 G 0.19 0.36 0.28 0000 --- --- --- --- 026177 00000 ------------ G 0.87 0.73 0.80 A 0.13 0.27 0.20 0000 --- --- --- --- 026331 00000 ------------ C 0.80 0.64 0.72 T 0.20 0.36 0.28 0000 --- --- --- --- 026495 00000 ------------ C 0.72 0.62 0.67 T 0.28 0.38 0.33 0000 --- --- --- --- 026520 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 026578 00000 ------------ G 0.59 0.40 0.50 C 0.41 0.60 0.50 0000 --- --- --- --- 026629 00000 ------------ G 0.89 0.95 0.92 T 0.11 0.05 0.08 0000 --- --- --- --- 027159 00000 ------------ C 0.73 0.52 0.63 T 0.27 0.48 0.37 0000 --- --- --- --- 027196 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 027678 00000 ------------ C 0.57 0.48 0.52 G 0.43 0.52 0.48 0000 --- --- --- --- 027800 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 028281 00000 ------------ C 0.92 0.96 0.94 T 0.08 0.04 0.06 0000 --- --- --- --- 028417 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 028423 00000 ------------ A 0.96 0.94 0.95 C 0.04 0.06 0.05 0000 --- --- --- --- 028433 00000 ------------ C 0.74 0.50 0.63 T 0.26 0.50 0.37 0000 --- --- --- --- 028473 00000 ------------ C 0.79 0.81 0.79 T 0.21 0.19 0.21 0000 --- --- --- --- 028483 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 028521 00000 ------------ A 0.95 0.94 0.95 C 0.05 0.06 0.05 0000 --- --- --- --- 028537 00000 ------------ + 0.86 0.92 0.89 - 0.14 0.08 0.11 0000 --- --- --- --- 028609 00000 ------------ C 0.86 0.94 0.90 T 0.14 0.06 0.10 0000 --- --- --- --- 028697 00000 ------------ T 0.68 0.89 0.78 C 0.32 0.11 0.23 0000 --- --- --- --- 028735 00000 ------------ A 0.81 1.00 0.90 C 0.19 0.00 0.10 0000 --- --- --- --- 028795 00000 ------------ A 0.73 0.50 0.62 G 0.27 0.50 0.38 0000 --- --- --- --- 028859 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 028997 00000 ------------ T 0.73 0.97 0.83 C 0.27 0.03 0.17 0000 --- --- --- --- 029026 00000 ------------ C 0.95 0.94 0.95 G 0.05 0.06 0.05 0000 --- --- --- --- 029044 00000 ------------ T 0.73 0.94 0.82 C 0.27 0.06 0.17 0000 --- --- --- --- 029109 00000 ------------ G 0.60 0.59 0.60 A 0.40 0.41 0.40 0000 --- --- --- --- 029293 00000 ------------ C 0.76 0.93 0.85 T 0.24 0.07 0.15 0000 --- --- --- --- 029363 00000 ------------ C 0.89 0.93 0.91 T 0.11 0.07 0.09 0000 --- --- --- --- 029407 00000 ------------ C 0.89 0.93 0.91 T 0.11 0.07 0.09 0000 --- --- --- --- 029440 00000 ------------ C 0.89 0.93 0.91 T 0.11 0.07 0.09 0000 --- --- --- --- 029517 00000 ------------ C 0.88 0.98 0.93 T 0.12 0.02 0.07 0000 --- --- --- --- 029868 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 029885 00000 ------------ C 0.75 0.93 0.84 G 0.25 0.07 0.16 0000 --- --- --- --- 029891 00000 ------------ T 0.75 0.93 0.84 A 0.25 0.07 0.16 0000 --- --- --- --- 030169 00000 ------------ A 0.93 0.93 0.93 G 0.07 0.07 0.07 0000 --- --- --- --- 030238 00000 ------------ T 0.90 0.93 0.91 C 0.10 0.07 0.09 0000 --- --- --- --- 030360 00000 ------------ G 0.90 0.95 0.92 A 0.10 0.05 0.08 0000 --- --- --- --- 030415 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 030728 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030729 00000 ------------ G 0.90 0.93 0.91 A 0.10 0.07 0.09 0000 --- --- --- --- 030756 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 030887 00000 ------------ T 0.95 0.93 0.94 C 0.05 0.07 0.06 0000 --- --- --- --- 031050 00000 ------------ C 0.90 0.93 0.91 T 0.10 0.07 0.09 0000 --- --- --- --- 031147 00000 ------------ C 0.90 0.93 0.91 T 0.10 0.07 0.09 0000 --- --- --- --- 031257 00000 ------------ A 0.75 0.93 0.83 C 0.25 0.07 0.17 0000 --- --- --- --- 031260 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 031320 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 031531 00000 ------------ G 0.98 0.95 0.97 A 0.02 0.05 0.03 0000 --- --- --- --- 031547 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031555 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031556 00000 ------------ G 0.89 0.92 0.90 A 0.11 0.08 0.10 0000 --- --- --- --- 031699 00000 ------------ G 0.90 0.93 0.91 C 0.10 0.07 0.09 0000 --- --- --- --- 031707 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 031715 00000 ------------ G 0.90 0.93 0.91 A 0.10 0.07 0.09 0000 --- --- --- --- 031876 00000 ------------ A 0.90 0.93 0.92 G 0.10 0.07 0.08 0000 --- --- --- --- 031910 00000 ------------ G 0.91 0.93 0.92 A 0.09 0.07 0.08 0000 --- --- --- --- 031935 00000 ------------ T 0.91 0.93 0.92 C 0.09 0.07 0.08 0000 --- --- --- --- 031937 00000 ------------ T 0.91 0.93 0.92 C 0.09 0.07 0.08 0000 --- --- --- --- 031939 00000 ------------ T 0.91 0.93 0.92 C 0.09 0.07 0.08 0000 --- --- --- --- 032068 00000 ------------ A 0.93 0.87 0.90 C 0.07 0.13 0.10 0000 --- --- --- --- 032110 00000 ------------ G 0.91 0.93 0.92 A 0.09 0.07 0.08 0000 --- --- --- --- 032188 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 032220 00000 ------------ C 0.59 0.59 0.59 T 0.41 0.41 0.41 0000 --- --- --- --- 032221 00000 ------------ G 0.91 0.93 0.92 C 0.09 0.07 0.08 0000 --- --- --- --- 032266 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 032405 00000 ------------ A 0.90 0.93 0.91 T 0.10 0.07 0.09 0000 --- --- --- --- 032437 00000 ------------ A 0.90 0.93 0.91 C 0.10 0.07 0.09 0000 --- --- --- --- 032546 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 032682 00000 ------------ A 0.89 0.93 0.91 G 0.11 0.07 0.09 0000 --- --- --- --- 032701 00000 ------------ C 0.87 1.00 0.93 T 0.13 0.00 0.07 0000 --- --- --- --- 032756 00000 ------------ T 0.89 0.93 0.91 C 0.11 0.07 0.09 0000 --- --- --- --- 032819 00000 ------------ C 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 032827 00000 ------------ T 0.89 0.93 0.91 C 0.11 0.07 0.09 0000 --- --- --- --- 033174 00000 ------------ T 0.93 0.93 0.93 C 0.07 0.07 0.07 0000 --- --- --- --- 033194* 033279 00000 ------------ G 0.88 1.00 0.93 A 0.12 0.00 0.07 0000 --- --- --- --- 033374 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 033524 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 033616 00000 ------------ A 0.62 0.57 0.60 G 0.38 0.43 0.40 0000 --- --- --- --- 033639 00000 ------------ G 0.85 0.98 0.91 A 0.15 0.02 0.09 0000 --- --- --- --- 033821 00000 ------------ G 0.64 0.57 0.61 T 0.36 0.43 0.39 0000 --- --- --- --- 033918 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 034281 00000 ------------ A 0.43 0.59 0.51 G 0.57 0.41 0.49 0000 --- --- --- --- 034390 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 034413 00000 ------------ G 0.43 0.59 0.51 A 0.57 0.41 0.49 0000 --- --- --- --- 034480 00000 ------------ C 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 034483 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 034535 00000 ------------ G 0.76 0.65 0.71 A 0.24 0.35 0.29 0000 --- --- --- --- 034667 00000 ------------ G 0.58 0.41 0.50 A 0.42 0.59 0.50 0000 --- --- --- --- 034769 00000 ------------ G 0.42 0.59 0.50 C 0.58 0.41 0.50 0000 --- --- --- --- 034885 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 034913 00000 ------------ C 0.43 0.59 0.51 T 0.57 0.41 0.49 0000 --- --- --- --- 035086 00000 ------------ C 0.57 0.42 0.50 T 0.43 0.57 0.50 0000 --- --- --- --- 035164 00000 ------------ T 0.43 0.60 0.51 C 0.57 0.40 0.49 0000 --- --- --- --- 035267 00000 ------------ G 0.42 0.59 0.50 C 0.58 0.41 0.50 0000 --- --- --- --- 035347 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 035532 00000 ------------ G 0.94 0.89 0.91 T 0.06 0.11 0.09 0000 --- --- --- --- 035538 00000 ------------ C 0.42 0.59 0.50 T 0.58 0.41 0.50 0000 --- --- --- --- 035548 00000 ------------ C 0.42 0.59 0.50 T 0.58 0.41 0.50 0000 --- --- --- --- 036021 00000 ------------ G 0.89 0.89 0.89 A 0.11 0.11 0.11 0000 --- --- --- --- 036176 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 036406 03731 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 1224 GGT GAT GLY(G) ASP(D) 036488 03813 SYNON C 0.93 1.00 0.97 A 0.07 0.00 0.03 1251 CCC CCA PRO(P) PRO(P) 036591 00000 ------------ C 0.95 0.93 0.94 T 0.05 0.07 0.06 0000 --- --- --- --- 036697 00000 ------------ C 0.59 0.61 0.60 G 0.41 0.39 0.40 0000 --- --- --- --- 036735 00000 ------------ G 0.58 0.55 0.57 A 0.42 0.45 0.43 0000 --- --- --- --- 036750 00000 ------------ T 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 036863 00000 ------------ G 0.73 0.86 0.79 C 0.27 0.14 0.21 0000 --- --- --- --- 036947 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 036957 00000 ------------ G 0.83 0.93 0.88 C 0.17 0.07 0.12 0000 --- --- --- --- 037287 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 037376 00000 ------------ C 0.70 0.67 0.68 G 0.30 0.33 0.32 0000 --- --- --- --- 037450 00000 ------------ C 0.93 0.93 0.93 G 0.07 0.07 0.07 0000 --- --- --- --- 037827 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 038089 04160 NON-SYN T 0.98 1.00 0.99 C 0.02 0.00 0.01 1367 ATA ACA ILE(I) THR(T) 038161 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 038383 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 038483 00000 ------------ C 0.91 0.89 0.90 T 0.09 0.11 0.10 0000 --- --- --- --- 038538 00000 ------------ T 0.87 0.89 0.88 C 0.13 0.11 0.12 0000 --- --- --- --- 038834 00000 ------------ G 0.52 0.67 0.60 A 0.48 0.33 0.40 0000 --- --- --- --- 038908 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 038926 00000 ------------ T 0.87 0.91 0.89 C 0.13 0.09 0.11 0000 --- --- --- --- 038931 00000 ------------ C 0.89 0.91 0.90 T 0.11 0.09 0.10 0000 --- --- --- --- 039058 00000 ------------ G 0.96 0.93 0.95 A 0.04 0.07 0.05 0000 --- --- --- --- 039069 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 039536 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 039654 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 039727 00000 ------------ C 0.57 0.69 0.63 G 0.43 0.31 0.37 0000 --- --- --- --- 039807 00000 ------------ C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 040019 00000 ------------ - 0.02 0.07 0.04 + 0.98 0.93 0.96 0000 --- --- --- --- 040124 00000 ------------ A 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 040147 00000 ------------ - 0.46 0.33 0.39 + 0.54 0.67 0.61 0000 --- --- --- --- 040310 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 040690 04371 SYNON C 0.91 0.90 0.91 T 0.09 0.10 0.09 1437 GCC GCT ALA(A) ALA(A) 041130 00000 ------------ A 0.90 0.91 0.90 G 0.10 0.09 0.10 0000 --- --- --- --- 041251 00000 ------------ C 0.88 0.89 0.88 T 0.12 0.11 0.12 0000 --- --- --- --- 041744 00000 ------------ A 0.59 0.43 0.51 G 0.41 0.57 0.49 0000 --- --- --- --- 041753 00000 ------------ C 0.57 0.66 0.62 A 0.43 0.34 0.38 0000 --- --- --- --- 042171 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 042908 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 043078 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 043103 00000 ------------ C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 043118 00000 ------------ G 0.47 0.53 0.50 A 0.53 0.47 0.50 0000 --- --- --- --- 043169 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 043170 00000 ------------ G 0.57 0.47 0.53 A 0.42 0.53 0.47 0000 --- --- --- --- 043321 00000 ------------ G 0.85 0.79 0.82 A 0.15 0.21 0.18 0000 --- --- --- --- 043810 00000 ------------ G 0.94 0.74 0.84 T 0.06 0.26 0.16 0000 --- --- --- --- 043928 00000 ------------ T 0.57 0.48 0.52 C 0.43 0.52 0.48 0000 --- --- --- --- 044059 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 044186 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 044207 00000 ------------ C 0.87 0.90 0.88 T 0.13 0.10 0.12 0000 --- --- --- --- 044566 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 044692 04956 SYNON T 0.57 0.55 0.56 C 0.43 0.45 0.44 1632 CCT CCC PRO(P) PRO(P) 044882 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 044949 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 045206 00000 ------------ G 0.83 1.00 0.90 A 0.17 0.00 0.10 0000 --- --- --- --- 045444 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 045522 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 045796 00000 ------------ G 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 045850 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 046001 00000 ------------ C 0.93 0.89 0.91 G 0.07 0.11 0.09 0000 --- --- --- --- 046239 00000 ------------ T 0.79 0.75 0.77 G 0.21 0.25 0.23 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002933: C 003646: CCTTCCCTGAGACCCCACCCCTTCTGAGACTCCTCCCCTTCTGAGTCCCTC 005815: CC 007071: G 013199: GTTT 015740: A 019473: G 025447: A 027196: CAAAAA 027800: A 028537: GCTCTTCATGAGACCCCGCCTCTCCTCAAGGCCATGCCCATCCCCTGAGGGCCCCCCACCTCTTCTCAAGGCCACGCCCTCTGAGGCCCTGACTCCTCCCAGGCCAGGCTCTTCATGAGACCCCGCCTCTCCTCAAGGCCATGCCCATCCCCTGAGGGCCTCCCACCTCTTCTCAAGGCCACGCCCTCTGAGGCCCTGACTCCTCCCAGGCCAG 029868: G 033524: AT 037287: G 040019: C 040147: T The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 033194 A 0.07 0.00 0.03 C 0.83 0.93 0.87 G 0.11 0.07 0.09 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000275 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000310 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000546 00000 ------------ T 0.80 0.72 0.76 C 0.20 0.28 0.24 0000 --- --- --- --- 000548 00000 ------------ G 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 000563 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 000846 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 001039 00000 ------------ C 0.88 0.91 0.89 T 0.12 0.09 0.11 0000 --- --- --- --- 001464 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 002221 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002306 00000 ------------ A 0.88 0.91 0.89 G 0.12 0.09 0.11 0000 --- --- --- --- 002441 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002567 00000 ------------ G 0.77 0.73 0.75 T 0.23 0.27 0.25 0000 --- --- --- --- 002595 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 003029 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 003100 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 003818 00000 ------------ G 0.80 0.52 0.66 A 0.20 0.48 0.34 0000 --- --- --- --- 004086 00000 ------------ - 0.28 0.50 0.40 + 0.72 0.50 0.60 0000 --- --- --- --- 004106 00000 ------------ A 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- 004544 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 004652 00000 ------------ C 0.96 0.93 0.95 G 0.04 0.07 0.05 0000 --- --- --- --- 004792 00000 ------------ C 0.96 0.93 0.95 G 0.04 0.07 0.05 0000 --- --- --- --- 004803 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 004824 00000 ------------ A 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 005153 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005157 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005161 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005191 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 005206 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005258 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 005337 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 005844 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006104 00000 ------------ T 0.33 0.70 0.51 G 0.67 0.30 0.49 0000 --- --- --- --- 006699 00000 ------------ A 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 006887 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 007171 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007878 00000 ------------ C 0.87 0.91 0.89 T 0.13 0.09 0.11 0000 --- --- --- --- 008171 EXON -1 SPLICE G 0.96 0.93 0.95 A 0.04 0.07 0.05 0000 --- --- --- --- 008391 00302 SYNON C 0.92 1.00 0.96 T 0.08 0.00 0.04 0070 CTC CTT LEU(L) LEU(L) 008588 00499 NON-SYN T 0.98 1.00 0.99 C 0.02 0.00 0.01 0136 GTA GCA VAL(V) ALA(A) 008646 00557 SYNON T 1.00 0.98 0.99 C 0.00 0.02 0.01 0155 ATT ATC ILE(I) ILE(I) 009707 01618 3' UTR G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 009776 01687 3' UTR A 0.77 0.70 0.73 G 0.23 0.30 0.27 0000 --- --- --- --- 010266 00000 ------------ C 0.26 0.70 0.50 T 0.74 0.30 0.50 0000 --- --- --- --- 010326 00000 ------------ C 0.34 0.70 0.54 T 0.66 0.30 0.46 0000 --- --- --- --- 011386 00000 ------------ T 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 011887 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 011935 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002595: T 004086: T 006887: AAT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000081 00000 ------------ T 1.00 0.97 0.98 C 0.00 0.03 0.02 0000 --- --- --- --- 000814 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 001018 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 001197 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 001257 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001258 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001281 00000 ------------ A 0.58 0.72 0.65 G 0.42 0.28 0.35 0000 --- --- --- --- 001453 00000 ------------ A 0.83 0.83 0.83 G 0.17 0.17 0.17 0000 --- --- --- --- 001497 00000 ------------ C 0.88 0.88 0.88 T 0.12 0.12 0.12 0000 --- --- --- --- 001780 00000 ------------ - 0.58 0.71 0.64 + 0.42 0.29 0.36 0000 --- --- --- --- 001836 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001938 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 002339 00000 ------------ T 0.98 0.71 0.86 C 0.02 0.29 0.14 0000 --- --- --- --- 002377 00000 ------------ A 0.58 0.75 0.66 C 0.42 0.25 0.34 0000 --- --- --- --- 002459 00000 ------------ G 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 002627 00000 ------------ C 1.00 0.86 0.93 G 0.00 0.14 0.07 0000 --- --- --- --- 002698 00000 ------------ G 0.97 0.69 0.82 A 0.03 0.31 0.17 0000 --- --- --- --- 002953 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 002955 00000 ------------ G 0.86 1.00 0.94 A 0.14 0.00 0.06 0000 --- --- --- --- 003268 00000 ------------ T 0.85 0.88 0.87 A 0.15 0.12 0.13 0000 --- --- --- --- 003274 00000 ------------ C 0.92 0.76 0.82 A 0.08 0.24 0.18 0000 --- --- --- --- 003368 00000 ------------ A 0.83 0.85 0.84 T 0.17 0.15 0.16 0000 --- --- --- --- 003486 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 003522 00000 ------------ C 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 003643 00000 ------------ G 0.85 0.87 0.86 T 0.15 0.13 0.14 0000 --- --- --- --- 004270 00000 ------------ - 0.23 0.11 0.17 + 0.77 0.89 0.83 0000 --- --- --- --- 004375 00000 ------------ - 0.17 0.15 0.16 + 0.83 0.85 0.84 0000 --- --- --- --- 005091 00000 ------------ G 0.58 0.72 0.65 A 0.42 0.28 0.35 0000 --- --- --- --- 005195 00000 ------------ G 0.56 0.83 0.69 C 0.44 0.17 0.31 0000 --- --- --- --- 005438 00000 ------------ A 0.85 0.85 0.85 T 0.15 0.15 0.15 0000 --- --- --- --- 012804 00000 ------------ G 0.96 0.76 0.88 T 0.04 0.24 0.12 0000 --- --- --- --- 013142 00000 ------------ C 0.90 0.70 0.80 T 0.10 0.30 0.20 0000 --- --- --- --- 013291 00000 ------------ - 0.65 0.34 0.50 + 0.35 0.66 0.50 0000 --- --- --- --- 013300 00000 ------------ - 1.00 0.91 0.96 + 0.00 0.09 0.04 0000 --- --- --- --- 013855 00000 ------------ A 1.00 0.83 0.91 T 0.00 0.17 0.09 0000 --- --- --- --- 013873 00000 ------------ C 0.63 0.85 0.74 A 0.37 0.15 0.26 0000 --- --- --- --- 014126 00000 ------------ C 0.83 0.65 0.74 T 0.17 0.35 0.26 0000 --- --- --- --- 014165 00000 ------------ T 0.96 0.67 0.82 C 0.04 0.33 0.18 0000 --- --- --- --- 014197 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 014316 00000 ------------ G 0.83 0.83 0.83 A 0.17 0.17 0.17 0000 --- --- --- --- 026200 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026279 00000 ------------ C 0.94 0.84 0.89 T 0.06 0.16 0.11 0000 --- --- --- --- 026424 00000 ------------ - 0.00 0.09 0.04 + 1.00 0.91 0.96 0000 --- --- --- --- 027204 00000 ------------ A 0.71 0.48 0.60 G 0.29 0.52 0.40 0000 --- --- --- --- 027386 00000 ------------ G 0.91 0.84 0.88 A 0.09 0.16 0.12 0000 --- --- --- --- 027400 00000 ------------ C 0.95 0.66 0.81 G 0.05 0.34 0.19 0000 --- --- --- --- 027484 00000 ------------ A 0.91 0.98 0.94 G 0.09 0.02 0.06 0000 --- --- --- --- 027555 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 027696 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 027935 00000 ------------ G 0.75 0.48 0.61 A 0.25 0.52 0.39 0000 --- --- --- --- 027978 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 028141 00000 ------------ C 0.74 0.80 0.77 T 0.26 0.20 0.23 0000 --- --- --- --- 036626 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 036652 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 036681 00000 ------------ A 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 036812 00000 ------------ T 0.73 0.78 0.76 C 0.27 0.22 0.24 0000 --- --- --- --- 036924 00000 ------------ - 0.75 0.80 0.77 + 0.25 0.20 0.23 0000 --- --- --- --- 037347 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 037402 00000 ------------ G 0.92 0.87 0.89 A 0.08 0.13 0.11 0000 --- --- --- --- 037420 00000 ------------ G 1.00 0.87 0.94 C 0.00 0.13 0.06 0000 --- --- --- --- 037597 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 037913 00000 ------------ C 0.90 0.98 0.94 T 0.10 0.02 0.06 0000 --- --- --- --- 038203 00000 ------------ A 0.90 0.98 0.94 G 0.10 0.02 0.06 0000 --- --- --- --- 038362 00000 ------------ A 0.75 0.80 0.78 G 0.25 0.20 0.22 0000 --- --- --- --- 038873 00000 ------------ A 0.90 0.83 0.86 G 0.10 0.17 0.14 0000 --- --- --- --- 038913 00000 ------------ T 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 039042 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 039127 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 039202 00000 ------------ C 0.90 0.91 0.90 T 0.10 0.09 0.10 0000 --- --- --- --- 039229 00000 ------------ C 0.73 0.77 0.75 G 0.27 0.23 0.25 0000 --- --- --- --- 039434 00000 ------------ A 0.75 0.80 0.77 G 0.25 0.20 0.23 0000 --- --- --- --- 039596 00000 ------------ C 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 039624 00000 ------------ T 0.91 0.97 0.94 A 0.09 0.03 0.06 0000 --- --- --- --- 039668 00000 ------------ A 0.73 0.79 0.76 G 0.27 0.21 0.24 0000 --- --- --- --- 046760 00000 ------------ A 0.75 0.80 0.78 G 0.25 0.20 0.22 0000 --- --- --- --- 046984 00000 ------------ G 0.75 0.80 0.78 T 0.25 0.20 0.22 0000 --- --- --- --- 047573 00000 ------------ A 0.72 0.78 0.75 G 0.28 0.22 0.25 0000 --- --- --- --- 048104 00000 ------------ G 0.89 0.82 0.85 A 0.11 0.18 0.15 0000 --- --- --- --- 048115 00000 ------------ C 1.00 0.91 0.95 A 0.00 0.09 0.05 0000 --- --- --- --- 048145 00000 ------------ G 0.82 0.82 0.82 A 0.18 0.18 0.18 0000 --- --- --- --- 048751 00000 ------------ A 0.73 0.78 0.76 G 0.27 0.22 0.24 0000 --- --- --- --- 048851 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 048860 00000 ------------ C 0.98 0.72 0.85 T 0.02 0.28 0.15 0000 --- --- --- --- 048996 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 049204 00000 ------------ C 0.90 0.83 0.87 A 0.10 0.17 0.13 0000 --- --- --- --- 049235 00000 ------------ G 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 049429 00000 ------------ G 0.75 0.80 0.78 A 0.25 0.20 0.22 0000 --- --- --- --- 049524 00000 ------------ C 0.75 0.80 0.78 T 0.25 0.20 0.22 0000 --- --- --- --- 049527 00000 ------------ G 0.75 0.80 0.78 C 0.25 0.20 0.22 0000 --- --- --- --- 049579 00000 ------------ C 0.73 0.78 0.76 G 0.27 0.22 0.24 0000 --- --- --- --- 049595 00000 ------------ C 0.91 0.83 0.87 T 0.09 0.17 0.13 0000 --- --- --- --- 049755 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 052399 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 052404 00000 ------------ A 0.92 0.86 0.89 G 0.08 0.14 0.11 0000 --- --- --- --- 052433 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 052747 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 053028 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 053253 00000 ------------ C 0.92 0.83 0.87 T 0.08 0.17 0.13 0000 --- --- --- --- 053536 00000 ------------ G 1.00 0.86 0.93 T 0.00 0.14 0.07 0000 --- --- --- --- 053763 00000 ------------ T 0.73 0.74 0.73 A 0.27 0.26 0.27 0000 --- --- --- --- 053770 00000 ------------ C 0.91 0.83 0.87 T 0.09 0.17 0.13 0000 --- --- --- --- 053804 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 053831 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 054139 00000 ------------ A 1.00 0.87 0.93 G 0.00 0.13 0.07 0000 --- --- --- --- 054210 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 054514 00000 ------------ A 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 054599 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 054932 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 066097 00000 ------------ A 0.72 0.74 0.73 C 0.28 0.26 0.27 0000 --- --- --- --- 066401 00000 ------------ C 0.85 0.84 0.84 T 0.15 0.16 0.16 0000 --- --- --- --- 066411 00000 ------------ C 0.78 0.78 0.78 T 0.22 0.22 0.22 0000 --- --- --- --- 066482 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 066689 00000 ------------ - 0.09 0.16 0.12 + 0.91 0.84 0.88 0000 --- --- --- --- 066756 00000 ------------ A 0.85 0.91 0.88 G 0.15 0.09 0.12 0000 --- --- --- --- 067214 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 067522 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 067536 00000 ------------ - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 067549 00000 ------------ C 0.74 0.75 0.74 T 0.26 0.25 0.26 0000 --- --- --- --- 067726 00000 ------------ C 0.97 0.93 0.95 T 0.03 0.07 0.05 0000 --- --- --- --- 067920 00000 ------------ - 0.92 1.00 0.96 + 0.08 0.00 0.04 0000 --- --- --- --- 068012 00000 ------------ T 0.82 0.91 0.87 C 0.18 0.09 0.13 0000 --- --- --- --- 068126 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 068307 00000 ------------ G 0.69 0.75 0.72 T 0.31 0.25 0.28 0000 --- --- --- --- 068339 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 068358 00000 ------------ C 0.85 0.82 0.84 A 0.15 0.17 0.16 0000 --- --- --- --- 068365 00000 ------------ G 0.85 0.82 0.84 T 0.15 0.17 0.16 0000 --- --- --- --- 068463 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 071352 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 071465 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 071606 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 071831 00000 ------------ G 0.85 0.87 0.86 A 0.15 0.13 0.14 0000 --- --- --- --- 071967 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 072069 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 072096 00000 ------------ T 0.86 0.81 0.84 C 0.14 0.19 0.16 0000 --- --- --- --- 072214 00000 ------------ T 0.88 1.00 0.93 C 0.12 0.00 0.07 0000 --- --- --- --- 074215 00000 ------------ - 0.61 0.61 0.61 + 0.39 0.39 0.39 0000 --- --- --- --- 074795 00000 ------------ - 0.08 0.25 0.16 + 0.92 0.75 0.84 0000 --- --- --- --- 074820 00000 ------------ - 0.15 0.00 0.09 + 0.85 1.00 0.91 0000 --- --- --- --- 074950 00000 ------------ G 0.93 0.77 0.84 A 0.07 0.23 0.16 0000 --- --- --- --- 075718 00000 ------------ A 0.73 0.97 0.84 G 0.27 0.03 0.16 0000 --- --- --- --- 075938 00000 ------------ - 0.00 0.10 0.05 + 1.00 0.90 0.95 0000 --- --- --- --- 075959 00000 ------------ T 0.39 0.68 0.52 C 0.61 0.33 0.48 0000 --- --- --- --- 075997 00000 ------------ T 0.39 0.68 0.52 A 0.61 0.32 0.48 0000 --- --- --- --- 076000 00000 ------------ C 0.39 0.68 0.52 T 0.61 0.32 0.48 0000 --- --- --- --- 076012 00000 ------------ G 0.38 0.68 0.53 A 0.62 0.32 0.47 0000 --- --- --- --- 076133 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 076391 00000 ------------ A 0.38 0.68 0.53 G 0.62 0.32 0.47 0000 --- --- --- --- 076747 00000 ------------ G 0.89 0.76 0.83 T 0.11 0.24 0.17 0000 --- --- --- --- 077159 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 077262 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 077538 00000 ------------ G 0.90 0.76 0.83 T 0.10 0.24 0.17 0000 --- --- --- --- 078042 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 078100 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 078613 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 078694 00000 ------------ G 0.84 0.90 0.87 A 0.16 0.10 0.13 0000 --- --- --- --- 078706 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 078830 00000 ------------ A 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 079008 00000 ------------ A 0.76 0.82 0.79 T 0.24 0.18 0.21 0000 --- --- --- --- 079118 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 079155 00000 ------------ G 0.52 0.73 0.62 A 0.48 0.27 0.38 0000 --- --- --- --- 079169 00000 ------------ G 0.87 0.52 0.70 A 0.13 0.48 0.30 0000 --- --- --- --- 079651 00000 ------------ G 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 079653 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 079658 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 079691 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 079707 00000 ------------ T 0.76 0.30 0.53 C 0.24 0.70 0.47 0000 --- --- --- --- 079749 00000 ------------ C 0.89 0.76 0.83 T 0.11 0.24 0.17 0000 --- --- --- --- 080837 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 081074 00000 ------------ G 0.98 0.86 0.92 A 0.02 0.14 0.08 0000 --- --- --- --- 081084 00000 ------------ T 0.91 0.52 0.72 G 0.09 0.48 0.28 0000 --- --- --- --- 081300 00000 ------------ C 0.73 0.98 0.85 G 0.27 0.02 0.15 0000 --- --- --- --- 081301 00000 ------------ G 0.89 0.52 0.70 A 0.11 0.48 0.30 0000 --- --- --- --- 081803 00000 ------------ T 0.71 0.98 0.84 G 0.29 0.02 0.16 0000 --- --- --- --- 082787 00000 ------------ C 0.65 0.98 0.82 T 0.35 0.02 0.18 0000 --- --- --- --- 083016 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 083072 00000 ------------ C 0.94 0.91 0.93 T 0.06 0.09 0.07 0000 --- --- --- --- 083139 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 083270 00000 ------------ C 0.88 0.52 0.70 T 0.12 0.48 0.30 0000 --- --- --- --- 083485 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 083486 00000 ------------ G 0.73 0.83 0.78 A 0.27 0.17 0.22 0000 --- --- --- --- 083509 00000 ------------ A 1.00 0.91 0.96 G 0.00 0.09 0.04 0000 --- --- --- --- 092506 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 092712 00000 ------------ A 0.98 0.86 0.92 G 0.02 0.14 0.08 0000 --- --- --- --- 092897 00000 ------------ G 0.94 0.84 0.89 A 0.06 0.16 0.11 0000 --- --- --- --- 092939 00000 ------------ C 0.88 0.48 0.68 T 0.12 0.52 0.32 0000 --- --- --- --- 093065 00000 ------------ A 0.94 0.76 0.85 G 0.06 0.24 0.15 0000 --- --- --- --- 093106 00000 ------------ A 0.73 0.84 0.78 C 0.27 0.16 0.22 0000 --- --- --- --- 093302 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 093758 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 094406 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 094511 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 094880 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 095505 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 095548 00000 ------------ G 0.73 0.84 0.78 A 0.27 0.16 0.22 0000 --- --- --- --- 099341 00000 ------------ C 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 099599 00000 ------------ C 0.88 0.52 0.70 T 0.12 0.48 0.30 0000 --- --- --- --- 099649 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 099706 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 100132 00000 ------------ C 0.74 0.86 0.80 T 0.26 0.14 0.20 0000 --- --- --- --- 100192 00000 ------------ - 0.06 0.24 0.15 + 0.94 0.76 0.85 0000 --- --- --- --- 100336 00000 ------------ C 0.81 0.28 0.55 T 0.19 0.72 0.45 0000 --- --- --- --- 100564 00000 ------------ T 0.94 0.83 0.88 C 0.06 0.17 0.12 0000 --- --- --- --- 100711 00000 ------------ C 0.81 0.28 0.55 T 0.19 0.72 0.45 0000 --- --- --- --- 100838 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 100939 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 101142 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 101211 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 101340 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 101637 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 101643 00000 ------------ T 0.83 0.91 0.87 C 0.17 0.09 0.13 0000 --- --- --- --- 101664 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 101718 00000 ------------ C 0.67 0.98 0.82 A 0.33 0.02 0.18 0000 --- --- --- --- 101814 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 102510 02616 SYNON C 0.85 1.00 0.92 G 0.15 0.00 0.08 0748 CCC CCG PRO(P) PRO(P) 102996 03102 SYNON C 0.98 1.00 0.99 A 0.02 0.00 0.01 0910 CCC CCA PRO(P) PRO(P) 103222 03328 NON-SYN G 0.98 0.85 0.91 T 0.02 0.15 0.09 0986 GCC TCC ALA(A) SER(S) 103234 03340 NON-SYN A 0.98 0.98 0.98 G 0.02 0.02 0.02 0990 AGG GGG ARG(R) GLY(G) 103297 03403 NON-SYN C 0.67 0.98 0.82 G 0.33 0.02 0.18 1011 CAG GAG GLN(Q) GLU(E) 103563 03669 3' UTR T 0.67 0.98 0.82 A 0.33 0.02 0.18 0000 --- --- --- --- 103684 03790 3' UTR - 0.94 0.74 0.84 + 0.06 0.26 0.16 0000 --- --- --- --- 103895 04001 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 104078 04184 3' UTR G 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 104101 04207 3' UTR A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 104519 04625 3' UTR A 0.88 0.57 0.73 G 0.12 0.43 0.27 0000 --- --- --- --- 104597 04703 3' UTR C 0.73 0.80 0.76 T 0.27 0.20 0.24 0000 --- --- --- --- 104702 04808 3' UTR T 0.81 0.30 0.56 C 0.19 0.70 0.44 0000 --- --- --- --- 104739 04845 3' UTR A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 104952 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 105356 00000 ------------ G 1.00 0.86 0.93 A 0.00 0.14 0.07 0000 --- --- --- --- 105405 00000 ------------ A 0.96 0.98 0.97 G 0.04 0.02 0.03 0000 --- --- --- --- 106191 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 106346 00000 ------------ C 0.70 0.98 0.83 T 0.30 0.02 0.17 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001780: AACA 004270: AT 004375: AG 013291: CCT 013300: ACTTCCTGCTCCTCCTCCTCCT 026424: TATTTT 027555: A 036924: AGA 066689: A 067536: G 067920: T 071352: A 071465: A 074215: AGAA 074795: CTT 074820: TT 075938: GT 079691: TTTC 100192: AT 103684: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000980 00000 ------------ T 0.90 1.00 0.94 C 0.10 0.00 0.06 0000 --- --- --- --- 001026 00000 ------------ T 0.86 0.95 0.90 C 0.14 0.05 0.10 0000 --- --- --- --- 001199 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 001225 00000 ------------ A 0.66 0.71 0.69 G 0.34 0.29 0.31 0000 --- --- --- --- 001536 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 001739 00000 ------------ C 0.98 0.70 0.84 T 0.02 0.30 0.16 0000 --- --- --- --- 001980 00000 ------------ T 0.55 0.72 0.64 A 0.45 0.28 0.36 0000 --- --- --- --- 002049 00049 5' UTR C 0.71 0.72 0.72 T 0.29 0.28 0.28 0000 --- --- --- --- 002212 00000 ------------ C 0.93 0.93 0.93 T 0.07 0.07 0.07 0000 --- --- --- --- 002219 00000 ------------ G 0.54 0.83 0.68 A 0.46 0.17 0.32 0000 --- --- --- --- 002277 00000 ------------ A 0.96 0.50 0.73 G 0.04 0.50 0.27 0000 --- --- --- --- 002347 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002370 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003032 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003076 00000 ------------ G 0.65 0.72 0.68 T 0.35 0.28 0.32 0000 --- --- --- --- 003131 00000 ------------ G 0.78 1.00 0.88 C 0.22 0.00 0.12 0000 --- --- --- --- 003173 00000 ------------ G 0.63 0.95 0.79 C 0.37 0.05 0.21 0000 --- --- --- --- 003211 00000 ------------ A 0.85 0.73 0.79 C 0.15 0.27 0.21 0000 --- --- --- --- 003301 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 004286 00000 ------------ T 0.96 0.93 0.94 C 0.04 0.07 0.06 0000 --- --- --- --- 004524 00000 ------------ C 0.77 0.81 0.79 A 0.23 0.19 0.21 0000 --- --- --- --- 004870 00000 ------------ - 0.38 0.05 0.22 + 0.62 0.95 0.78 0000 --- --- --- --- 005101 00000 ------------ T 0.54 0.72 0.63 C 0.46 0.28 0.37 0000 --- --- --- --- 005247 00000 ------------ T 0.92 0.85 0.88 C 0.08 0.15 0.12 0000 --- --- --- --- 005268 00000 ------------ A 0.54 0.72 0.63 G 0.46 0.28 0.37 0000 --- --- --- --- 005380 00000 ------------ G 0.67 0.80 0.73 A 0.33 0.20 0.27 0000 --- --- --- --- 005383 00000 ------------ T 0.54 0.74 0.64 C 0.46 0.26 0.36 0000 --- --- --- --- 005591 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 005922 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005986 00000 ------------ G 0.88 1.00 0.93 A 0.12 0.00 0.07 0000 --- --- --- --- 006256 00000 ------------ C 0.96 0.50 0.74 T 0.04 0.50 0.26 0000 --- --- --- --- 006508 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 008130 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008287 00000 ------------ A 0.79 0.74 0.77 G 0.21 0.26 0.23 0000 --- --- --- --- 008306 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008472 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 008532 00000 ------------ T 0.80 0.74 0.77 C 0.20 0.26 0.23 0000 --- --- --- --- 008654 00000 ------------ A 0.83 0.80 0.82 C 0.17 0.20 0.18 0000 --- --- --- --- 008780 00000 ------------ A 0.79 0.74 0.77 G 0.21 0.26 0.23 0000 --- --- --- --- 008998 00000 ------------ T 0.78 0.69 0.74 C 0.22 0.31 0.26 0000 --- --- --- --- 009046 00000 ------------ A 0.94 0.50 0.73 G 0.06 0.50 0.27 0000 --- --- --- --- 009154 00000 ------------ A 0.88 0.75 0.82 G 0.12 0.25 0.18 0000 --- --- --- --- 009186 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009356 00000 ------------ T 0.96 0.86 0.91 A 0.04 0.14 0.09 0000 --- --- --- --- 009631 00000 ------------ C 0.62 0.96 0.79 T 0.38 0.04 0.21 0000 --- --- --- --- 009661 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009803 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 010147 00000 ------------ T 0.96 0.50 0.73 A 0.04 0.50 0.27 0000 --- --- --- --- 010367 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 010444 00000 ------------ A 0.91 0.80 0.86 G 0.09 0.20 0.14 0000 --- --- --- --- 010803 00000 ------------ T 0.92 0.80 0.86 C 0.08 0.20 0.14 0000 --- --- --- --- 010832 00000 ------------ G 0.96 0.50 0.74 A 0.04 0.50 0.26 0000 --- --- --- --- 011164 00000 ------------ C 1.00 0.84 0.92 T 0.00 0.16 0.08 0000 --- --- --- --- 011283 00000 ------------ A 0.96 0.93 0.95 C 0.04 0.07 0.05 0000 --- --- --- --- 011428 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011959 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 012186* 012187 00000 ------------ G 0.90 0.76 0.84 A 0.10 0.24 0.16 0000 --- --- --- --- 012574 00000 ------------ A 0.83 0.97 0.90 G 0.17 0.03 0.10 0000 --- --- --- --- 013263 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 013727 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 014282 00000 ------------ A 0.83 0.95 0.90 G 0.17 0.05 0.10 0000 --- --- --- --- 014838 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 015565 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 016026 00000 ------------ T 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 016607 00000 ------------ A 0.96 0.93 0.95 T 0.04 0.07 0.05 0000 --- --- --- --- 016747 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 017223 00000 ------------ C 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 017257 00000 ------------ A 0.92 0.79 0.86 T 0.08 0.21 0.14 0000 --- --- --- --- 017296 00000 ------------ T 0.96 0.93 0.94 C 0.04 0.07 0.06 0000 --- --- --- --- 017406 00000 ------------ A 0.88 1.00 0.93 G 0.12 0.00 0.07 0000 --- --- --- --- 017426 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018047 00000 ------------ C 0.77 0.80 0.79 T 0.23 0.20 0.21 0000 --- --- --- --- 018305 00000 ------------ G 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 018633 00000 ------------ C 0.78 0.80 0.79 T 0.22 0.20 0.21 0000 --- --- --- --- 018799 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 019080 00794 SYNON C 0.98 1.00 0.99 A 0.02 0.00 0.01 0242 ATC ATA ILE(I) ILE(I) 019384 00000 ------------ G 0.95 0.92 0.94 C 0.05 0.08 0.06 0000 --- --- --- --- 019581 00000 ------------ A 0.75 0.76 0.76 G 0.25 0.24 0.24 0000 --- --- --- --- 020098 00000 ------------ - 0.23 0.20 0.22 + 0.77 0.80 0.78 0000 --- --- --- --- 020726 00000 ------------ - 0.02 0.09 0.06 + 0.98 0.91 0.94 0000 --- --- --- --- 021219 00000 ------------ A 0.60 0.95 0.77 G 0.40 0.05 0.23 0000 --- --- --- --- 021798 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 021929 00000 ------------ A 0.83 1.00 0.92 G 0.17 0.00 0.08 0000 --- --- --- --- 022603 00000 ------------ G 0.92 0.80 0.86 T 0.08 0.20 0.14 0000 --- --- --- --- 023327 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 023391 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023485 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 023502 00000 ------------ T 0.92 0.87 0.90 C 0.08 0.13 0.10 0000 --- --- --- --- 023697 00000 ------------ C 0.96 0.87 0.91 T 0.04 0.13 0.09 0000 --- --- --- --- 023816 00000 ------------ T 0.81 1.00 0.90 A 0.19 0.00 0.10 0000 --- --- --- --- 023916 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 024007 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 024416 01235 SYNON C 0.91 0.80 0.86 T 0.09 0.20 0.14 0389 GAC GAT ASP(D) ASP(D) 024655 00000 ------------ A 0.91 0.80 0.86 G 0.09 0.20 0.14 0000 --- --- --- --- 024727 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 024764 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 025713 00000 ------------ C 0.90 0.80 0.85 T 0.10 0.20 0.15 0000 --- --- --- --- 025742 00000 ------------ A 0.71 0.80 0.76 G 0.29 0.20 0.24 0000 --- --- --- --- 025791 00000 ------------ A 0.95 0.93 0.94 T 0.05 0.07 0.06 0000 --- --- --- --- 026050 00000 ------------ T 0.91 0.82 0.87 C 0.09 0.18 0.13 0000 --- --- --- --- 026298 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 026481 00000 ------------ T 0.71 0.81 0.76 C 0.29 0.19 0.24 0000 --- --- --- --- 026963 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 027026 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 027219 01323 SYNON C 0.83 1.00 0.91 T 0.17 0.00 0.09 0419 CTG TTG LEU(L) LEU(L) 027525 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 028112 00000 ------------ A 0.98 0.86 0.92 C 0.02 0.14 0.08 0000 --- --- --- --- 028301 00000 ------------ T 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 028506 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 029237 00000 ------------ C 0.96 0.50 0.73 T 0.04 0.50 0.27 0000 --- --- --- --- 029501 00000 ------------ T 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 029603 00000 ------------ C 0.96 0.50 0.73 T 0.04 0.50 0.27 0000 --- --- --- --- 029753 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 030099 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 030337 00000 ------------ G 0.90 0.37 0.64 A 0.10 0.63 0.36 0000 --- --- --- --- 030338 00000 ------------ C 0.92 0.80 0.86 T 0.08 0.20 0.14 0000 --- --- --- --- 030448 00000 ------------ T 0.81 1.00 0.90 C 0.19 0.00 0.10 0000 --- --- --- --- 030493 00000 ------------ A 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 030549 00000 ------------ - 0.96 0.87 0.91 + 0.04 0.13 0.09 0000 --- --- --- --- 030762 00000 ------------ C 0.38 0.76 0.56 T 0.62 0.24 0.44 0000 --- --- --- --- 031253 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 031826 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 032047 00000 ------------ G 0.92 0.80 0.86 A 0.08 0.20 0.14 0000 --- --- --- --- 032150 00000 ------------ C 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 032157 00000 ------------ A 0.35 0.70 0.55 C 0.65 0.30 0.45 0000 --- --- --- --- 032824 00000 ------------ G 0.93 0.93 0.93 A 0.07 0.07 0.07 0000 --- --- --- --- 032860 00000 ------------ C 0.90 1.00 0.96 T 0.10 0.00 0.04 0000 --- --- --- --- 033190 00000 ------------ G 0.96 0.93 0.95 A 0.04 0.07 0.05 0000 --- --- --- --- 033451 00000 ------------ C 0.96 0.50 0.75 T 0.04 0.50 0.25 0000 --- --- --- --- 033529 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 033554 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 033819 00000 ------------ C 0.96 0.86 0.91 T 0.04 0.14 0.09 0000 --- --- --- --- 033953 00000 ------------ C 0.98 0.95 0.97 A 0.02 0.05 0.03 0000 --- --- --- --- 034056 01544 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0492 CAC CAT HIS(H) HIS(H) 034257 00000 ------------ T 0.96 0.95 0.95 C 0.04 0.05 0.05 0000 --- --- --- --- 035148 00000 ------------ A 0.77 0.81 0.79 G 0.23 0.19 0.21 0000 --- --- --- --- 035163 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 035311 00000 ------------ T 0.96 0.48 0.73 C 0.04 0.52 0.27 0000 --- --- --- --- 035974 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 036079 00000 ------------ C 0.94 0.87 0.90 T 0.06 0.13 0.10 0000 --- --- --- --- 036234 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 036623 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 036661 00000 ------------ - 0.04 0.05 0.04 + 0.96 0.95 0.96 0000 --- --- --- --- 036728 00000 ------------ - 0.05 0.07 0.06 + 0.95 0.93 0.94 0000 --- --- --- --- 036798 00000 ------------ C 0.84 1.00 0.92 T 0.16 0.00 0.08 0000 --- --- --- --- 036868 00000 ------------ C 0.77 0.90 0.84 A 0.23 0.10 0.16 0000 --- --- --- --- 036998 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004870: C 020098: CATA 020726: CT 030549: TT 036661: CTC 036728: T The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 012186 A 0.98 0.97 0.97 G 0.00 0.03 0.01 T 0.02 0.00 0.01 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000225 00000 ------------ A 0.98 0.87 0.92 G 0.02 0.13 0.08 0000 --- --- --- --- 000589 00000 ------------ A 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 000696 00000 ------------ - 0.65 0.65 0.65 + 0.35 0.35 0.35 0000 --- --- --- --- 000732 00000 ------------ C 0.76 0.87 0.82 A 0.24 0.13 0.18 0000 --- --- --- --- 000772 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000914 00000 ------------ C 0.81 1.00 0.90 G 0.19 0.00 0.10 0000 --- --- --- --- 001181 00000 ------------ A 0.70 0.66 0.68 C 0.30 0.34 0.32 0000 --- --- --- --- 001435 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001442 00000 ------------ T 0.91 0.82 0.87 A 0.09 0.18 0.13 0000 --- --- --- --- 001502 00000 ------------ T 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 001518 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001665 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 002075 00000 ------------ A 0.98 0.89 0.93 G 0.02 0.11 0.07 0000 --- --- --- --- 002163 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002263 00000 ------------ - 0.96 0.80 0.88 + 0.04 0.20 0.12 0000 --- --- --- --- 002348 00000 ------------ A 0.91 0.83 0.87 G 0.09 0.17 0.13 0000 --- --- --- --- 002378 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002549 00000 ------------ G 0.92 0.83 0.87 A 0.08 0.17 0.13 0000 --- --- --- --- 002693 00000 ------------ A 0.98 0.87 0.92 T 0.02 0.13 0.08 0000 --- --- --- --- 003080 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003379 00000 ------------ G 0.90 0.83 0.86 A 0.10 0.17 0.14 0000 --- --- --- --- 003469 00000 ------------ G 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 003701 00000 ------------ A 0.62 0.70 0.66 G 0.38 0.30 0.34 0000 --- --- --- --- 003802 00000 ------------ G 0.88 0.83 0.85 A 0.12 0.17 0.15 0000 --- --- --- --- 004203 00000 ------------ G 0.76 0.43 0.59 A 0.24 0.57 0.41 0000 --- --- --- --- 004755 00000 ------------ A 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 004922 00000 ------------ C 0.71 0.87 0.79 T 0.29 0.13 0.21 0000 --- --- --- --- 004944 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004970 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 005022 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005054 00000 ------------ C 0.72 0.87 0.79 T 0.28 0.13 0.21 0000 --- --- --- --- 005127 00000 ------------ A 0.98 0.87 0.92 G 0.02 0.13 0.08 0000 --- --- --- --- 005222 00000 ------------ A 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 005252 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 005453 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 005673 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 005936 00236 SYNON G 0.98 0.98 0.98 T 0.02 0.02 0.02 0052 GTG GTT VAL(V) VAL(V) 005970 00270 NON-SYN G 0.81 0.87 0.84 A 0.19 0.13 0.16 0064 GTC ATC VAL(V) ILE(I) 008005 01097 SYNON A 0.91 1.00 0.96 G 0.09 0.00 0.04 0339 CCA CCG PRO(P) PRO(P) 008052 01144 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0355 GGA GAA GLY(G) GLU(E) 008503 01595 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010003 00000 ------------ G 0.98 0.87 0.92 A 0.02 0.13 0.08 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000696: CAA 002263: T Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000295 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 000331 00000 ------------ G 1.00 0.87 0.92 A 0.00 0.13 0.08 0000 --- --- --- --- 000463 00000 ------------ A 0.53 0.80 0.69 G 0.47 0.20 0.31 0000 --- --- --- --- 001086 00000 ------------ G 0.73 0.68 0.71 A 0.27 0.32 0.29 0000 --- --- --- --- 001132 00000 ------------ C 1.00 0.89 0.95 A 0.00 0.11 0.05 0000 --- --- --- --- 001591 00000 ------------ G 0.88 0.90 0.89 A 0.12 0.10 0.11 0000 --- --- --- --- 001781 00000 ------------ G 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 002034 00000 ------------ T 0.69 0.72 0.70 C 0.31 0.28 0.30 0000 --- --- --- --- 002149 00000 ------------ - 0.80 0.91 0.86 + 0.20 0.09 0.14 0000 --- --- --- --- 002221 00000 ------------ T 0.67 0.72 0.70 G 0.33 0.28 0.30 0000 --- --- --- --- 002368 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 002673 00000 ------------ T 0.65 0.72 0.68 C 0.35 0.28 0.32 0000 --- --- --- --- 002867 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 002939 00000 ------------ T 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 003012 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 003233 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003330 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003360 00000 ------------ G 0.92 0.80 0.86 T 0.08 0.20 0.14 0000 --- --- --- --- 003369 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003434 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 003676 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003852 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003894 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 003995 00000 ------------ T 0.88 1.00 0.93 C 0.12 0.00 0.07 0000 --- --- --- --- 004132 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006148 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006234 00000 ------------ - 0.79 0.67 0.73 + 0.21 0.33 0.27 0000 --- --- --- --- 006296 00000 ------------ G 0.69 1.00 0.84 T 0.31 0.00 0.16 0000 --- --- --- --- 006332 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 006353 00000 ------------ G 0.75 0.72 0.73 A 0.25 0.28 0.27 0000 --- --- --- --- 006923 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006958 00000 ------------ C 0.56 0.50 0.53 T 0.44 0.50 0.47 0000 --- --- --- --- 007154 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 007173 00000 ------------ G 0.67 0.74 0.70 A 0.33 0.26 0.30 0000 --- --- --- --- 007209 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 007270 00000 ------------ A 0.67 0.80 0.73 G 0.33 0.20 0.27 0000 --- --- --- --- 007323 00000 ------------ C 0.75 0.83 0.79 T 0.25 0.17 0.21 0000 --- --- --- --- 007395 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007428 00000 ------------ T 0.62 0.70 0.66 C 0.38 0.30 0.34 0000 --- --- --- --- 007429 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 007552 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 007559 00000 ------------ C 0.65 0.76 0.70 T 0.35 0.24 0.30 0000 --- --- --- --- 007574 00000 ------------ T 0.98 0.91 0.95 C 0.02 0.09 0.05 0000 --- --- --- --- 007729 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 007963 00363 SYNON C 0.95 1.00 0.98 T 0.05 0.00 0.02 0080 TGC TGT CYS(C) CYS(C) 008421 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 008528 00000 ------------ C 0.73 0.72 0.72 G 0.27 0.28 0.28 0000 --- --- --- --- 008641 00000 ------------ G 0.71 0.80 0.76 A 0.29 0.20 0.24 0000 --- --- --- --- 008678 00000 ------------ C 0.69 0.72 0.70 G 0.31 0.28 0.30 0000 --- --- --- --- 008814 00482 NON-SYN C 0.98 1.00 0.99 T 0.02 0.00 0.01 0120 ACG ATG THR(T) MET(M) 009139 00702 SYNON A 0.62 0.72 0.67 G 0.38 0.28 0.33 0193 GGA GGG GLY(G) GLY(G) 009214 00000 ------------ - 0.40 0.48 0.44 + 0.60 0.52 0.56 0000 --- --- --- --- 009329 00000 ------------ C 0.92 0.85 0.88 T 0.08 0.15 0.12 0000 --- --- --- --- 009428 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009470 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 009667 00000 ------------ T 0.62 0.72 0.67 C 0.38 0.28 0.33 0000 --- --- --- --- 009672 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 009779 00915 3' UTR C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 009976 01112 3' UTR G 0.66 0.72 0.69 A 0.34 0.28 0.31 0000 --- --- --- --- 009981 01117 3' UTR T 0.66 0.72 0.69 C 0.34 0.28 0.31 0000 --- --- --- --- 010099 01235 3' UTR T 0.65 0.72 0.68 C 0.35 0.28 0.32 0000 --- --- --- --- 010176 01312 3' UTR C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 010191 01327 3' UTR G 0.67 0.76 0.71 C 0.33 0.24 0.29 0000 --- --- --- --- 010229 01365 3' UTR C 0.81 0.91 0.86 T 0.19 0.09 0.14 0000 --- --- --- --- 010279 01415 3' UTR T 0.69 0.83 0.76 C 0.31 0.17 0.24 0000 --- --- --- --- 010317 01453 3' UTR A 0.62 0.72 0.67 T 0.38 0.28 0.33 0000 --- --- --- --- 010399 00000 ------------ G 0.46 0.59 0.52 C 0.54 0.41 0.48 0000 --- --- --- --- 010468 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010515 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 010583 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010635 00000 ------------ A 0.62 0.72 0.67 G 0.38 0.28 0.33 0000 --- --- --- --- 010650 00000 ------------ C 0.62 0.72 0.67 G 0.38 0.28 0.33 0000 --- --- --- --- 010684 00000 ------------ A 0.67 0.72 0.69 G 0.33 0.28 0.31 0000 --- --- --- --- 010712 00000 ------------ A 0.62 0.72 0.67 G 0.38 0.28 0.33 0000 --- --- --- --- 010743 00000 ------------ C 0.62 0.72 0.67 G 0.38 0.28 0.33 0000 --- --- --- --- 010926 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011089 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011186 00000 ------------ G 0.65 0.75 0.70 A 0.35 0.25 0.30 0000 --- --- --- --- 011312 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 011582 00000 ------------ A 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 011701 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 011740 00000 ------------ C 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 011783 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 011810 00000 ------------ G 0.98 0.91 0.95 C 0.02 0.09 0.05 0000 --- --- --- --- 011823 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 011827 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 011878 00000 ------------ T 0.62 0.72 0.67 C 0.38 0.28 0.33 0000 --- --- --- --- 011922 00000 ------------ C 0.59 0.41 0.50 T 0.41 0.59 0.50 0000 --- --- --- --- 012036 00000 ------------ G 0.70 0.74 0.72 A 0.30 0.26 0.28 0000 --- --- --- --- 012138 00000 ------------ - 0.71 0.72 0.72 + 0.29 0.28 0.28 0000 --- --- --- --- 012139 00000 ------------ C 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 012163 00000 ------------ G 0.70 0.71 0.70 C 0.30 0.29 0.30 0000 --- --- --- --- 012198 00000 ------------ A 0.70 0.74 0.72 T 0.30 0.26 0.28 0000 --- --- --- --- 012582 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012843 00000 ------------ G 0.92 0.85 0.88 C 0.08 0.15 0.12 0000 --- --- --- --- 013322 00000 ------------ C 0.75 0.79 0.77 G 0.25 0.21 0.23 0000 --- --- --- --- 013518 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 013958 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 014102 00000 ------------ G 0.62 0.72 0.67 C 0.38 0.28 0.33 0000 --- --- --- --- 014119 00000 ------------ - 0.93 1.00 0.97 + 0.07 0.00 0.03 0000 --- --- --- --- 014187 00000 ------------ C 0.65 0.72 0.68 T 0.35 0.28 0.32 0000 --- --- --- --- 014190 00000 ------------ T 0.63 0.72 0.67 C 0.37 0.28 0.33 0000 --- --- --- --- 014213 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014242 00000 ------------ G 0.62 0.72 0.67 A 0.38 0.28 0.33 0000 --- --- --- --- 014270 00000 ------------ - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 014300 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 014335 00000 ------------ G 0.71 0.80 0.76 A 0.29 0.20 0.24 0000 --- --- --- --- 014460 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 014491 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002149: GGTC 006234: CTG 007729: ACCCCC 009214: GGT 010515: A 012138: C 014119: C 014270: TGGGCCTGTGCGTCCCGGGGCTCC Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000106 00000 ------------ G 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 000757 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000861 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 001021 00000 ------------ T 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 001024 00000 ------------ A 0.82 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 001272 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 001547 00000 ------------ T 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 001848 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 002162 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 002273 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 002306 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 002387 00000 ------------ + 0.30 0.07 0.19 - 0.70 0.93 0.81 0000 --- --- --- --- 002521 00000 ------------ G 0.89 0.61 0.76 A 0.11 0.39 0.24 0000 --- --- --- --- 002638 00000 ------------ T 0.88 0.93 0.90 G 0.12 0.07 0.10 0000 --- --- --- --- 002652 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002890 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002996 00000 ------------ C 0.61 0.53 0.57 A 0.39 0.47 0.43 0000 --- --- --- --- 003094 00000 ------------ A 0.74 0.45 0.60 G 0.26 0.55 0.40 0000 --- --- --- --- 003157 00000 ------------ G 0.64 0.55 0.59 A 0.36 0.45 0.41 0000 --- --- --- --- 003304 00000 ------------ C 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 003342 00000 ------------ + 0.20 0.00 0.10 - 0.80 1.00 0.90 0000 --- --- --- --- 003412 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 003691 00000 ------------ G 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 003714 00000 ------------ + 0.96 1.00 0.98 - 0.04 0.00 0.02 0000 --- --- --- --- 003991 00000 ------------ A 0.89 0.55 0.72 C 0.11 0.45 0.28 0000 --- --- --- --- 004134 00000 ------------ T 0.67 0.95 0.81 G 0.33 0.05 0.19 0000 --- --- --- --- 004180 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004249 00000 ------------ C 0.83 0.93 0.88 T 0.17 0.07 0.12 0000 --- --- --- --- 004259 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004366 00000 ------------ A 0.85 0.54 0.70 T 0.15 0.46 0.30 0000 --- --- --- --- 004423 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004648 00000 ------------ C 0.72 0.54 0.63 A 0.28 0.46 0.37 0000 --- --- --- --- 004752 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004879 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004949 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004990 00000 ------------ C 0.71 0.93 0.82 T 0.29 0.07 0.18 0000 --- --- --- --- 004993 00000 ------------ A 0.60 0.52 0.56 G 0.40 0.48 0.44 0000 --- --- --- --- 005241 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006007 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007167 00000 ------------ G 0.67 0.48 0.57 A 0.33 0.52 0.43 0000 --- --- --- --- 007175 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 007265 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 007306 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 007430 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 007486 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 007662 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007663 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 007664 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 007854 00000 ------------ G 0.54 0.52 0.53 A 0.46 0.48 0.47 0000 --- --- --- --- 007947 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 007988 00000 ------------ A 0.71 0.93 0.82 C 0.29 0.07 0.18 0000 --- --- --- --- 008152 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 008426 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008583 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 008595 00000 ------------ T 0.79 1.00 0.90 A 0.21 0.00 0.10 0000 --- --- --- --- 008796 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 009152 00000 ------------ + 0.86 1.00 0.93 - 0.14 0.00 0.07 0000 --- --- --- --- 009473 00000 ------------ T 0.77 0.53 0.66 C 0.23 0.47 0.34 0000 --- --- --- --- 009474 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 009505 00000 ------------ T 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 009534 00000 ------------ C 0.62 0.48 0.56 T 0.38 0.52 0.44 0000 --- --- --- --- 009600 00000 ------------ A 0.39 0.93 0.65 G 0.61 0.07 0.35 0000 --- --- --- --- 009616 00000 ------------ T 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 009663 00000 ------------ G 1.00 0.92 0.96 A 0.00 0.08 0.04 0000 --- --- --- --- 010381 00000 ------------ T 0.71 0.93 0.82 C 0.29 0.07 0.18 0000 --- --- --- --- 010420 00286 FRAME SHIFT + 0.98 1.00 0.99 - 0.02 0.00 0.01 0052 AAA --A --- --- 010425 EXON14 -1 SPLICE + 0.02 0.00 0.01 - 0.98 1.00 0.99 0000 --- --- --- --- 010613 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010876 00000 ------------ A 0.96 0.95 0.96 G 0.04 0.05 0.04 0000 --- --- --- --- 011137 00000 ------------ + 0.91 1.00 0.95 - 0.09 0.00 0.05 0000 --- --- --- --- 011155 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 011472 00000 ------------ C 0.68 0.93 0.80 A 0.32 0.07 0.20 0000 --- --- --- --- 011554 00000 ------------ T 0.72 0.93 0.83 C 0.28 0.07 0.17 0000 --- --- --- --- 011684 00000 ------------ T 0.73 0.93 0.83 A 0.27 0.07 0.17 0000 --- --- --- --- 011741 00000 ------------ C 0.52 0.48 0.50 T 0.48 0.52 0.50 0000 --- --- --- --- 011890 00000 ------------ A 0.94 0.57 0.76 G 0.06 0.43 0.24 0000 --- --- --- --- 012124 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 012145 00000 ------------ G 0.74 0.80 0.77 A 0.26 0.20 0.23 0000 --- --- --- --- 012269 00000 ------------ + 0.92 0.53 0.77 - 0.08 0.47 0.23 0000 --- --- --- --- 012403 00000 ------------ C 0.69 0.93 0.81 G 0.31 0.07 0.19 0000 --- --- --- --- 012775 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 012919 00000 ------------ A 0.57 0.55 0.56 G 0.43 0.45 0.44 0000 --- --- --- --- 012998 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 013094 00000 ------------ T 0.96 0.95 0.96 A 0.04 0.05 0.04 0000 --- --- --- --- 013346 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 013388 00000 ------------ A 0.96 0.95 0.95 G 0.04 0.05 0.05 0000 --- --- --- --- 013528 00000 ------------ + 0.92 0.50 0.74 - 0.08 0.50 0.26 0000 --- --- --- --- 013577 00000 ------------ T 0.33 0.95 0.60 A 0.67 0.05 0.40 0000 --- --- --- --- 013758 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 013823 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 013936 00000 ------------ C 0.60 0.43 0.51 T 0.40 0.57 0.49 0000 --- --- --- --- 013973 00000 ------------ G 0.93 0.50 0.71 A 0.07 0.50 0.29 0000 --- --- --- --- 014003 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 014076 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 014081 00000 ------------ C 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 014190 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014299 00000 ------------ A 0.73 0.93 0.83 G 0.27 0.07 0.17 0000 --- --- --- --- 014455 00000 ------------ A 0.92 0.52 0.73 T 0.08 0.48 0.27 0000 --- --- --- --- 014482 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014882 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 014903 00000 ------------ G 0.76 1.00 0.88 A 0.24 0.00 0.12 0000 --- --- --- --- 015062 EXON14 +2 SPLICE T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 015521 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 015833 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 015932 00000 ------------ G 0.71 0.93 0.82 A 0.29 0.07 0.18 0000 --- --- --- --- 015975 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 016040 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 016163 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016385 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 016565 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016568 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 016809 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016838 EXON14 -2 SPLICE A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016983 00705 SYNON G 1.00 0.95 0.98 A 0.00 0.05 0.02 0191 CCG CCA PRO(P) PRO(P) 017093 00000 ------------ T 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 017282 00000 ------------ T 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 017418 00000 ------------ + 0.89 1.00 0.95 - 0.11 0.00 0.05 0000 --- --- --- --- 017461 00000 ------------ + 0.04 0.00 0.03 - 0.96 1.00 0.97 0000 --- --- --- --- 017743 00000 ------------ A 0.87 1.00 0.94 G 0.13 0.00 0.06 0000 --- --- --- --- 017800 00000 ------------ + 0.13 0.00 0.06 - 0.87 1.00 0.94 0000 --- --- --- --- 018358 00000 ------------ + 0.04 0.00 0.02 - 0.96 1.00 0.98 0000 --- --- --- --- 018457 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 018463 00000 ------------ C 0.98 0.95 0.97 T 0.02 0.05 0.03 0000 --- --- --- --- 018662 00000 ------------ T 0.77 1.00 0.89 C 0.23 0.00 0.11 0000 --- --- --- --- 018785 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 018911 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018966 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 019151 00000 ------------ A 0.70 1.00 0.82 G 0.30 0.00 0.18 0000 --- --- --- --- 019228 00000 ------------ A 0.96 0.94 0.95 C 0.04 0.06 0.05 0000 --- --- --- --- 019277 00000 ------------ + 0.02 0.36 0.18 - 0.98 0.64 0.82 0000 --- --- --- --- 019386 00000 ------------ T 0.88 1.00 0.93 C 0.12 0.00 0.07 0000 --- --- --- --- 019877 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 020028 00000 ------------ + 0.91 1.00 0.95 - 0.09 0.00 0.05 0000 --- --- --- --- 020277 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 020440 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020630 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 020644 00000 ------------ T 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 021005 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 021110 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021111 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 021703 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021731 00000 ------------ + 0.06 0.02 0.04 - 0.94 0.98 0.96 0000 --- --- --- --- 021891 00000 ------------ G 0.95 0.98 0.97 A 0.05 0.02 0.03 0000 --- --- --- --- 021927 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 022296 00000 ------------ C 0.79 0.55 0.68 G 0.21 0.45 0.32 0000 --- --- --- --- 022338 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 022351 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 022434 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 022749 00000 ------------ C 0.78 0.54 0.66 T 0.22 0.46 0.34 0000 --- --- --- --- 022830 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 023463 00000 ------------ T 0.81 0.50 0.65 C 0.19 0.50 0.35 0000 --- --- --- --- 023533 00000 ------------ G 0.88 0.50 0.70 A 0.12 0.50 0.30 0000 --- --- --- --- 023689 00000 ------------ G 0.79 0.54 0.67 A 0.21 0.46 0.33 0000 --- --- --- --- 024165 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 024166 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 024186 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 024426 00000 ------------ T 0.79 0.52 0.66 A 0.21 0.48 0.34 0000 --- --- --- --- 024427 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024685 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 025025 01104 TRUNCATION T 0.92 1.00 0.96 G 0.08 0.00 0.04 0324 TAT TAG TYR(Y) *** 025054 01133 FRAME SHIFT + 1.00 0.98 0.99 - 0.00 0.02 0.01 0334 GAA G-- --- --- 025276 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 025550 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 025580 00000 ------------ T 0.89 0.50 0.69 C 0.11 0.50 0.31 0000 --- --- --- --- 025695 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 025794 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 025945 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 026076 00000 ------------ G 0.96 0.91 0.94 A 0.04 0.09 0.06 0000 --- --- --- --- 026089 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 026160 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 026305 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 026346 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 026512 00000 ------------ C 0.75 0.60 0.68 A 0.25 0.40 0.32 0000 --- --- --- --- 026776 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 026911 00000 ------------ + 0.02 0.00 0.01 - 0.98 1.00 0.99 0000 --- --- --- --- 026927 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 027003 00000 ------------ C 0.83 0.54 0.69 T 0.17 0.46 0.31 0000 --- --- --- --- 027041 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 027418 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 028302 01774 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 028314 01786 3' UTR + 1.00 0.89 0.94 - 0.00 0.11 0.06 0000 --- --- --- --- 028375 00000 ------------ T 0.96 0.91 0.94 G 0.04 0.09 0.06 0000 --- --- --- --- 028423 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028685 00000 ------------ A 0.87 0.52 0.70 G 0.13 0.48 0.30 0000 --- --- --- --- 028947 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 029225 00000 ------------ A 0.88 0.52 0.70 G 0.12 0.48 0.30 0000 --- --- --- --- 029894 00000 ------------ + 0.18 0.45 0.31 - 0.82 0.55 0.69 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002387: T 003342: A 003714: AA 009152: C 010420: AA 010425: G 011137: G 012269: GTT 013528: TGT 017418: TTACAATTTTAAT 017461: T 017800: TACTCAT 018358: TAAG 019277: TCAAACTGAGTCTATCTAATGATTGCTTT 020028: A 021731: GCCT 025054: AAG 026911: ATGGTTTTATGGTTTTATTTGAGCATTTGATAGCATC 028314: GCACAAATAAAGCACT 029894: GGGTTGAGA Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000644 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 000887 00000 ------------ C 0.60 0.93 0.78 T 0.40 0.07 0.22 0000 --- --- --- --- 000914 00000 ------------ G 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 000922 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 000943 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 000950 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 003428 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003524 00000 ------------ C 0.74 0.70 0.72 T 0.26 0.30 0.28 0000 --- --- --- --- 003596 00000 ------------ A 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 004125 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004265 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004679 00000 ------------ T 0.65 0.93 0.80 C 0.35 0.07 0.20 0000 --- --- --- --- 005027 00000 ------------ G 0.71 0.69 0.70 A 0.29 0.31 0.30 0000 --- --- --- --- 005625 00000 ------------ C 0.85 0.74 0.79 T 0.15 0.26 0.21 0000 --- --- --- --- 005723 00000 ------------ G 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 005775 00000 ------------ G 0.95 0.39 0.66 A 0.05 0.61 0.34 0000 --- --- --- --- 005812 00000 ------------ A 0.86 1.00 0.93 C 0.14 0.00 0.07 0000 --- --- --- --- 005829 00000 ------------ A 0.70 0.67 0.69 G 0.30 0.33 0.31 0000 --- --- --- --- 006048 00000 ------------ T 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 006295 00000 ------------ G 0.61 1.00 0.80 A 0.39 0.00 0.20 0000 --- --- --- --- 006409 00000 ------------ T 0.94 0.39 0.67 C 0.06 0.61 0.33 0000 --- --- --- --- 006607 00000 ------------ C 0.95 0.39 0.57 T 0.05 0.61 0.43 0000 --- --- --- --- 007543 00000 ------------ C 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 009355 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 009372 00000 ------------ C 0.75 0.67 0.71 T 0.25 0.33 0.29 0000 --- --- --- --- 009678 00000 ------------ T 0.35 0.93 0.64 C 0.65 0.07 0.36 0000 --- --- --- --- 009836 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 010633 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010993 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011674 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 011687 00000 ------------ - 0.73 0.67 0.70 + 0.27 0.33 0.30 0000 --- --- --- --- 012000 00000 ------------ C 0.76 1.00 0.88 G 0.24 0.00 0.12 0000 --- --- --- --- 012111 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 012204 00000 ------------ G 0.73 0.69 0.71 A 0.27 0.31 0.29 0000 --- --- --- --- 012458 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012753 00000 ------------ C 0.65 0.72 0.68 T 0.35 0.28 0.32 0000 --- --- --- --- 012759 00000 ------------ A 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 013121 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 013183 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014229 00000 ------------ C 0.71 0.68 0.70 G 0.29 0.32 0.30 0000 --- --- --- --- 014682 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 014868 00000 ------------ A 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 015184 00000 ------------ C 0.90 0.41 0.66 T 0.10 0.59 0.34 0000 --- --- --- --- 015223 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 015536 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 015568 00000 ------------ C 0.82 1.00 0.91 A 0.18 0.00 0.09 0000 --- --- --- --- 015667 00000 ------------ T 0.80 0.93 0.87 A 0.20 0.07 0.13 0000 --- --- --- --- 017328 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 017338 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 017395 00000 ------------ A 0.76 0.93 0.85 G 0.24 0.07 0.15 0000 --- --- --- --- 018055 00000 ------------ T 0.80 0.92 0.85 C 0.20 0.08 0.15 0000 --- --- --- --- 018281 00000 ------------ G 0.69 0.56 0.63 C 0.31 0.44 0.37 0000 --- --- --- --- 018531 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 018994 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 019171 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019375 00000 ------------ G 0.81 0.43 0.62 A 0.19 0.57 0.38 0000 --- --- --- --- 019405 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019616 00000 ------------ T 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 019700 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 019705 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 019804 00000 ------------ A 1.00 0.94 0.97 G 0.00 0.06 0.03 0000 --- --- --- --- 020356 00000 ------------ C 0.81 0.43 0.61 T 0.19 0.57 0.39 0000 --- --- --- --- 020480 00000 ------------ T 0.98 0.96 0.97 C 0.02 0.04 0.03 0000 --- --- --- --- 020687 00000 ------------ C 0.66 0.57 0.61 T 0.34 0.43 0.39 0000 --- --- --- --- 020699 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 021245 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021615 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 021983 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 022162 00000 ------------ T 0.82 1.00 0.92 C 0.18 0.00 0.08 0000 --- --- --- --- 022967 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 022979 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 023854 00000 ------------ C 1.00 0.93 0.96 T 0.00 0.07 0.04 0000 --- --- --- --- 023856 00000 ------------ A 1.00 0.93 0.96 T 0.00 0.07 0.04 0000 --- --- --- --- 023888 00000 ------------ T 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 023948 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 024058 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 024121 00000 ------------ - 0.18 0.00 0.09 + 0.82 1.00 0.91 0000 --- --- --- --- 024311 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 024550 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 024565 00000 ------------ C 0.80 1.00 0.90 G 0.20 0.00 0.10 0000 --- --- --- --- 024677 00000 ------------ G 0.64 0.54 0.59 C 0.36 0.46 0.41 0000 --- --- --- --- 025097 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 025131 00000 ------------ - 0.11 0.00 0.06 + 0.89 1.00 0.94 0000 --- --- --- --- 025205 00000 ------------ G 0.93 0.52 0.72 A 0.07 0.48 0.28 0000 --- --- --- --- 025221 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025254 00000 ------------ G 0.88 1.00 0.95 A 0.12 0.00 0.05 0000 --- --- --- --- 025277 00000 ------------ G 0.57 0.48 0.51 A 0.43 0.52 0.49 0000 --- --- --- --- 025293 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 025403 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 025572 00000 ------------ C 0.78 1.00 0.90 T 0.22 0.00 0.10 0000 --- --- --- --- 026079 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 026238 00000 ------------ C 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 026741 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 027252 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 028166 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 028266 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 028274 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 028351 00000 ------------ A 0.81 1.00 0.90 G 0.19 0.00 0.10 0000 --- --- --- --- 028919 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 028920 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 029408 00000 ------------ C 1.00 0.93 0.96 T 0.00 0.07 0.04 0000 --- --- --- --- 029547 00000 ------------ G 0.86 1.00 0.93 C 0.14 0.00 0.07 0000 --- --- --- --- 029621 00000 ------------ G 0.65 0.54 0.60 T 0.35 0.46 0.40 0000 --- --- --- --- 029654 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 029761 00000 ------------ A 0.84 1.00 0.93 G 0.16 0.00 0.07 0000 --- --- --- --- 029797 00000 ------------ - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 029798 00000 ------------ A 0.83 1.00 0.93 C 0.17 0.00 0.07 0000 --- --- --- --- 030242 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 030291 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 030341 00000 ------------ G 0.79 0.47 0.65 A 0.21 0.53 0.35 0000 --- --- --- --- 030359 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 031004 00000 ------------ T 0.81 0.48 0.65 C 0.19 0.52 0.35 0000 --- --- --- --- 031033 00000 ------------ C 0.81 1.00 0.90 G 0.19 0.00 0.10 0000 --- --- --- --- 031250 00000 ------------ - 0.91 1.00 0.96 + 0.09 0.00 0.04 0000 --- --- --- --- 031260 00000 ------------ G 0.82 1.00 0.92 C 0.18 0.00 0.08 0000 --- --- --- --- 031499 00000 ------------ G 0.81 1.00 0.90 A 0.19 0.00 0.10 0000 --- --- --- --- 032226 00000 ------------ C 0.83 0.48 0.67 T 0.17 0.52 0.33 0000 --- --- --- --- 032233 00000 ------------ G 0.96 0.74 0.86 A 0.04 0.26 0.14 0000 --- --- --- --- 032463 00000 ------------ T 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 032758 00000 ------------ T 0.65 0.57 0.61 C 0.35 0.43 0.39 0000 --- --- --- --- 033437 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 033568 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 033682 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 033869 00000 ------------ A 0.74 0.45 0.59 G 0.26 0.55 0.41 0000 --- --- --- --- 034138 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 034438 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 034611 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 034647 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 035291 00000 ------------ G 0.67 0.57 0.62 T 0.33 0.43 0.38 0000 --- --- --- --- 035426 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 035493 00000 ------------ C 0.75 0.95 0.84 T 0.25 0.05 0.16 0000 --- --- --- --- 035911 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 036544 00000 ------------ G 0.91 0.50 0.72 A 0.09 0.50 0.28 0000 --- --- --- --- 036549 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 036756 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 036871 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 037194 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 037195 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 037450 00000 ------------ A 0.87 0.46 0.66 G 0.13 0.54 0.34 0000 --- --- --- --- 037513 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 037569 00000 ------------ C 0.54 0.54 0.54 T 0.46 0.46 0.46 0000 --- --- --- --- 037617 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 037644 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 038126 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 038154 00000 ------------ C 0.60 0.55 0.58 A 0.40 0.45 0.42 0000 --- --- --- --- 038219 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 038343 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 038367 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 038442 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 038757 00000 ------------ C 0.71 0.48 0.60 T 0.29 0.52 0.40 0000 --- --- --- --- 038848 00000 ------------ C 0.86 0.46 0.66 T 0.14 0.54 0.34 0000 --- --- --- --- 038850 00000 ------------ T 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 039236 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 039257 00000 ------------ G 0.79 1.00 0.89 C 0.21 0.00 0.11 0000 --- --- --- --- 040239 00000 ------------ - 0.35 0.52 0.43 + 0.65 0.48 0.57 0000 --- --- --- --- 040265 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 040309* 040512 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 040517 00000 ------------ G 0.67 0.48 0.58 A 0.33 0.52 0.42 0000 --- --- --- --- 040721 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 040932 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 040971 00000 ------------ C 0.88 0.48 0.68 T 0.12 0.52 0.32 0000 --- --- --- --- 041230 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 011687: TCT 024121: GA 025131: G 029797: C 031250: CTC 033682: A 038367: C 040239: G The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 040309 C 0.76 1.00 0.88 G 0.02 0.00 0.01 T 0.22 0.00 0.11 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000040 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000220 00000 ------------ A 0.77 0.98 0.87 G 0.23 0.02 0.13 0000 --- --- --- --- 000586 00000 ------------ G 0.93 0.61 0.76 T 0.07 0.39 0.24 0000 --- --- --- --- 000587 00000 ------------ C 0.92 0.59 0.74 T 0.08 0.41 0.26 0000 --- --- --- --- 001643 -----** SYNON C 0.83 0.54 0.69 T 0.17 0.46 0.31 0147 GCC GCT ALA(A) ALA(A) 001785 -----** NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0195 GGC AGC GLY(G) SER(S) 002876 00000 ------------ A 0.52 0.96 0.73 T 0.48 0.04 0.27 0000 --- --- --- --- 002884 00000 ------------ - 0.52 0.96 0.73 + 0.48 0.04 0.27 0000 --- --- --- --- 002948 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003077 00000 ------------ - 1.00 0.91 0.96 + 0.00 0.09 0.04 0000 --- --- --- --- 003259 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 003693 00000 ------------ C 0.50 0.96 0.72 T 0.50 0.04 0.28 0000 --- --- --- --- 004446 00000 ------------ T 0.50 0.96 0.72 C 0.50 0.04 0.28 0000 --- --- --- --- 004962 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 005010 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- ** Sites are not mapped to the complete CDNA. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002884: T 003077: G Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000251 00000 ------------ A 0.79 1.00 0.90 T 0.21 0.00 0.10 0000 --- --- --- --- 000957 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 001029 00000 ------------ A 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 001225 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 001475 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 001501 00000 ------------ A 0.71 1.00 0.85 G 0.29 0.00 0.15 0000 --- --- --- --- 001555 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001738 00000 ------------ - 0.06 0.00 0.03 + 0.94 1.00 0.97 0000 --- --- --- --- 001783 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 001866 00000 ------------ G 0.94 0.91 0.93 A 0.06 0.09 0.07 0000 --- --- --- --- 001888 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 001927 00000 ------------ C 0.70 1.00 0.83 A 0.30 0.00 0.17 0000 --- --- --- --- 002359 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 002999 00000 ------------ T 0.77 1.00 0.88 C 0.23 0.00 0.12 0000 --- --- --- --- 003029 00000 ------------ - 0.77 1.00 0.88 + 0.23 0.00 0.12 0000 --- --- --- --- 003097 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003434 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 003479 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 003743 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 003912 00000 ------------ A 0.96 0.48 0.72 G 0.04 0.52 0.28 0000 --- --- --- --- 003975 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004211 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 004319 00000 ------------ G 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 004324 00000 ------------ A 0.50 0.91 0.70 C 0.50 0.09 0.30 0000 --- --- --- --- 004346 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004759 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005190 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005323 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 005428 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 005744 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 006165 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006174 00000 ------------ C 0.96 0.93 0.94 T 0.04 0.07 0.06 0000 --- --- --- --- 006292 00000 ------------ G 0.50 0.93 0.70 A 0.50 0.07 0.30 0000 --- --- --- --- 006393 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 007206 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 007966 00000 ------------ C 0.94 0.45 0.71 T 0.06 0.55 0.29 0000 --- --- --- --- 008542 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 008882 00000 ------------ A 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 009320 00000 ------------ T 0.79 1.00 0.89 C 0.21 0.00 0.11 0000 --- --- --- --- 009363 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009700 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009783 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010226 00000 ------------ G 0.93 0.45 0.70 A 0.07 0.55 0.30 0000 --- --- --- --- 010465 00000 ------------ G 0.93 0.90 0.92 T 0.07 0.10 0.08 0000 --- --- --- --- 010643 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010657 00000 ------------ G 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 010672 00000 ------------ T 0.79 1.00 0.89 G 0.21 0.00 0.11 0000 --- --- --- --- 010791 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 010808 00000 ------------ - 0.44 0.91 0.66 + 0.56 0.09 0.34 0000 --- --- --- --- 010886 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010921 00000 ------------ C 0.88 1.00 0.93 T 0.12 0.00 0.07 0000 --- --- --- --- 011068 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011244 00000 ------------ - 0.06 0.10 0.08 + 0.94 0.90 0.92 0000 --- --- --- --- 011314 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011459 00000 ------------ A 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 011898 00000 ------------ A 1.00 0.90 0.95 G 0.00 0.10 0.05 0000 --- --- --- --- 011962 00000 ------------ A 1.00 0.90 0.95 G 0.00 0.10 0.05 0000 --- --- --- --- 012127 00000 ------------ A 0.76 1.00 0.88 G 0.24 0.00 0.12 0000 --- --- --- --- 012184 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 012538 00699 SYNON T 0.98 1.00 0.99 C 0.02 0.00 0.01 0204 TAT TAC TYR(Y) TYR(Y) 012694 00000 ------------ T 0.79 1.00 0.89 G 0.21 0.00 0.11 0000 --- --- --- --- 013009 00000 ------------ C 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 013179 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 013497 00889 NON-SYN A 0.68 0.61 0.65 G 0.32 0.39 0.35 0268 ATA GTA ILE(I) VAL(V) 014018 00000 ------------ G 0.94 0.91 0.93 A 0.06 0.09 0.07 0000 --- --- --- --- 014635 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 014883 00000 ------------ C 0.94 0.45 0.71 G 0.06 0.55 0.29 0000 --- --- --- --- 014972 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 015239 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015498 00000 ------------ C 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 015762 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015958 00000 ------------ T 0.77 1.00 0.88 C 0.23 0.00 0.12 0000 --- --- --- --- 015994 00000 ------------ C 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 016008 00000 ------------ C 0.94 0.91 0.93 T 0.06 0.09 0.07 0000 --- --- --- --- 016979 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 019006 00000 ------------ G 0.62 0.61 0.62 A 0.38 0.39 0.38 0000 --- --- --- --- 019096 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 019912 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 019992 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020381 00000 ------------ - 0.21 0.00 0.11 + 0.79 1.00 0.89 0000 --- --- --- --- 020387 00000 ------------ C 0.65 0.61 0.63 T 0.35 0.39 0.37 0000 --- --- --- --- 020454 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 020563 00000 ------------ C 0.77 1.00 0.88 T 0.23 0.00 0.12 0000 --- --- --- --- 021350 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 021573 00000 ------------ C 0.93 0.91 0.92 T 0.07 0.09 0.08 0000 --- --- --- --- 021711 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 021734 00000 ------------ G 0.78 1.00 0.89 T 0.22 0.00 0.11 0000 --- --- --- --- 022391 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 022395 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 022427 00000 ------------ A 0.90 1.00 0.94 G 0.10 0.00 0.06 0000 --- --- --- --- 022981 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 022985 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 023010 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 023146 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023147 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 023463 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 023758 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 023889 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 023975 00000 ------------ C 0.96 0.48 0.72 T 0.04 0.52 0.28 0000 --- --- --- --- 023992 00000 ------------ C 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 024173 00000 ------------ C 0.71 0.64 0.68 G 0.29 0.36 0.32 0000 --- --- --- --- 024561 00000 ------------ G 0.96 0.91 0.93 A 0.04 0.09 0.07 0000 --- --- --- --- 024616 00000 ------------ - 0.23 0.00 0.11 + 0.77 1.00 0.89 0000 --- --- --- --- 024895 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 025424 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 025434 00000 ------------ T 0.77 1.00 0.89 A 0.23 0.00 0.11 0000 --- --- --- --- 025720 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 025785 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 025827 00000 ------------ T 0.44 0.91 0.66 C 0.56 0.09 0.34 0000 --- --- --- --- 026227 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 026632 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 026849 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 026904 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 027073 01545 SYNON C 0.98 0.89 0.93 T 0.02 0.11 0.07 0486 AGC AGT SER(S) SER(S) 027591 00000 ------------ T 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 027667 00000 ------------ G 0.94 0.91 0.92 A 0.06 0.09 0.08 0000 --- --- --- --- 027707 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 027840 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 028086 00000 ------------ A 0.61 0.64 0.62 C 0.39 0.36 0.38 0000 --- --- --- --- 028134 00000 ------------ A 0.80 1.00 0.90 G 0.20 0.00 0.10 0000 --- --- --- --- 028699 00000 ------------ T 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 028715 00000 ------------ A 0.77 1.00 0.88 G 0.23 0.00 0.12 0000 --- --- --- --- 028856 00000 ------------ T 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 029161 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 029173 00000 ------------ A 0.77 1.00 0.88 G 0.23 0.00 0.12 0000 --- --- --- --- 029995* 030214 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 030419 00000 ------------ A 0.69 0.61 0.65 G 0.31 0.39 0.35 0000 --- --- --- --- 031243 00000 ------------ C 0.93 0.93 0.93 T 0.07 0.07 0.07 0000 --- --- --- --- 031749 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 032152 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 032345 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 032527 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 032588 00000 ------------ T 0.94 0.91 0.92 C 0.06 0.09 0.08 0000 --- --- --- --- 032615 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 032770 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 032818 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 032897 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 033153 00000 ------------ A 0.77 1.00 0.88 G 0.23 0.00 0.12 0000 --- --- --- --- 033252 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 033460 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 033708 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 033722 00000 ------------ - 0.00 0.05 0.02 + 1.00 0.95 0.98 0000 --- --- --- --- 034363 00000 ------------ T 0.78 1.00 0.89 C 0.22 0.00 0.11 0000 --- --- --- --- 034389 00000 ------------ G 0.93 0.91 0.92 A 0.07 0.09 0.08 0000 --- --- --- --- 034399 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 035486* 035773 00000 ------------ C 0.43 0.90 0.66 T 0.57 0.10 0.34 0000 --- --- --- --- 035827 00000 ------------ - 0.06 0.00 0.03 + 0.94 1.00 0.97 0000 --- --- --- --- 036137 00000 ------------ G 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 036184 00000 ------------ A 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 036383 00000 ------------ T 0.50 0.90 0.69 A 0.50 0.10 0.31 0000 --- --- --- --- 037038 00000 ------------ G 0.93 0.91 0.92 A 0.07 0.09 0.08 0000 --- --- --- --- 037050 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 037680 00000 ------------ T 0.95 0.45 0.70 G 0.05 0.55 0.30 0000 --- --- --- --- 038718 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 038983 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 039399 00000 ------------ A 0.96 0.91 0.93 G 0.04 0.09 0.07 0000 --- --- --- --- 039987 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 041000 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 041277 00000 ------------ C 0.50 0.91 0.71 T 0.50 0.09 0.29 0000 --- --- --- --- 041954 00000 ------------ A 0.80 1.00 0.90 C 0.20 0.00 0.10 0000 --- --- --- --- 042399 02694 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 042698 02993 3' UTR - 0.00 0.04 0.02 + 1.00 0.96 0.98 0000 --- --- --- --- 043648 00000 ------------ G 0.45 0.93 0.69 A 0.55 0.07 0.31 0000 --- --- --- --- 044940 00000 ------------ G 0.78 1.00 0.89 A 0.23 0.00 0.11 0000 --- --- --- --- 044953 00000 ------------ T 0.95 0.93 0.94 C 0.05 0.07 0.06 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001225: AG 001738: A 003029: TCC 004211: T 010808: T 011244: C 016979: CT 020381: A 023758: T 023889: A 024616: T 026632: T 026904: TTG 032770: A 033722: CTCA 035827: CTTT 042698: TATTT The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 029995 A 0.85 1.00 0.93 G 0.04 0.00 0.02 T 0.10 0.00 0.05 035486 A 0.91 0.89 0.90 C 0.02 0.00 0.01 G 0.07 0.11 0.09 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000141 00000 ------------ A 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 000148 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 000381 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 000449 00000 ------------ T 0.73 1.00 0.87 A 0.27 0.00 0.13 0000 --- --- --- --- 000891 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 000999 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 001272 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001850 00000 ------------ C 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 002270 00138 5' UTR T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002420 00000 ------------ G 0.67 1.00 0.84 A 0.33 0.00 0.16 0000 --- --- --- --- 002741 00000 ------------ - 0.36 0.93 0.65 + 0.64 0.07 0.35 0000 --- --- --- --- 003010 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 003784 00000 ------------ T 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 003800 00000 ------------ T 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 004094 00000 ------------ - 1.00 0.95 0.98 + 0.00 0.05 0.02 0000 --- --- --- --- 004374 00000 ------------ A 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 004443 00000 ------------ C 0.83 0.66 0.74 T 0.17 0.34 0.26 0000 --- --- --- --- 004514 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 004858 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 005113 00000 ------------ T 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 005513 00000 ------------ G 0.96 0.76 0.87 A 0.04 0.24 0.13 0000 --- --- --- --- 006245 00000 ------------ T 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 006556 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006638 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 006982 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 007403 00000 ------------ A 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 008542 00000 ------------ T 0.76 0.97 0.86 G 0.24 0.03 0.14 0000 --- --- --- --- 008553 00000 ------------ G 0.74 0.97 0.85 A 0.26 0.03 0.15 0000 --- --- --- --- 008741 00000 ------------ G 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 009239 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009466 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 009512 00000 ------------ - 0.09 0.00 0.05 + 0.91 1.00 0.95 0000 --- --- --- --- 010856 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011516 00000 ------------ G 0.37 0.91 0.64 A 0.63 0.09 0.36 0000 --- --- --- --- 011665 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011914 00000 ------------ C 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 012317 00000 ------------ C 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 012490 00000 ------------ G 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 012610 00000 ------------ - 0.72 0.86 0.79 + 0.28 0.14 0.21 0000 --- --- --- --- 012818 00000 ------------ G 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 013355 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013408 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013678 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 013788 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014085 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 014186 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 014198 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 014258 00000 ------------ A 0.36 0.90 0.63 C 0.64 0.10 0.37 0000 --- --- --- --- 014605 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014614 00000 ------------ - 0.78 1.00 0.89 + 0.22 0.00 0.11 0000 --- --- --- --- 015149 00000 ------------ C 0.78 1.00 0.89 T 0.22 0.00 0.11 0000 --- --- --- --- 015386 00000 ------------ G 0.89 0.88 0.88 A 0.11 0.12 0.12 0000 --- --- --- --- 015449 00000 ------------ T 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 015467 00483 SYNON G 1.00 0.98 0.99 A 0.00 0.02 0.01 0112 GTG GTA VAL(V) VAL(V) 015638 00654 3' UTR T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 015971 00000 ------------ G 0.76 1.00 0.88 A 0.24 0.00 0.12 0000 --- --- --- --- 016120 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016155 00000 ------------ G 0.43 0.93 0.69 A 0.57 0.07 0.31 0000 --- --- --- --- 016749 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000148: T 002741: CAAAAACAAAA 004094: A 006638: T 009512: T 012610: T 014614: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000209 00000 ------------ - 1.00 0.96 0.98 + 0.00 0.04 0.02 0000 --- --- --- --- 000275 00000 ------------ C 0.93 0.79 0.86 G 0.07 0.21 0.14 0000 --- --- --- --- 000363 00000 ------------ C 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 000757 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 000944 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 000990 00000 ------------ C 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 002190 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 002312 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 002512 00000 ------------ A 0.75 0.39 0.58 T 0.25 0.61 0.42 0000 --- --- --- --- 002658 00000 ------------ C 0.63 0.39 0.52 G 0.37 0.61 0.48 0000 --- --- --- --- 002724 00000 ------------ T 0.96 0.72 0.85 A 0.04 0.28 0.15 0000 --- --- --- --- 002955 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 003118 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 003247 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 003543 00000 ------------ T 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 003657 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003871 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 003920 00000 ------------ C 0.38 0.68 0.53 T 0.62 0.32 0.47 0000 --- --- --- --- 003934 00000 ------------ C 0.40 0.89 0.66 T 0.60 0.11 0.34 0000 --- --- --- --- 004074 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 004457 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 004475 00000 ------------ C 0.73 0.41 0.57 T 0.27 0.59 0.43 0000 --- --- --- --- 004648 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 004762 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 004964 00000 ------------ T 0.82 0.70 0.76 C 0.17 0.30 0.24 0000 --- --- --- --- 005132 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005418 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005437 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005446 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005643 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006091 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 006140 00000 ------------ G 0.97 0.96 0.97 A 0.03 0.04 0.03 0000 --- --- --- --- 006355 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 006956 00322 NON-SYN A 1.00 0.98 0.99 G 0.00 0.02 0.01 0083 GAA GGA GLU(E) GLY(G) 007044 00410 SYNON T 0.98 1.00 0.99 C 0.02 0.00 0.01 0112 CAT CAC HIS(H) HIS(H) 007212 00000 ------------ C 0.90 0.41 0.66 T 0.10 0.59 0.34 0000 --- --- --- --- 007531 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007599 00000 ------------ A 0.85 0.53 0.72 T 0.15 0.47 0.28 0000 --- --- --- --- 007901 00000 ------------ G 0.98 0.84 0.92 C 0.02 0.16 0.08 0000 --- --- --- --- 007917 00000 ------------ G 0.93 0.53 0.77 C 0.07 0.47 0.23 0000 --- --- --- --- 007975 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 007995 00000 ------------ G 0.96 0.91 0.94 A 0.04 0.09 0.06 0000 --- --- --- --- 008013 00000 ------------ T 0.87 0.62 0.77 C 0.13 0.38 0.23 0000 --- --- --- --- 008043 00000 ------------ A 0.76 0.47 0.64 G 0.24 0.53 0.36 0000 --- --- --- --- 009304 00443 SYNON T 0.76 0.37 0.56 C 0.24 0.63 0.44 0123 CCT CCC PRO(P) PRO(P) 009314 00453 NON-SYN C 1.00 0.98 0.99 G 0.00 0.02 0.01 0127 CTC GTC LEU(L) VAL(V) 009511 00000 ------------ T 0.74 0.41 0.57 C 0.26 0.59 0.43 0000 --- --- --- --- 009558 00000 ------------ C 0.95 0.96 0.95 T 0.05 0.04 0.05 0000 --- --- --- --- 009612 00000 ------------ C 0.45 0.80 0.64 T 0.55 0.20 0.36 0000 --- --- --- --- 009613 00000 ------------ C 0.55 0.85 0.70 T 0.45 0.15 0.30 0000 --- --- --- --- 011592 00000 ------------ G 0.70 0.90 0.79 A 0.30 0.10 0.21 0000 --- --- --- --- 011610 00000 ------------ T 0.93 0.95 0.94 C 0.07 0.05 0.06 0000 --- --- --- --- 011669 00000 ------------ C 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 011687 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 012564 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 012891 00000 ------------ G 0.74 0.41 0.59 A 0.26 0.59 0.41 0000 --- --- --- --- 013106 00701 SYNON C 0.92 0.97 0.95 A 0.08 0.03 0.05 0209 CGC CGA ARG(R) ARG(R) 013192 00000 ------------ G 0.89 0.98 0.94 A 0.11 0.02 0.06 0000 --- --- --- --- 013231 00000 ------------ A 0.81 0.33 0.55 G 0.19 0.68 0.45 0000 --- --- --- --- 013275 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 013279 00000 ------------ C 0.39 0.74 0.57 A 0.61 0.26 0.43 0000 --- --- --- --- 014170 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014216 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 014509 00000 ------------ C 0.98 0.95 0.97 T 0.02 0.05 0.03 0000 --- --- --- --- 014510 00000 ------------ A 0.98 0.95 0.97 G 0.02 0.05 0.03 0000 --- --- --- --- 015785 00000 ------------ G 0.97 0.64 0.82 A 0.03 0.36 0.18 0000 --- --- --- --- 016001 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016038 00000 ------------ T 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 016078 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 016423 00802 NON-SYN G 0.98 1.00 0.99 C 0.02 0.00 0.01 0243 GGG GCG GLY(G) ALA(A) 016632 00000 ------------ - 0.02 0.33 0.16 + 0.98 0.68 0.84 0000 --- --- --- --- 016834 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018104 01193 SYNON C 0.73 0.70 0.71 T 0.27 0.30 0.29 0373 ATC ATT ILE(I) ILE(I) 018253 01342 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018389 01478 3' UTR T 0.91 0.95 0.93 C 0.09 0.05 0.07 0000 --- --- --- --- 018795 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 018874 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018931 00000 ------------ A 0.43 0.69 0.55 G 0.57 0.31 0.45 0000 --- --- --- --- 019112 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 019346 00000 ------------ A 0.92 0.96 0.94 G 0.08 0.04 0.06 0000 --- --- --- --- 019501 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 019997 00000 ------------ C 0.75 0.71 0.73 A 0.25 0.29 0.27 0000 --- --- --- --- 020194 00000 ------------ C 0.98 0.69 0.84 T 0.02 0.31 0.16 0000 --- --- --- --- 020208 00000 ------------ A 0.50 0.71 0.60 G 0.50 0.29 0.40 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000209: CCA 000757: AAG 004762: TGAG 016078: A 016632: C Site CDNA-Pos Description Allele1 -freq ED-freq Total-freq Allele2 ED-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 001690 00000 ------------ G 0.96 0.93 0.95 A 0.04 0.07 0.05 0000 --- --- --- --- 001788 00000 ------------ - 0.06 0.00 0.03 + 0.94 1.00 0.97 0000 --- --- --- --- 001807 00000 ------------ C 0.96 0.89 0.93 T 0.04 0.11 0.07 0000 --- --- --- --- 002146 00000 ------------ T 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 002235 00000 ------------ A 0.80 0.90 0.85 G 0.20 0.10 0.15 0000 --- --- --- --- 002982 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002988 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003029 00000 ------------ T 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 003039 00000 ------------ - 0.04 0.10 0.07 + 0.96 0.90 0.93 0000 --- --- --- --- 003064 00000 ------------ G 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 003087 00000 ------------ T 1.00 0.88 0.94 C 0.00 0.12 0.06 0000 --- --- --- --- 003741 00000 ------------ T 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 003879 00000 ------------ C 0.95 0.97 0.96 G 0.05 0.03 0.04 0000 --- --- --- --- 004706 00000 ------------ C 0.92 0.88 0.91 A 0.08 0.12 0.09 0000 --- --- --- --- 004762 00000 ------------ G 0.58 0.50 0.56 C 0.42 0.50 0.44 0000 --- --- --- --- 005089 00254 SYNON A 0.98 1.00 0.99 T 0.02 0.00 0.01 0066 GTA GTT VAL(V) VAL(V) 005205 00000 ------------ - 0.91 0.93 0.92 + 0.09 0.07 0.08 0000 --- --- --- --- 005207 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005208 00000 ------------ - 0.27 0.15 0.21 + 0.73 0.85 0.79 0000 --- --- --- --- 005269 00000 ------------ C 0.91 0.93 0.92 T 0.09 0.07 0.08 0000 --- --- --- --- 005700 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005723 00000 ------------ C 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 005832 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005895 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 005905 00000 ------------ A 0.77 0.81 0.79 G 0.23 0.19 0.21 0000 --- --- --- --- 006854 00459 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0135 GGA AGA GLY(G) ARG(R) 007133 00000 ------------ A 0.75 0.22 0.52 C 0.25 0.78 0.48 0000 --- --- --- --- 007254 00000 ------------ - 0.92 1.00 0.95 + 0.08 0.00 0.05 0000 --- --- --- --- 007668 00000 ------------ C 0.90 0.98 0.94 A 0.10 0.02 0.06 0000 --- --- --- --- 007792 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 009983 00000 ------------ C 0.90 0.76 0.84 T 0.10 0.24 0.16 0000 --- --- --- --- 010070 00000 ------------ - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 010182 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 010516 00000 ------------ C 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 010755 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 011335 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011445 00000 ------------ A 0.50 0.76 0.64 C 0.50 0.24 0.36 0000 --- --- --- --- 011493 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011494 00000 ------------ A 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 011749 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 012113 00000 ------------ C 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 012322 00000 ------------ T 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 012494 00000 ------------ T 0.96 0.97 0.96 G 0.04 0.03 0.04 0000 --- --- --- --- 012572 00000 ------------ A 0.93 0.66 0.80 T 0.07 0.34 0.20 0000 --- --- --- --- 012736 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012905 00897 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0281 GAC AAC ASP(D) ASN(N) 013165 00000 ------------ C 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 013265 01082 SYNON C 0.95 1.00 0.97 T 0.05 0.00 0.03 0342 TAC TAT TYR(Y) TYR(Y) 013294 01111 NON-SYN C 0.93 0.39 0.68 G 0.07 0.61 0.33 0352 ACT AGT THR(T) SER(S) 013443 01260 NON-SYN A 0.98 1.00 0.99 G 0.02 0.00 0.01 0402 ATT GTT ILE(I) VAL(V) 013734 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 013752 00000 ------------ - 0.90 1.00 0.95 + 0.10 0.00 0.05 0000 --- --- --- --- 014300 00000 ------------ T 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 014305 00000 ------------ T 0.63 0.74 0.69 G 0.37 0.26 0.31 0000 --- --- --- --- 014365 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 014706 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 014889 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 015191 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 015234 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 015303 00000 ------------ G 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 015416 00000 ------------ T 0.93 0.74 0.83 C 0.07 0.26 0.17 0000 --- --- --- --- 015930 00000 ------------ - 0.84 0.41 0.62 + 0.16 0.59 0.38 0000 --- --- --- --- 016084 00000 ------------ C 0.18 0.82 0.50 T 0.82 0.18 0.50 0000 --- --- --- --- 016577 00000 ------------ T 0.97 0.90 0.94 C 0.03 0.10 0.06 0000 --- --- --- --- 016729 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 016796 00000 ------------ C 0.42 0.70 0.55 A 0.58 0.30 0.45 0000 --- --- --- --- 016802 00000 ------------ T 0.69 1.00 0.84 C 0.31 0.00 0.16 0000 --- --- --- --- 016821 00000 ------------ - 0.85 1.00 0.93 + 0.15 0.00 0.07 0000 --- --- --- --- 016947 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 016959 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 017228 01736 3' UTR A 0.81 0.63 0.72 T 0.19 0.37 0.28 0000 --- --- --- --- 017608 02116 3' UTR C 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 017685 02193 3' UTR - 0.15 0.00 0.07 + 0.85 1.00 0.93 0000 --- --- --- --- 017914 02422 3' UTR - 0.15 0.00 0.07 + 0.85 1.00 0.93 0000 --- --- --- --- 018051 00000 ------------ A 0.66 0.59 0.62 T 0.34 0.41 0.38 0000 --- --- --- --- 018063 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 018485 00000 ------------ T 0.67 0.85 0.76 C 0.33 0.15 0.24 0000 --- --- --- --- 018647 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 018648 00000 ------------ C 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 018649 00000 ------------ C 0.96 0.98 0.97 G 0.04 0.02 0.03 0000 --- --- --- --- 018650 00000 ------------ T 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 019056 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 019516 00000 ------------ - 0.00 0.35 0.17 + 1.00 0.65 0.83 0000 --- --- --- --- NOTE: ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001788: G 003039: AG 005205: C 005208: T 007254: CA 010070: CT 010755: CTT 013752: A 015191: GA 015930: T 016821: AGTT 017685: AAT 017914: AAAGT 019516: ATTT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000053 00000 ------------ T 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 000288 00000 ------------ A 0.75 0.70 0.73 G 0.25 0.30 0.27 0000 --- --- --- --- 000878 00000 ------------ G 0.75 0.68 0.71 T 0.25 0.32 0.29 0000 --- --- --- --- 000927 00000 ------------ C 0.75 0.68 0.71 T 0.25 0.32 0.29 0000 --- --- --- --- 001544 00000 ------------ G 0.69 0.70 0.70 A 0.31 0.30 0.30 0000 --- --- --- --- 001672 00000 ------------ T 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 001684 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001748 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 001830 00000 ------------ A 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 001914 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 001936 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002103 00000 ------------ C 0.89 0.80 0.85 T 0.11 0.20 0.15 0000 --- --- --- --- 002181 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 002182 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 002860 00000 ------------ G 0.88 1.00 0.95 A 0.12 0.00 0.05 0000 --- --- --- --- 002930 00000 ------------ G 0.81 1.00 0.91 T 0.19 0.00 0.09 0000 --- --- --- --- 002943 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 003269 00000 ------------ C 0.81 1.00 0.91 T 0.19 0.00 0.09 0000 --- --- --- --- 003712 00000 ------------ C 0.80 1.00 0.90 T 0.20 0.00 0.10 0000 --- --- --- --- 003770 00000 ------------ A 0.84 1.00 0.92 G 0.16 0.00 0.08 0000 --- --- --- --- 004069 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 004125 00000 ------------ C 0.64 0.52 0.58 T 0.36 0.48 0.42 0000 --- --- --- --- 004186 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 004221 00000 ------------ G 0.70 0.52 0.61 A 0.30 0.48 0.39 0000 --- --- --- --- 004233 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004947 00000 ------------ C 0.50 0.50 0.50 T 0.50 0.50 0.50 0000 --- --- --- --- 005021 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 005151 00000 ------------ A 0.59 0.70 0.64 G 0.41 0.30 0.36 0000 --- --- --- --- 005175 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 005284 00000 ------------ - 0.76 0.40 0.57 + 0.24 0.60 0.42 0000 --- --- --- --- 005408 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005428 00000 ------------ G 0.80 0.73 0.76 T 0.20 0.27 0.24 0000 --- --- --- --- 005671 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005847 00000 ------------ C 0.55 0.50 0.52 A 0.45 0.50 0.48 0000 --- --- --- --- 005862 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 006188 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006233 00000 ------------ C 0.48 0.78 0.64 T 0.52 0.22 0.36 0000 --- --- --- --- 006522 00000 ------------ - 0.11 0.20 0.16 + 0.89 0.80 0.84 0000 --- --- --- --- 006577 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 006920 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 007218 00000 ------------ G 0.79 0.69 0.74 A 0.21 0.31 0.26 0000 --- --- --- --- 007698 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 007826 00000 ------------ T 0.65 0.41 0.53 C 0.35 0.59 0.47 0000 --- --- --- --- 008222 00000 ------------ C 0.93 0.72 0.83 G 0.07 0.28 0.17 0000 --- --- --- --- 008269 00000 ------------ G 0.93 0.69 0.81 T 0.07 0.31 0.19 0000 --- --- --- --- 008273 00000 ------------ T 0.98 0.69 0.83 A 0.02 0.31 0.17 0000 --- --- --- --- 008319 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 008936 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009183 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 009429 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 009571 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 010152 00000 ------------ G 0.94 0.73 0.82 C 0.06 0.27 0.17 0000 --- --- --- --- 010414 00000 ------------ T 0.97 0.73 0.85 C 0.03 0.27 0.15 0000 --- --- --- --- 010433 00000 ------------ G 0.53 0.77 0.66 A 0.47 0.23 0.34 0000 --- --- --- --- 010644 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 010796 00000 ------------ A 0.97 0.80 0.88 G 0.03 0.20 0.12 0000 --- --- --- --- 011141 00000 ------------ G 0.64 0.39 0.51 C 0.36 0.61 0.49 0000 --- --- --- --- 011593 00000 ------------ T 0.62 0.39 0.50 A 0.38 0.61 0.50 0000 --- --- --- --- 012111 00000 ------------ C 0.79 0.67 0.73 T 0.21 0.33 0.27 0000 --- --- --- --- 012461 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 012841 00000 ------------ T 0.82 0.67 0.74 C 0.18 0.33 0.26 0000 --- --- --- --- 013032 00000 ------------ C 0.60 0.70 0.65 T 0.40 0.30 0.35 0000 --- --- --- --- 013066 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 013194 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 013369 00000 ------------ - 0.61 0.70 0.66 + 0.39 0.30 0.34 0000 --- --- --- --- 013439 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 013782 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 014572 00000 ------------ T 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 014706 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 014711 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 014866 00000 ------------ A 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 015329 00000 ------------ G 0.82 0.69 0.76 A 0.17 0.31 0.24 0000 --- --- --- --- 015492 00000 ------------ A 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- 015571 00000 ------------ C 0.67 0.70 0.69 T 0.33 0.30 0.31 0000 --- --- --- --- 016411 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 016430 00000 ------------ C 0.98 0.97 0.97 T 0.02 0.03 0.03 0000 --- --- --- --- 016569 00000 ------------ C 0.76 0.59 0.68 A 0.24 0.41 0.32 0000 --- --- --- --- 016699 00000 ------------ A 0.52 0.81 0.64 G 0.48 0.19 0.36 0000 --- --- --- --- 017135 00000 ------------ T 0.81 0.68 0.74 C 0.19 0.32 0.26 0000 --- --- --- --- 017161 00000 ------------ - 0.79 0.68 0.73 + 0.21 0.32 0.27 0000 --- --- --- --- 017216 00000 ------------ T 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 017348 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 017443 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 017787 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 017837 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 018224 00000 ------------ A 0.89 0.68 0.79 G 0.11 0.32 0.21 0000 --- --- --- --- 018298 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 018370 00000 ------------ G 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 018503 00000 ------------ C 0.50 0.76 0.63 T 0.50 0.24 0.37 0000 --- --- --- --- 018513 00000 ------------ A 0.50 0.76 0.63 G 0.50 0.24 0.37 0000 --- --- --- --- 018553 00000 ------------ C 0.88 0.55 0.72 T 0.12 0.45 0.28 0000 --- --- --- --- 018559 00000 ------------ T 0.90 0.68 0.79 C 0.10 0.32 0.21 0000 --- --- --- --- 018857 00000 ------------ A 1.00 0.95 0.97 G 0.00 0.05 0.03 0000 --- --- --- --- 019792 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 020014 00000 ------------ G 0.82 0.66 0.74 C 0.17 0.34 0.26 0000 --- --- --- --- 020287 00000 ------------ C 0.97 0.75 0.86 T 0.03 0.25 0.14 0000 --- --- --- --- 020449 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 020567 00000 ------------ T 0.77 0.67 0.72 G 0.23 0.33 0.28 0000 --- --- --- --- 020751 00000 ------------ G 0.75 0.65 0.70 A 0.25 0.35 0.30 0000 --- --- --- --- 021209 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 021290 00000 ------------ C 0.85 0.67 0.76 T 0.15 0.33 0.24 0000 --- --- --- --- 021582 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 021807 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 022240 00000 ------------ C 0.84 0.68 0.76 A 0.16 0.32 0.24 0000 --- --- --- --- 022431 00000 ------------ T 0.75 0.54 0.64 C 0.25 0.46 0.36 0000 --- --- --- --- 023283 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 024203 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 024229 00000 ------------ A 0.82 0.67 0.74 G 0.17 0.33 0.26 0000 --- --- --- --- 024294 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 024475 00315 SYNON C 0.75 0.67 0.71 T 0.25 0.33 0.29 0097 GAC GAT ASP(D) ASP(D) 024631 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 024692 00000 ------------ T 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 024732 00000 ------------ A 0.76 0.58 0.68 C 0.24 0.42 0.33 0000 --- --- --- --- 024813 00000 ------------ A 0.93 1.00 0.96 G 0.07 0.00 0.04 0000 --- --- --- --- 024852 00000 ------------ T 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 025079 00000 ------------ - 0.95 1.00 0.98 + 0.05 0.00 0.02 0000 --- --- --- --- 025506 00000 ------------ - 0.95 1.00 0.97 + 0.05 0.00 0.03 0000 --- --- --- --- 025553 00000 ------------ A 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- 025635 00000 ------------ C 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- 025636 00000 ------------ A 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 025637 00000 ------------ C 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 025638 00000 ------------ C 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 025639 00000 ------------ T 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 025640 00000 ------------ T 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 025641 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 025643 00000 ------------ T 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 025645 00000 ------------ G 0.86 0.68 0.78 A 0.14 0.32 0.23 0000 --- --- --- --- 025697 00000 ------------ A 0.52 0.76 0.64 G 0.48 0.24 0.36 0000 --- --- --- --- 025787 00000 ------------ G 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 026179 00000 ------------ G 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 026302 00000 ------------ C 0.91 0.67 0.80 T 0.09 0.33 0.20 0000 --- --- --- --- 026336 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 026370 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 026590 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 027645 00000 ------------ G 0.85 0.67 0.76 T 0.15 0.33 0.24 0000 --- --- --- --- 027927 00000 ------------ T 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 028153 00450 SYNON T 0.93 1.00 0.96 C 0.07 0.00 0.04 0142 GAT GAC ASP(D) ASP(D) 028458 00000 ------------ C 0.58 0.80 0.69 A 0.42 0.20 0.31 0000 --- --- --- --- 028822 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 029006 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 029316 00000 ------------ - 0.15 0.30 0.23 + 0.85 0.70 0.77 0000 --- --- --- --- 029386 00000 ------------ A 0.54 0.78 0.66 G 0.46 0.22 0.34 0000 --- --- --- --- 029523 00000 ------------ A 0.55 0.78 0.67 T 0.45 0.22 0.33 0000 --- --- --- --- 029628 00000 ------------ A 0.54 0.77 0.66 G 0.46 0.23 0.34 0000 --- --- --- --- 029805 00000 ------------ G 0.54 0.77 0.66 A 0.46 0.23 0.34 0000 --- --- --- --- 029841 00000 ------------ C 0.54 0.77 0.66 A 0.46 0.23 0.34 0000 --- --- --- --- 029983 00000 ------------ - 0.94 1.00 0.97 + 0.06 0.00 0.03 0000 --- --- --- --- 030042 00000 ------------ G 0.54 0.77 0.66 C 0.46 0.23 0.34 0000 --- --- --- --- 030059 00000 ------------ A 0.54 0.77 0.66 C 0.46 0.23 0.34 0000 --- --- --- --- 030070 00000 ------------ T 0.56 0.80 0.68 G 0.44 0.20 0.32 0000 --- --- --- --- 030362 00000 ------------ T 0.54 0.77 0.66 C 0.46 0.23 0.34 0000 --- --- --- --- 030456 00000 ------------ C 0.54 0.77 0.66 G 0.46 0.23 0.34 0000 --- --- --- --- 030464 00000 ------------ T 0.67 0.70 0.69 C 0.33 0.30 0.31 0000 --- --- --- --- 030493 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 030604 00000 ------------ T 0.54 0.77 0.66 C 0.46 0.23 0.34 0000 --- --- --- --- 030787 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030931 00000 ------------ A 0.54 0.78 0.66 G 0.46 0.22 0.34 0000 --- --- --- --- 031029 00000 ------------ T 0.54 0.78 0.66 C 0.46 0.22 0.34 0000 --- --- --- --- 031205 00000 ------------ - 0.07 0.00 0.04 + 0.93 1.00 0.96 0000 --- --- --- --- 031427 00000 ------------ C 0.61 0.79 0.70 T 0.39 0.21 0.30 0000 --- --- --- --- 031429 00000 ------------ C 0.55 0.79 0.66 T 0.45 0.21 0.34 0000 --- --- --- --- 031564 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031582 00000 ------------ T 0.55 0.79 0.66 C 0.45 0.21 0.34 0000 --- --- --- --- 031603 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031637 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 031696 00000 ------------ C 0.58 0.52 0.55 T 0.42 0.48 0.45 0000 --- --- --- --- 031697 00000 ------------ G 0.55 0.79 0.67 T 0.45 0.21 0.33 0000 --- --- --- --- 031752 00000 ------------ T 0.57 0.79 0.68 C 0.43 0.21 0.32 0000 --- --- --- --- 031802 00000 ------------ C 0.84 0.70 0.77 T 0.16 0.30 0.23 0000 --- --- --- --- 032024 00000 ------------ A 0.85 0.70 0.77 C 0.15 0.30 0.23 0000 --- --- --- --- 032031 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 032175 00000 ------------ G 0.55 0.84 0.69 T 0.45 0.16 0.31 0000 --- --- --- --- 032221 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 032297 00000 ------------ A 0.55 0.78 0.67 G 0.45 0.22 0.33 0000 --- --- --- --- 032543 00000 ------------ G 0.57 0.78 0.69 A 0.42 0.22 0.31 0000 --- --- --- --- 032627 00000 ------------ T 0.59 0.77 0.70 C 0.41 0.23 0.30 0000 --- --- --- --- 034439 00000 ------------ A 0.85 0.70 0.77 G 0.15 0.30 0.23 0000 --- --- --- --- 034706 00000 ------------ T 0.57 0.78 0.68 C 0.43 0.22 0.32 0000 --- --- --- --- 034983 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 035072 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 035082 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 035289 00000 ------------ A 0.54 0.78 0.66 G 0.46 0.22 0.34 0000 --- --- --- --- 035343 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 035410 00000 ------------ C 0.54 0.77 0.66 T 0.46 0.23 0.34 0000 --- --- --- --- 035605 00000 ------------ T 0.61 0.52 0.57 A 0.39 0.48 0.43 0000 --- --- --- --- 035764 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 036035 00000 ------------ G 0.61 0.52 0.57 A 0.39 0.48 0.43 0000 --- --- --- --- 036276 00000 ------------ G 0.54 0.78 0.66 A 0.46 0.22 0.34 0000 --- --- --- --- 036326 00000 ------------ T 1.00 0.91 0.96 C 0.00 0.09 0.04 0000 --- --- --- --- 036657 00000 ------------ G 0.54 0.78 0.66 A 0.46 0.22 0.34 0000 --- --- --- --- 036745 00000 ------------ A 0.54 0.78 0.66 G 0.46 0.22 0.34 0000 --- --- --- --- 036977 00000 ------------ A 0.84 0.68 0.76 G 0.16 0.33 0.24 0000 --- --- --- --- 036998 00000 ------------ A 0.52 0.80 0.66 T 0.48 0.20 0.34 0000 --- --- --- --- 037020 00000 ------------ G 0.52 0.80 0.66 A 0.48 0.20 0.34 0000 --- --- --- --- 037094 00000 ------------ T 0.52 0.80 0.65 C 0.48 0.20 0.35 0000 --- --- --- --- 037342 00000 ------------ A 0.50 0.80 0.65 G 0.50 0.20 0.35 0000 --- --- --- --- 037544 00000 ------------ T 0.52 0.79 0.65 C 0.48 0.21 0.35 0000 --- --- --- --- 037589 00000 ------------ T 0.50 0.79 0.64 C 0.50 0.21 0.36 0000 --- --- --- --- 037718 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 037777 00000 ------------ T 0.54 0.78 0.66 C 0.46 0.22 0.34 0000 --- --- --- --- 037861 00000 ------------ A 0.55 0.78 0.67 C 0.45 0.22 0.33 0000 --- --- --- --- 037915 00000 ------------ G 0.57 0.52 0.55 T 0.42 0.48 0.45 0000 --- --- --- --- 038126 00000 ------------ A 0.55 0.80 0.67 G 0.45 0.20 0.33 0000 --- --- --- --- 038158 00000 ------------ A 0.55 0.80 0.67 G 0.45 0.20 0.33 0000 --- --- --- --- 038253 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 038286 00000 ------------ G 0.55 0.78 0.67 T 0.45 0.22 0.33 0000 --- --- --- --- 038316 00000 ------------ G 0.57 0.78 0.69 C 0.42 0.22 0.31 0000 --- --- --- --- 038383 00000 ------------ T 0.58 0.79 0.69 A 0.42 0.21 0.31 0000 --- --- --- --- 038391 00000 ------------ G 0.53 0.76 0.65 A 0.47 0.24 0.35 0000 --- --- --- --- 038994 00000 ------------ C 0.55 0.80 0.68 T 0.45 0.20 0.32 0000 --- --- --- --- 039377 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 039425 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 039465 00000 ------------ T 0.54 0.78 0.66 C 0.46 0.22 0.34 0000 --- --- --- --- 039669 00687 SYNON G 0.85 0.70 0.77 A 0.15 0.30 0.23 0221 CCG CCA PRO(P) PRO(P) 039684 00702 SYNON T 0.55 0.78 0.67 C 0.45 0.22 0.33 0226 GAT GAC ASP(D) ASP(D) 039901 00000 ------------ T 0.57 0.78 0.68 C 0.42 0.23 0.33 0000 --- --- --- --- 039922 00000 ------------ C 0.98 0.86 0.92 T 0.02 0.14 0.08 0000 --- --- --- --- 040003 00000 ------------ C 0.58 0.77 0.69 G 0.42 0.23 0.31 0000 --- --- --- --- 040069 00000 ------------ A 0.53 0.80 0.67 T 0.47 0.20 0.33 0000 --- --- --- --- 040183 00000 ------------ T 0.57 0.78 0.69 C 0.42 0.22 0.31 0000 --- --- --- --- 040192 00000 ------------ G 0.60 0.52 0.56 A 0.40 0.48 0.44 0000 --- --- --- --- 040302 00000 ------------ G 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 040313 00000 ------------ C 0.84 0.70 0.77 T 0.16 0.30 0.23 0000 --- --- --- --- 040404 00000 ------------ C 0.57 0.78 0.68 T 0.43 0.22 0.32 0000 --- --- --- --- 040416 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 040548 00000 ------------ C 0.55 0.78 0.67 G 0.45 0.22 0.33 0000 --- --- --- --- 040875 00000 ------------ - 0.57 0.80 0.70 + 0.43 0.20 0.30 0000 --- --- --- --- 041097 00000 ------------ G 0.57 0.81 0.68 A 0.42 0.19 0.32 0000 --- --- --- --- 042326 00777 SYNON C 0.80 0.91 0.86 T 0.20 0.09 0.14 0251 ATC ATT ILE(I) ILE(I) 043021 00000 ------------ A 0.86 0.73 0.79 G 0.14 0.27 0.21 0000 --- --- --- --- 044500 00000 ------------ C 0.87 0.72 0.79 T 0.13 0.28 0.21 0000 --- --- --- --- 044917 00000 ------------ C 0.84 0.70 0.77 T 0.16 0.30 0.23 0000 --- --- --- --- 045830 00000 ------------ T 1.00 0.91 0.96 C 0.00 0.09 0.04 0000 --- --- --- --- 045833 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 046001 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 046051 00000 ------------ C 0.85 0.69 0.77 T 0.15 0.31 0.23 0000 --- --- --- --- 046213 00000 ------------ G 0.83 0.65 0.75 C 0.17 0.35 0.25 0000 --- --- --- --- 046757 00000 ------------ A 0.86 0.68 0.78 G 0.14 0.32 0.22 0000 --- --- --- --- 046827 00000 ------------ G 0.84 0.61 0.73 A 0.16 0.39 0.27 0000 --- --- --- --- 047021 00000 ------------ C 0.85 0.70 0.77 T 0.15 0.30 0.23 0000 --- --- --- --- 047054 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 047095 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 047693 00000 ------------ A 0.86 0.70 0.78 G 0.14 0.30 0.22 0000 --- --- --- --- 047758 00000 ------------ C 0.86 0.69 0.77 G 0.14 0.31 0.23 0000 --- --- --- --- 047956 00000 ------------ T 0.95 0.81 0.88 A 0.05 0.19 0.12 0000 --- --- --- --- 048004 00000 ------------ C 0.83 0.70 0.76 G 0.17 0.30 0.24 0000 --- --- --- --- 048100 00000 ------------ T 0.76 0.91 0.84 C 0.24 0.09 0.16 0000 --- --- --- --- 048312 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 048316 00000 ------------ A 0.85 0.70 0.77 G 0.15 0.30 0.23 0000 --- --- --- --- 048926 00000 ------------ G 0.89 0.69 0.76 T 0.11 0.31 0.24 0000 --- --- --- --- 049492 00000 ------------ T 0.85 0.70 0.78 C 0.15 0.30 0.22 0000 --- --- --- --- 050511 00000 ------------ A 0.86 0.71 0.78 G 0.14 0.29 0.22 0000 --- --- --- --- 050978 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 051157 00000 ------------ T 0.87 0.65 0.76 G 0.13 0.35 0.24 0000 --- --- --- --- 051208 01064 NON-SYN C 0.87 0.65 0.76 T 0.13 0.35 0.24 0347 ACT ATT THR(T) ILE(I) 051927 00000 ------------ A 0.91 0.68 0.79 T 0.09 0.32 0.21 0000 --- --- --- --- 053672 01565 3' UTR C 0.79 0.70 0.74 G 0.21 0.30 0.26 0000 --- --- --- --- 053713 01606 3' UTR T 0.50 0.76 0.66 A 0.50 0.24 0.34 0000 --- --- --- --- 054691 00000 ------------ C 0.84 0.65 0.73 A 0.16 0.35 0.27 0000 --- --- --- --- 055566 00000 ------------ A 0.86 0.70 0.77 T 0.14 0.30 0.23 0000 --- --- --- --- 055586 00000 ------------ C 0.86 0.70 0.77 G 0.14 0.30 0.23 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 005284: T 006522: A 006920: T 013369: T 017161: G 025079: T 025506: G 029316: C 029983: A 031205: T 040875: AT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000131 00000 ------------ C 0.79 0.42 0.61 G 0.21 0.58 0.39 0000 --- --- --- --- 000207 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002431 00000 ------------ C 0.85 0.80 0.83 T 0.15 0.20 0.17 0000 --- --- --- --- 002435 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003729 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003758 00000 ------------ C 0.79 0.89 0.84 G 0.21 0.11 0.16 0000 --- --- --- --- 003923 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004101 00000 ------------ G 0.98 0.96 0.97 C 0.02 0.04 0.03 0000 --- --- --- --- 004133 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 004151 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004495 00000 ------------ C 0.93 0.45 0.70 T 0.07 0.55 0.30 0000 --- --- --- --- 004924 00000 ------------ A 0.88 0.45 0.69 G 0.12 0.55 0.31 0000 --- --- --- --- 005097 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 005162 00000 ------------ A 0.90 0.46 0.68 G 0.10 0.54 0.32 0000 --- --- --- --- 005310 00000 ------------ G 0.92 0.46 0.69 A 0.08 0.54 0.31 0000 --- --- --- --- 005347 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 006079 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 006117 00000 ------------ T 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 006158 00000 ------------ T 0.90 0.42 0.68 C 0.10 0.58 0.33 0000 --- --- --- --- 006339 00000 ------------ T 1.00 0.95 0.97 G 0.00 0.05 0.03 0000 --- --- --- --- 006544 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 006558 00000 ------------ C 0.54 0.73 0.63 T 0.46 0.27 0.37 0000 --- --- --- --- 006702 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 006735 00000 ------------ A 0.76 0.86 0.81 G 0.24 0.14 0.19 0000 --- --- --- --- 006761 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006888 00000 ------------ - 0.05 0.03 0.04 + 0.95 0.97 0.96 0000 --- --- --- --- 006960 00000 ------------ G 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 007022 00000 ------------ A 0.55 0.71 0.63 T 0.45 0.29 0.37 0000 --- --- --- --- 007168 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007398 00000 ------------ A 0.54 0.84 0.68 T 0.46 0.16 0.32 0000 --- --- --- --- 007471 00000 ------------ C 0.96 0.80 0.88 G 0.04 0.20 0.12 0000 --- --- --- --- 007518 00000 ------------ A 0.58 0.93 0.76 G 0.42 0.07 0.24 0000 --- --- --- --- 008169 00000 ------------ C 0.96 0.97 0.96 T 0.04 0.03 0.04 0000 --- --- --- --- 008251 00000 ------------ G 0.77 0.89 0.83 T 0.23 0.11 0.17 0000 --- --- --- --- 008907 00000 ------------ G 0.82 0.90 0.87 A 0.17 0.10 0.13 0000 --- --- --- --- 009199 00000 ------------ T 0.87 1.00 0.94 G 0.13 0.00 0.06 0000 --- --- --- --- 009280 00000 ------------ - 0.20 0.00 0.10 + 0.80 1.00 0.90 0000 --- --- --- --- 009925 -----** 3' UTR G 0.83 0.45 0.64 C 0.17 0.55 0.36 0000 --- --- --- --- 009975 -----** 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010059 00000 ------------ G 0.81 0.98 0.89 A 0.19 0.02 0.11 0000 --- --- --- --- ** Sites are not mapped to the complete CDNA. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 006888: A 009280: GTTTCTGGGTCT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000790 00000 ------------ A 0.76 1.00 0.88 T 0.24 0.00 0.12 0000 --- --- --- --- 000969 00000 ------------ T 0.65 0.93 0.79 C 0.35 0.07 0.21 0000 --- --- --- --- 000970 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001009 00000 ------------ A 0.93 0.65 0.79 G 0.07 0.35 0.21 0000 --- --- --- --- 001123 00000 ------------ A 0.78 1.00 0.89 G 0.23 0.00 0.11 0000 --- --- --- --- 001421 00000 ------------ G 0.76 1.00 0.88 A 0.24 0.00 0.12 0000 --- --- --- --- 001440* 001632 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001724 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001919 00000 ------------ A 0.83 0.74 0.79 T 0.17 0.26 0.21 0000 --- --- --- --- 002667 00641 SYNON G 0.98 0.95 0.97 C 0.02 0.05 0.03 0184 CTG CTC LEU(L) LEU(L) 002892 00866 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003006 00980 3' UTR C 0.68 1.00 0.84 A 0.32 0.00 0.16 0000 --- --- --- --- 003014 00988 3' UTR C 0.86 0.70 0.77 T 0.14 0.30 0.23 0000 --- --- --- --- 003577 01551 3' UTR T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 003872 00000 ------------ G 0.86 0.75 0.81 A 0.14 0.25 0.19 0000 --- --- --- --- 004069 00000 ------------ A 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 004362 00000 ------------ T 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 004741 00000 ------------ C 0.69 0.93 0.80 G 0.31 0.07 0.20 0000 --- --- --- --- 004974 00000 ------------ T 0.76 1.00 0.87 G 0.24 0.00 0.13 0000 --- --- --- --- 005237 00000 ------------ A 0.94 0.64 0.79 G 0.06 0.36 0.21 0000 --- --- --- --- 005288 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005606 00000 ------------ C 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 005676 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005728 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006150 00000 ------------ - 0.24 0.00 0.11 + 0.76 1.00 0.89 0000 --- --- --- --- 006192 00000 ------------ C 0.66 0.93 0.80 A 0.34 0.07 0.20 0000 --- --- --- --- 006333 00000 ------------ - 0.25 0.00 0.12 + 0.75 1.00 0.88 0000 --- --- --- --- 006469 00000 ------------ T 0.61 0.93 0.78 G 0.39 0.07 0.22 0000 --- --- --- --- 006556 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 006677 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 006150: T 006333: GAT The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 001440 A 0.33 0.05 0.19 C 0.26 0.62 0.43 T 0.41 0.33 0.38 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000069 00000 ------------ T 0.55 0.60 0.58 C 0.45 0.40 0.42 0000 --- --- --- --- 000142 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 000533 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 000545 00000 ------------ A 0.58 0.59 0.59 G 0.42 0.41 0.41 0000 --- --- --- --- 000810 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 000907 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000930 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 000979 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001010 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001076 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 001310 00000 ------------ A 0.59 0.62 0.60 C 0.41 0.38 0.40 0000 --- --- --- --- 002050 -----** SYNON G 0.96 1.00 0.98 A 0.04 0.00 0.02 0022 TCG TCA SER(S) SER(S) 002065 -----** SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0027 ACG ACA THR(T) THR(T) 002581 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 002586 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 002949 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002976 -----** SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0069 CCG CCA PRO(P) PRO(P) 003148 00000 ------------ G 0.87 1.00 0.94 C 0.13 0.00 0.06 0000 --- --- --- --- 003247 00000 ------------ A 0.88 0.98 0.93 G 0.12 0.02 0.07 0000 --- --- --- --- 003324 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003347 00000 ------------ T 0.71 0.65 0.68 C 0.29 0.35 0.32 0000 --- --- --- --- 003371 00000 ------------ - 0.17 0.00 0.09 + 0.83 1.00 0.91 0000 --- --- --- --- 003477 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 003569 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003606 00000 ------------ C 0.75 0.83 0.79 T 0.25 0.17 0.21 0000 --- --- --- --- 003741 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003922 -----** NON-SYN C 1.00 0.98 0.99 T 0.00 0.02 0.01 0115 ACC ATC THR(T) ILE(I) 003928 -----** NON-SYN T 0.67 0.80 0.73 C 0.33 0.20 0.27 0117 ATT ACT ILE(I) THR(T) 004040 -----** 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004400 00000 ------------ G 0.41 0.76 0.59 A 0.59 0.24 0.41 0000 --- --- --- --- 004660 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 004706 00000 ------------ A 0.46 0.80 0.62 G 0.54 0.20 0.38 0000 --- --- --- --- 005723 00000 ------------ G 0.43 0.77 0.60 A 0.57 0.23 0.40 0000 --- --- --- --- 005768 00000 ------------ C 0.76 0.96 0.86 T 0.24 0.04 0.14 0000 --- --- --- --- 005798 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 005866 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- ** Sites are not mapped to the complete CDNA. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 003371: G Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000028 00000 ------------ G 0.62 0.50 0.57 A 0.38 0.50 0.43 0000 --- --- --- --- 000321 00000 ------------ C 0.61 0.89 0.74 T 0.39 0.11 0.26 0000 --- --- --- --- 000379 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 000789 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 001158 00000 ------------ G 0.95 0.67 0.82 A 0.05 0.33 0.18 0000 --- --- --- --- 001577 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001607 00000 ------------ G 0.96 0.70 0.83 C 0.04 0.30 0.17 0000 --- --- --- --- 001619 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001980 00000 ------------ C 0.54 0.48 0.51 G 0.46 0.52 0.49 0000 --- --- --- --- 002024 00020 5' UTR A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 002504 00000 ------------ A 0.92 0.95 0.93 G 0.08 0.05 0.07 0000 --- --- --- --- 002584 00000 ------------ C 0.89 0.96 0.92 T 0.11 0.04 0.08 0000 --- --- --- --- 002589 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002617 00000 ------------ C 0.93 0.96 0.95 T 0.07 0.04 0.05 0000 --- --- --- --- 002725 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002754 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002764 00000 ------------ C 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 003254 00000 ------------ G 1.00 0.95 0.97 A 0.00 0.05 0.03 0000 --- --- --- --- 003370 00504 NON-SYN C 0.94 1.00 0.97 A 0.06 0.00 0.03 0157 CTG ATG LEU(L) MET(M) 003421 00555 NON-SYN G 0.96 1.00 0.98 A 0.04 0.00 0.02 0174 GCC ACC ALA(A) THR(T) 003456 00590 SYNON G 0.96 0.72 0.84 A 0.04 0.28 0.16 0185 CTG CTA LEU(L) LEU(L) 003666 00800 3' UTR C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 004050 01184 3' UTR C 0.64 0.89 0.77 T 0.36 0.11 0.23 0000 --- --- --- --- 004105 01239 3' UTR T 0.98 0.95 0.97 C 0.02 0.05 0.03 0000 --- --- --- --- 004145 01279 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004215 01349 3' UTR C 0.58 0.48 0.53 T 0.42 0.52 0.47 0000 --- --- --- --- 004480 00000 ------------ C 0.98 0.68 0.84 G 0.02 0.32 0.16 0000 --- --- --- --- 004522 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 004993 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005168 00000 ------------ T 0.56 0.50 0.53 G 0.44 0.50 0.47 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000094 00000 ------------ G 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 000275 00000 ------------ G 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 000462 00000 ------------ C 1.00 0.80 0.90 T 0.00 0.20 0.10 0000 --- --- --- --- 000666 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000694 00000 ------------ T 0.96 0.98 0.97 C 0.04 0.02 0.03 0000 --- --- --- --- 000848 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 001358 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001964 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 001978 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002010 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 002013 00000 ------------ C 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 002088 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002705 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 002890 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 002997 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 003037 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 003172 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003309 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 003512 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 003917 00000 ------------ T 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 004106 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 004188 00000 ------------ G 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 004220 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 004248 00000 ------------ C 0.84 0.61 0.73 T 0.16 0.39 0.27 0000 --- --- --- --- 004342 00000 ------------ C 0.82 0.61 0.72 T 0.18 0.39 0.28 0000 --- --- --- --- 004593 00000 ------------ - 0.11 0.40 0.26 + 0.89 0.60 0.74 0000 --- --- --- --- 005119 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 005120 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 005439 00000 ------------ T 1.00 0.80 0.90 C 0.00 0.20 0.10 0000 --- --- --- --- 005600 00000 ------------ T 0.85 0.59 0.72 G 0.15 0.41 0.28 0000 --- --- --- --- 005603 00000 ------------ T 0.83 0.59 0.71 G 0.17 0.41 0.29 0000 --- --- --- --- 005840 00000 ------------ G 0.95 0.96 0.95 A 0.05 0.04 0.05 0000 --- --- --- --- 005847 00000 ------------ G 0.82 0.63 0.72 A 0.17 0.37 0.28 0000 --- --- --- --- 005985 00000 ------------ C 0.53 0.57 0.55 G 0.47 0.43 0.45 0000 --- --- --- --- 006246 00000 ------------ C 0.82 0.63 0.72 T 0.18 0.37 0.28 0000 --- --- --- --- 006417 00000 ------------ G 0.93 0.98 0.96 A 0.07 0.02 0.04 0000 --- --- --- --- 006593 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006679 00000 ------------ A 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 006760 00000 ------------ C 0.85 0.59 0.72 T 0.15 0.41 0.28 0000 --- --- --- --- 006761 00000 ------------ G 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 006837 00000 ------------ T 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 006914 00000 ------------ T 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 006959 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 007019 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 007133 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 007166 00000 ------------ A 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 007668 00000 ------------ C 0.56 0.57 0.56 A 0.44 0.43 0.44 0000 --- --- --- --- 007686 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 007834 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 007916 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 007971 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008150 00000 ------------ T 0.96 0.76 0.86 C 0.04 0.24 0.14 0000 --- --- --- --- 008238 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 008362 00000 ------------ - 0.76 0.66 0.71 + 0.24 0.34 0.29 0000 --- --- --- --- 008369 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008668 00274 SYNON C 0.92 1.00 0.96 A 0.08 0.00 0.04 0035 ATC ATA ILE(I) ILE(I) 008671 00277 SYNON C 1.00 0.98 0.99 T 0.00 0.02 0.01 0036 GTC GTT VAL(V) VAL(V) 008985 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009091 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 009172 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 009182 00000 ------------ G 0.98 0.83 0.90 C 0.02 0.17 0.10 0000 --- --- --- --- 009287 00000 ------------ A 0.68 1.00 0.84 G 0.33 0.00 0.16 0000 --- --- --- --- 009328 00000 ------------ C 0.74 0.79 0.76 G 0.26 0.21 0.24 0000 --- --- --- --- 009694 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 009843 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 009959 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 009999 00000 ------------ A 0.95 0.98 0.97 C 0.05 0.02 0.03 0000 --- --- --- --- 010062 00000 ------------ C 0.76 1.00 0.88 G 0.24 0.00 0.12 0000 --- --- --- --- 010159 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 010225 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 010286 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 010343 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011045 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011081 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 011148 00000 ------------ G 0.73 1.00 0.87 C 0.27 0.00 0.13 0000 --- --- --- --- 011201 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 011238 00000 ------------ G 0.80 0.63 0.71 T 0.20 0.37 0.29 0000 --- --- --- --- 011293 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 011300 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 011530 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 011633 00861 NON-SYN T 0.94 1.00 0.97 C 0.06 0.00 0.03 0231 ATG ACG MET(M) THR(T) 011667 00895 SYNON C 1.00 0.98 0.99 T 0.00 0.02 0.01 0242 GCC GCT ALA(A) ALA(A) 012024 01127 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0320 GAC AAC ASP(D) ASN(N) 012201 01206 NON-SYN A 0.94 1.00 0.97 G 0.06 0.00 0.03 0346 CAG CGG GLN(Q) ARG(R) 012267 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012288 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 012406 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 012488 00000 ------------ C 0.90 0.98 0.94 A 0.10 0.02 0.06 0000 --- --- --- --- 012510 00000 ------------ A 0.65 0.80 0.72 G 0.35 0.20 0.28 0000 --- --- --- --- 012796 01382 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0405 GAG AAG GLU(E) LYS(K) 012837 01423 SYNON T 0.79 0.63 0.71 C 0.21 0.37 0.29 0418 CGT CGC ARG(R) ARG(R) 012843 01429 SYNON C 0.77 0.59 0.68 T 0.23 0.41 0.32 0420 ACC ACT THR(T) THR(T) 012963 00000 ------------ G 0.75 1.00 0.87 A 0.25 0.00 0.13 0000 --- --- --- --- 013240 00000 ------------ A 0.93 0.98 0.95 G 0.07 0.02 0.05 0000 --- --- --- --- 013301 00000 ------------ T 0.91 0.63 0.77 C 0.09 0.37 0.23 0000 --- --- --- --- 013874 00000 ------------ G 0.74 1.00 0.86 A 0.26 0.00 0.14 0000 --- --- --- --- 014001 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 014183 00000 ------------ G 0.75 1.00 0.87 A 0.25 0.00 0.13 0000 --- --- --- --- 014494 01488 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0440 CGA CAA ARG(R) GLN(Q) 014585 01579 SYNON G 0.98 0.98 0.98 A 0.02 0.02 0.02 0470 GCG GCA ALA(A) ALA(A) 014774 00000 ------------ C 0.77 0.63 0.70 T 0.23 0.37 0.30 0000 --- --- --- --- 014926 00000 ------------ G 0.96 0.96 0.96 A 0.04 0.04 0.04 0000 --- --- --- --- 015097 01697 NON-SYN G 0.75 1.00 0.87 C 0.25 0.00 0.13 0510 GAC CAC ASP(D) HIS(H) 015235 00000 ------------ A 0.96 0.98 0.97 G 0.04 0.02 0.03 0000 --- --- --- --- 015569 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 015573 00000 ------------ T 0.67 0.80 0.73 C 0.33 0.20 0.27 0000 --- --- --- --- 015778 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 015790 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 016187 01853 NON-SYN T 0.98 1.00 0.99 C 0.02 0.00 0.01 0562 TAC CAC TYR(Y) HIS(H) 016362 01916 NON-SYN C 0.98 1.00 0.99 T 0.02 0.00 0.01 0583 CGT TGT ARG(R) CYS(C) 016409 01963 SYNON C 0.96 1.00 0.98 T 0.04 0.00 0.02 0598 ATC ATT ILE(I) ILE(I) 016585 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 016806 00000 ------------ A 0.64 0.95 0.80 G 0.36 0.05 0.20 0000 --- --- --- --- 017399 00000 ------------ G 0.76 1.00 0.88 A 0.24 0.00 0.12 0000 --- --- --- --- 017444 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 017972 02708 3' UTR T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018529 00000 ------------ G 0.94 0.96 0.95 A 0.06 0.04 0.05 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004593: C 008238: ACA 008362: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000135 00000 ------------ G 0.85 0.83 0.84 C 0.15 0.17 0.16 0000 --- --- --- --- 000267 00000 ------------ G 0.61 0.76 0.69 A 0.39 0.24 0.31 0000 --- --- --- --- 000269 00000 ------------ G 0.92 0.83 0.87 A 0.08 0.17 0.13 0000 --- --- --- --- 000365 00000 ------------ C 0.97 0.98 0.98 T 0.03 0.02 0.02 0000 --- --- --- --- 000594 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 000810 00000 ------------ G 0.55 0.59 0.57 A 0.45 0.41 0.43 0000 --- --- --- --- 000814 00000 ------------ G 0.95 0.98 0.97 T 0.05 0.02 0.03 0000 --- --- --- --- 000832 00000 ------------ C 0.72 0.89 0.81 T 0.28 0.11 0.19 0000 --- --- --- --- 001015 00000 ------------ C 0.67 0.59 0.63 T 0.33 0.41 0.37 0000 --- --- --- --- 001027 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001082 00000 ------------ - 0.04 0.16 0.10 + 0.96 0.84 0.90 0000 --- --- --- --- 001268 00000 ------------ C 0.70 0.75 0.72 G 0.30 0.25 0.28 0000 --- --- --- --- 001476 00000 ------------ C 0.98 0.84 0.91 G 0.02 0.16 0.09 0000 --- --- --- --- 001535 00000 ------------ C 0.96 0.84 0.90 T 0.04 0.16 0.10 0000 --- --- --- --- 001632 00000 ------------ A 0.70 0.75 0.72 G 0.30 0.25 0.28 0000 --- --- --- --- 002758 00000 ------------ C 0.96 1.00 0.97 T 0.04 0.00 0.03 0000 --- --- --- --- 002773 00000 ------------ T 0.67 0.68 0.67 C 0.33 0.32 0.33 0000 --- --- --- --- 002849 00000 ------------ C 0.96 0.96 0.96 T 0.04 0.04 0.04 0000 --- --- --- --- 002948 00000 ------------ C 0.96 0.97 0.96 G 0.04 0.03 0.04 0000 --- --- --- --- 002977 00000 ------------ T 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 003109 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 003649 00000 ------------ C 0.90 0.98 0.94 A 0.10 0.02 0.06 0000 --- --- --- --- 003652 00000 ------------ A 0.70 0.69 0.70 G 0.30 0.31 0.30 0000 --- --- --- --- 003771 00000 ------------ C 0.95 0.83 0.89 T 0.05 0.17 0.11 0000 --- --- --- --- 003843 00000 ------------ A 0.76 0.74 0.75 G 0.24 0.26 0.25 0000 --- --- --- --- 003873 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 004096 00000 ------------ G 0.97 0.95 0.96 A 0.03 0.05 0.04 0000 --- --- --- --- 004178 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004370 00000 ------------ T 0.96 0.83 0.89 C 0.04 0.17 0.11 0000 --- --- --- --- 004420 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 004804 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 004833 00000 ------------ T 0.83 0.98 0.90 C 0.17 0.02 0.10 0000 --- --- --- --- 004983 00000 ------------ A 0.85 0.76 0.81 G 0.15 0.24 0.19 0000 --- --- --- --- 005646 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 005647 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005898 00000 ------------ T 0.79 0.98 0.88 A 0.21 0.02 0.12 0000 --- --- --- --- 005904 00000 ------------ C 0.79 0.98 0.88 G 0.21 0.02 0.12 0000 --- --- --- --- 005930 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 005985 00000 ------------ A 0.96 0.83 0.89 G 0.04 0.17 0.11 0000 --- --- --- --- 006023 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 006029 00000 ------------ A 0.96 0.83 0.89 T 0.04 0.17 0.11 0000 --- --- --- --- 006602 00000 ------------ G 0.90 0.89 0.89 C 0.10 0.11 0.11 0000 --- --- --- --- 006645 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 006920 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 007025 00000 ------------ A 0.70 0.75 0.72 T 0.30 0.25 0.28 0000 --- --- --- --- 007211 00000 ------------ A 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 007279 00000 ------------ G 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 007318 00000 ------------ T 0.70 0.76 0.73 C 0.30 0.24 0.27 0000 --- --- --- --- 007341 00000 ------------ - 0.04 0.02 0.03 + 0.96 0.98 0.97 0000 --- --- --- --- 007444 00000 ------------ T 0.68 0.76 0.72 C 0.32 0.24 0.28 0000 --- --- --- --- 007504 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007596 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 007617 00000 ------------ T 0.70 0.76 0.73 C 0.30 0.24 0.27 0000 --- --- --- --- 007663 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 007917 00000 ------------ G 0.67 0.89 0.78 A 0.33 0.11 0.22 0000 --- --- --- --- 008144 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008175 00000 ------------ C 0.98 0.85 0.91 A 0.02 0.15 0.09 0000 --- --- --- --- 008231 00000 ------------ G 0.81 0.61 0.71 A 0.19 0.39 0.29 0000 --- --- --- --- 008268 00000 ------------ C 0.96 0.76 0.86 T 0.04 0.24 0.14 0000 --- --- --- --- 008442 00000 ------------ G 0.96 1.00 0.97 A 0.04 0.00 0.03 0000 --- --- --- --- 008489 00000 ------------ - 0.04 0.24 0.14 + 0.96 0.76 0.86 0000 --- --- --- --- 008637 00000 ------------ T 0.71 0.76 0.73 C 0.29 0.24 0.27 0000 --- --- --- --- 008673 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 009179 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 009273 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009286 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009561 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 009568 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009640 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 010292 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 010653 00000 ------------ G 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 010747 00000 ------------ T 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 010938 00000 ------------ C 0.96 0.76 0.86 T 0.04 0.24 0.14 0000 --- --- --- --- 011140 00000 ------------ C 0.96 0.83 0.89 T 0.04 0.17 0.11 0000 --- --- --- --- 011318 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 011351 00000 ------------ C 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 011424 00000 ------------ C 0.73 0.61 0.67 T 0.27 0.39 0.33 0000 --- --- --- --- 011483 00000 ------------ C 0.96 0.76 0.86 T 0.04 0.24 0.14 0000 --- --- --- --- 011554 00000 ------------ - 0.27 0.11 0.19 + 0.73 0.89 0.81 0000 --- --- --- --- 011639 00000 ------------ T 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 011786 00000 ------------ G 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 011964 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 012251 00000 ------------ G 0.88 0.78 0.83 A 0.12 0.22 0.17 0000 --- --- --- --- 012429 00000 ------------ G 0.95 0.98 0.97 C 0.05 0.02 0.03 0000 --- --- --- --- 012476 00000 ------------ G 0.88 0.78 0.83 A 0.12 0.22 0.17 0000 --- --- --- --- 012504 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 012722 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 012994 00000 ------------ C 0.92 0.96 0.94 G 0.08 0.04 0.06 0000 --- --- --- --- 013064 00000 ------------ C 0.69 0.89 0.79 T 0.31 0.11 0.21 0000 --- --- --- --- 013077 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 013139 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 013274 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 013465 00000 ------------ G 0.94 0.82 0.88 A 0.06 0.18 0.12 0000 --- --- --- --- 013627 00000 ------------ G 0.96 0.96 0.96 A 0.04 0.04 0.04 0000 --- --- --- --- 013635 00000 ------------ G 0.71 0.89 0.80 T 0.29 0.11 0.20 0000 --- --- --- --- 013852 00511 3' UTR A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 014026 00685 3' UTR G 0.95 0.98 0.97 A 0.05 0.02 0.03 0000 --- --- --- --- 014234 00893 3' UTR G 0.96 0.85 0.90 A 0.04 0.15 0.10 0000 --- --- --- --- 014408 01067 3' UTR C 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 014621 01280 3' UTR G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 014722 01381 3' UTR G 0.95 0.75 0.85 C 0.05 0.25 0.15 0000 --- --- --- --- 015187 01846 3' UTR T 0.96 0.98 0.97 C 0.04 0.02 0.03 0000 --- --- --- --- 015345 02004 3' UTR T 0.93 0.73 0.83 C 0.07 0.27 0.17 0000 --- --- --- --- 015863 02522 3' UTR C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 016216 02875 3' UTR A 0.96 0.96 0.96 T 0.04 0.04 0.04 0000 --- --- --- --- 016231 02890 3' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 016244 02903 3' UTR A 0.58 0.76 0.67 G 0.42 0.24 0.33 0000 --- --- --- --- 016283 02942 3' UTR G 0.65 0.37 0.51 C 0.35 0.63 0.49 0000 --- --- --- --- 016470 03129 3' UTR G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 016515 03174 3' UTR T 0.96 0.98 0.97 C 0.04 0.02 0.03 0000 --- --- --- --- 016650 03309 3' UTR T 0.96 0.98 0.97 G 0.04 0.02 0.03 0000 --- --- --- --- 016752 03411 3' UTR A 0.96 0.98 0.97 G 0.04 0.02 0.03 0000 --- --- --- --- 016980 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 017224 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 017340 00000 ------------ C 0.95 0.83 0.89 T 0.05 0.17 0.11 0000 --- --- --- --- 017613 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 018191 00000 ------------ G 0.71 0.89 0.80 A 0.29 0.11 0.20 0000 --- --- --- --- 018322 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018323 00000 ------------ G 0.96 0.96 0.96 A 0.04 0.04 0.04 0000 --- --- --- --- 018537 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 018567 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018729 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001082: TTAC 004804: GTTAGA 007341: TTGAAG 008489: GA 009640: T 011554: CCAGC Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000132 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000311 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000517 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 000602 00000 ------------ T 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 000720 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 000877 00000 ------------ C 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 000975 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001891 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 001957 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002369 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002594 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002782 00000 ------------ C 0.94 0.82 0.88 T 0.06 0.18 0.12 0000 --- --- --- --- 002996 00000 ------------ A 1.00 0.90 0.96 C 0.00 0.10 0.04 0000 --- --- --- --- 003570 00000 ------------ C 0.84 1.00 0.92 T 0.16 0.00 0.08 0000 --- --- --- --- 003684 00000 ------------ T 0.45 0.80 0.62 C 0.55 0.20 0.38 0000 --- --- --- --- 004139 00000 ------------ T 0.88 0.41 0.65 A 0.12 0.59 0.35 0000 --- --- --- --- 004604 00502 SYNON C 1.00 0.96 0.98 T 0.00 0.04 0.02 0138 ATC ATT ILE(I) ILE(I) 005278 01176 3' UTR G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 005679 01577 3' UTR T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005837 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006474 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 007112 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000128 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000270 00000 ------------ - 0.94 1.00 0.97 + 0.06 0.00 0.03 0000 --- --- --- --- 000294 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000451 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 000459 00000 ------------ A 0.98 0.87 0.92 G 0.02 0.13 0.08 0000 --- --- --- --- 000670 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001192 00201 5' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001270 00279 5' UTR T 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 002136 00000 ------------ G 0.96 0.86 0.91 A 0.04 0.14 0.09 0000 --- --- --- --- 002231 00000 ------------ C 0.96 0.86 0.91 T 0.04 0.14 0.09 0000 --- --- --- --- 002429 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 002459 00000 ------------ C 0.33 0.86 0.59 T 0.67 0.14 0.41 0000 --- --- --- --- 002813 00000 ------------ A 0.83 0.93 0.88 C 0.17 0.07 0.12 0000 --- --- --- --- 002828 00000 ------------ C 0.83 0.93 0.88 A 0.17 0.07 0.12 0000 --- --- --- --- 002839 00000 ------------ A 0.83 0.93 0.88 G 0.17 0.07 0.12 0000 --- --- --- --- 002869 00000 ------------ T 0.83 0.93 0.88 C 0.17 0.07 0.12 0000 --- --- --- --- 002870 00000 ------------ G 0.83 0.93 0.88 A 0.17 0.07 0.12 0000 --- --- --- --- 002932 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002942 00000 ------------ T 0.83 0.93 0.88 C 0.17 0.07 0.12 0000 --- --- --- --- 002947 00000 ------------ T 0.79 0.93 0.86 C 0.21 0.07 0.14 0000 --- --- --- --- 002959 00000 ------------ C 0.83 0.93 0.88 A 0.17 0.07 0.12 0000 --- --- --- --- 002961 00000 ------------ A 0.83 0.93 0.88 G 0.17 0.07 0.12 0000 --- --- --- --- 002982 00000 ------------ C 0.83 0.93 0.88 T 0.17 0.07 0.12 0000 --- --- --- --- 002990 00000 ------------ G 0.83 0.93 0.88 T 0.17 0.07 0.12 0000 --- --- --- --- 003001 00000 ------------ T 0.83 0.93 0.88 G 0.17 0.07 0.12 0000 --- --- --- --- 003543 00000 ------------ C 0.94 1.00 0.98 T 0.06 0.00 0.02 0000 --- --- --- --- 003860 00000 ------------ G 0.77 1.00 0.89 C 0.23 0.00 0.11 0000 --- --- --- --- 004223 00000 ------------ A 0.83 0.93 0.88 G 0.17 0.07 0.12 0000 --- --- --- --- 004772 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004774 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004954 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 005571 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 005577 00000 ------------ A 0.79 1.00 0.89 G 0.21 0.00 0.11 0000 --- --- --- --- 005752 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006025 00774 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0154 ATC ATT ILE(I) ILE(I) 006943 00000 ------------ G 0.33 0.80 0.57 A 0.67 0.20 0.43 0000 --- --- --- --- 006985 00000 ------------ A 0.33 0.80 0.56 T 0.67 0.20 0.44 0000 --- --- --- --- 007327 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 007386 00000 ------------ A 0.83 0.93 0.88 G 0.17 0.07 0.12 0000 --- --- --- --- 007781 00000 ------------ C 0.78 1.00 0.89 G 0.22 0.00 0.11 0000 --- --- --- --- 007782 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 008004 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008081 00000 ------------ A 0.96 0.96 0.96 G 0.04 0.04 0.04 0000 --- --- --- --- 008139 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008350 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 008442 01281 SYNON C 0.40 0.80 0.60 T 0.60 0.20 0.40 0323 CAC CAT HIS(H) HIS(H) 008599 00000 ------------ T 0.96 0.98 0.97 C 0.04 0.02 0.03 0000 --- --- --- --- 008912 00000 ------------ A 0.81 0.93 0.87 G 0.19 0.07 0.13 0000 --- --- --- --- 008994 00000 ------------ T 0.33 0.80 0.56 G 0.67 0.20 0.44 0000 --- --- --- --- 009322 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009346 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009375 00000 ------------ G 0.94 0.89 0.91 A 0.06 0.11 0.09 0000 --- --- --- --- 009496 00000 ------------ G 0.94 0.95 0.95 A 0.06 0.05 0.05 0000 --- --- --- --- 009514 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009666 00000 ------------ G 0.33 0.82 0.57 C 0.67 0.18 0.43 0000 --- --- --- --- 009913 01613 NON-SYN T 0.65 0.91 0.78 C 0.35 0.09 0.22 0434 TTC TCC PHE(F) SER(S) 009926 01626 SYNON G 1.00 0.98 0.99 A 0.00 0.02 0.01 0438 CCG CCA PRO(P) PRO(P) 010181 00000 ------------ C 0.83 0.93 0.88 T 0.17 0.07 0.12 0000 --- --- --- --- 010302 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 010414 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010784 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011054 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 011199 00000 ------------ T 0.90 1.00 0.94 G 0.10 0.00 0.06 0000 --- --- --- --- 011216 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 011285 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 011316 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 011320 00000 ------------ G 0.83 0.95 0.89 A 0.17 0.05 0.11 0000 --- --- --- --- 011460 00000 ------------ G 1.00 0.94 0.97 A 0.00 0.06 0.03 0000 --- --- --- --- 011479 00000 ------------ G 0.33 0.78 0.55 A 0.67 0.23 0.45 0000 --- --- --- --- 011506 00000 ------------ G 0.93 0.85 0.89 A 0.07 0.15 0.11 0000 --- --- --- --- 011630 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011908 00000 ------------ C 0.83 0.95 0.89 G 0.17 0.05 0.11 0000 --- --- --- --- 011963 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 012111 00000 ------------ G 0.34 0.79 0.55 C 0.66 0.21 0.45 0000 --- --- --- --- 012247 00000 ------------ T 0.83 0.92 0.88 C 0.17 0.08 0.12 0000 --- --- --- --- 012268 00000 ------------ C 0.95 0.87 0.91 T 0.05 0.13 0.09 0000 --- --- --- --- 012284 00000 ------------ A 0.95 0.87 0.91 G 0.05 0.13 0.09 0000 --- --- --- --- 012292 00000 ------------ T 0.77 1.00 0.88 C 0.23 0.00 0.12 0000 --- --- --- --- 012294 00000 ------------ T 0.95 0.87 0.91 A 0.05 0.13 0.09 0000 --- --- --- --- 012383 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 012436 01686 SYNON T 0.33 0.86 0.59 C 0.67 0.14 0.41 0458 ATT ATC ILE(I) ILE(I) 012523 01773 SYNON C 0.94 1.00 0.97 T 0.06 0.00 0.03 0487 ATC ATT ILE(I) ILE(I) 012683 01933 3' UTR A 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 012896 02146 3' UTR A 0.86 1.00 0.93 G 0.14 0.00 0.07 0000 --- --- --- --- 012999 02249 3' UTR C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 013062 02312 3' UTR G 0.46 0.93 0.68 A 0.54 0.07 0.32 0000 --- --- --- --- 013071 02321 3' UTR G 0.35 0.89 0.61 C 0.65 0.11 0.39 0000 --- --- --- --- 013077 02327 3' UTR T 0.35 0.89 0.61 C 0.65 0.11 0.39 0000 --- --- --- --- 013131 02381 3' UTR C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 013145 02395 3' UTR A 0.35 0.89 0.61 G 0.65 0.11 0.39 0000 --- --- --- --- 013179 02429 3' UTR T 0.35 0.89 0.61 C 0.65 0.11 0.39 0000 --- --- --- --- 013180 02430 3' UTR G 0.35 0.89 0.61 A 0.65 0.11 0.39 0000 --- --- --- --- 013205 02455 3' UTR C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 013211 02461 3' UTR - 0.45 0.11 0.28 + 0.55 0.89 0.72 0000 --- --- --- --- 013216 02466 3' UTR C 0.58 0.89 0.73 A 0.42 0.11 0.27 0000 --- --- --- --- 013281 02531 3' UTR C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 013309 02559 3' UTR C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 013349 02599 3' UTR C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 013351 02601 3' UTR G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 013402 02652 3' UTR A 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 013403 02653 3' UTR C 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 013451 02701 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014056 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000270: A 004954: CTTTTTTCTATT 013211: ACC Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000201 00000 ------------ T 0.70 0.60 0.63 C 0.30 0.40 0.37 0000 --- --- --- --- 000527 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 000771 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 001087 00000 ------------ A 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 001088 00000 ------------ T 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 001407 00000 ------------ A 0.90 0.89 0.89 T 0.10 0.11 0.11 0000 --- --- --- --- 001487 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001626 00000 ------------ T 0.69 0.89 0.79 C 0.31 0.11 0.21 0000 --- --- --- --- 001722 00000 ------------ T 0.71 0.50 0.60 C 0.29 0.50 0.40 0000 --- --- --- --- 001880 00000 ------------ C 0.80 0.91 0.85 A 0.20 0.09 0.15 0000 --- --- --- --- 001881 00000 ------------ C 0.80 0.91 0.85 T 0.20 0.09 0.15 0000 --- --- --- --- 001887 00000 ------------ C 0.91 0.89 0.90 A 0.09 0.11 0.10 0000 --- --- --- --- 002151 00022 5' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002153 00024 5' UTR C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 002192 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 002212 00000 ------------ - 0.10 0.00 0.05 + 0.90 1.00 0.95 0000 --- --- --- --- 002324 00000 ------------ - 0.08 0.50 0.32 + 0.92 0.50 0.68 0000 --- --- --- --- 002507 00000 ------------ T 0.68 0.91 0.80 C 0.32 0.09 0.20 0000 --- --- --- --- 002521 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 002550 00000 ------------ G 0.79 0.91 0.85 C 0.21 0.09 0.15 0000 --- --- --- --- 002555 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 002575 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 002585 00000 ------------ T 0.88 0.89 0.88 C 0.12 0.11 0.12 0000 --- --- --- --- 002617 00070 NON-SYN C 0.98 1.00 0.99 A 0.02 0.00 0.01 0007 TCC TAC SER(S) TYR(Y) 002631 00084 NON-SYN T 0.79 0.89 0.84 G 0.21 0.11 0.16 0012 TGG GGG TRP(W) GLY(G) 002762 00215 SYNON A 0.72 0.89 0.80 G 0.28 0.11 0.20 0055 CCA CCG PRO(P) PRO(P) 002920 00000 ------------ A 0.87 0.90 0.89 G 0.13 0.10 0.11 0000 --- --- --- --- 002984 00000 ------------ T 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 003115 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 003197 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 003235 00000 ------------ T 0.80 0.89 0.85 C 0.20 0.11 0.15 0000 --- --- --- --- 003249 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 004416 00000 ------------ A 0.86 0.89 0.87 G 0.14 0.11 0.13 0000 --- --- --- --- 004482 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 004614 00296 SYNON C 0.86 0.89 0.87 T 0.14 0.11 0.13 0082 GCC GCT ALA(A) ALA(A) 005412 00000 ------------ T 0.85 0.89 0.87 A 0.15 0.11 0.13 0000 --- --- --- --- 005453 00000 ------------ G 0.85 0.89 0.87 A 0.15 0.11 0.13 0000 --- --- --- --- 005503 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005506 00000 ------------ C 0.94 0.96 0.95 A 0.06 0.04 0.05 0000 --- --- --- --- 005624 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005679 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005727 00000 ------------ T 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 005731 00000 ------------ G 0.85 0.89 0.87 A 0.15 0.11 0.13 0000 --- --- --- --- 005750 00000 ------------ C 0.85 0.89 0.87 A 0.15 0.11 0.13 0000 --- --- --- --- 005751 00000 ------------ C 0.85 0.89 0.87 G 0.15 0.11 0.13 0000 --- --- --- --- 005785 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 005795 00000 ------------ T 0.85 0.89 0.87 C 0.15 0.11 0.13 0000 --- --- --- --- 005831 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005842 00000 ------------ A 0.98 0.89 0.94 G 0.02 0.11 0.06 0000 --- --- --- --- 005867 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 005904 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005923 00000 ------------ G 0.83 0.91 0.87 A 0.17 0.09 0.13 0000 --- --- --- --- 006008 00000 ------------ A 0.82 0.89 0.85 G 0.18 0.11 0.15 0000 --- --- --- --- 006024 00000 ------------ G 0.77 0.89 0.83 A 0.23 0.11 0.17 0000 --- --- --- --- 006047 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 006227 00000 ------------ G 0.85 0.89 0.87 T 0.15 0.11 0.13 0000 --- --- --- --- 006262 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 006489 00000 ------------ T 0.83 0.75 0.79 C 0.17 0.25 0.21 0000 --- --- --- --- 006545 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 006598 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 006631 00000 ------------ G 0.70 0.89 0.80 C 0.30 0.11 0.20 0000 --- --- --- --- 006656 00000 ------------ T 0.84 0.89 0.87 A 0.16 0.11 0.13 0000 --- --- --- --- 007639 00398 SYNON C 0.98 1.00 0.99 G 0.02 0.00 0.01 0116 GCC GCG ALA(A) ALA(A) 008104 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008207 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 008371 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 008425 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008490 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 008506 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 008523 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008665 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008730 00000 ------------ G 0.83 0.90 0.86 A 0.17 0.10 0.14 0000 --- --- --- --- 009175 00000 ------------ A 0.44 0.61 0.52 C 0.56 0.39 0.48 0000 --- --- --- --- 009217 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009237 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009287 00000 ------------ T 0.44 0.61 0.52 C 0.56 0.39 0.48 0000 --- --- --- --- 009293 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009398 00000 ------------ C 0.98 0.95 0.97 T 0.02 0.05 0.03 0000 --- --- --- --- 009428 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009549 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 009638 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009643 00000 ------------ T 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 009812 00604 NON-SYN G 0.98 0.96 0.97 T 0.02 0.04 0.03 0185 GGT GTT GLY(G) VAL(V) 009986 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 010003 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 010418 00000 ------------ A 0.59 0.39 0.50 T 0.41 0.61 0.50 0000 --- --- --- --- 010517 00000 ------------ C 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 010707 00881 SYNON T 0.97 1.00 0.99 C 0.03 0.00 0.01 0277 ACT ACC THR(T) THR(T) 010861 00000 ------------ A 0.69 0.71 0.70 G 0.31 0.29 0.30 0000 --- --- --- --- 013891 00000 ------------ - 0.61 0.36 0.48 + 0.39 0.64 0.52 0000 --- --- --- --- 014121 00000 ------------ G 0.95 0.89 0.92 A 0.05 0.11 0.08 0000 --- --- --- --- 014208 01079 SYNON C 0.76 0.52 0.64 T 0.24 0.48 0.36 0343 CAC CAT HIS(H) HIS(H) 014304 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 014348 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 014443 00000 ------------ C 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 014531 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 014546* 014596 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 014680 00000 ------------ A 0.81 0.75 0.78 T 0.19 0.25 0.22 0000 --- --- --- --- 014737 00000 ------------ T 0.90 0.89 0.89 C 0.10 0.11 0.11 0000 --- --- --- --- 014784 00000 ------------ C 0.71 0.72 0.71 T 0.29 0.28 0.29 0000 --- --- --- --- 015021* 015055 00000 ------------ T 0.44 0.61 0.52 G 0.56 0.39 0.48 0000 --- --- --- --- 015101 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 015127 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 015180 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 015241 00000 ------------ G 0.91 0.90 0.91 A 0.09 0.10 0.09 0000 --- --- --- --- 015275 00000 ------------ G 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 015581 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 015620 00000 ------------ G 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 015734 00000 ------------ T 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 015790 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015793 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 015881 00000 ------------ C 0.90 0.89 0.89 T 0.10 0.11 0.11 0000 --- --- --- --- 015996 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 016105 00000 ------------ T 0.60 0.61 0.61 C 0.40 0.39 0.39 0000 --- --- --- --- 016283 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 016299 00000 ------------ C 0.83 0.76 0.80 T 0.17 0.24 0.20 0000 --- --- --- --- 016358 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016536 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 016551 00000 ------------ A 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 016597 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 017040 00000 ------------ T 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 017074 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017429 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 017638 00000 ------------ - 0.83 0.76 0.80 + 0.17 0.24 0.20 0000 --- --- --- --- 018248 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 018354 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018709 00000 ------------ C 0.90 1.00 0.94 T 0.10 0.00 0.06 0000 --- --- --- --- 019114 00000 ------------ G 0.85 0.80 0.82 C 0.15 0.20 0.18 0000 --- --- --- --- 019352 00000 ------------ G 0.77 0.52 0.64 A 0.23 0.48 0.36 0000 --- --- --- --- 019508 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 019595 00000 ------------ G 0.71 0.59 0.65 A 0.29 0.41 0.35 0000 --- --- --- --- 020518 00000 ------------ C 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 020597 01347 NON-SYN G 0.91 0.83 0.87 A 0.09 0.17 0.13 0433 GTG ATG VAL(V) MET(M) 020900 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020980 00000 ------------ C 0.43 0.70 0.57 T 0.57 0.30 0.43 0000 --- --- --- --- 021157 00000 ------------ A 0.86 0.79 0.82 T 0.14 0.21 0.18 0000 --- --- --- --- 021439 01605 NON-SYN C 0.83 0.93 0.88 A 0.17 0.07 0.12 0519 CTG ATG LEU(L) MET(M) 021574 01740 3' UTR T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 021623 01789 3' UTR G 0.70 0.52 0.61 A 0.30 0.48 0.39 0000 --- --- --- --- 021844 02010 3' UTR C 0.73 0.52 0.63 T 0.27 0.48 0.37 0000 --- --- --- --- 021861 02027 3' UTR G 0.85 0.93 0.89 A 0.15 0.07 0.11 0000 --- --- --- --- 021988 02154 3' UTR G 0.83 0.75 0.79 C 0.17 0.25 0.21 0000 --- --- --- --- 022274 00000 ------------ - 0.19 0.22 0.20 + 0.81 0.78 0.80 0000 --- --- --- --- 022370 00000 ------------ A 0.80 0.81 0.81 G 0.20 0.19 0.19 0000 --- --- --- --- 022446 00000 ------------ T 0.86 1.00 0.93 C 0.14 0.00 0.07 0000 --- --- --- --- 022608 00000 ------------ C 0.84 0.76 0.80 G 0.16 0.24 0.20 0000 --- --- --- --- 022627 00000 ------------ G 0.98 0.88 0.93 A 0.02 0.12 0.07 0000 --- --- --- --- 023061 00000 ------------ C 0.88 0.80 0.84 T 0.12 0.20 0.16 0000 --- --- --- --- 023062 00000 ------------ G 0.72 0.53 0.62 A 0.28 0.47 0.38 0000 --- --- --- --- 023087 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 023091 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 023123 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023291 00000 ------------ T 0.86 0.79 0.82 C 0.14 0.21 0.18 0000 --- --- --- --- 023331 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 023421 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002212: G 002324: CA 009549: AG 009986: A 010003: GGA 013891: G 014546: C 015581: A 017638: ATATATATTAGAGGTACAATGTGATGTTATGATGTATGTATACAACCTGAAATTATTAAATCAAGGTAATGAACAAATCCATCACTTCATATATTTATCATTTTTATGTTGAGAACAT 022274: AA The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 014546 - 0.18 0.24 0.21 C 0.75 0.76 0.76 T 0.07 0.00 0.03 015021 A 0.04 0.11 0.07 C 0.04 0.00 0.02 G 0.92 0.89 0.90 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 001097 00000 ------------ A 0.57 0.74 0.64 G 0.43 0.26 0.36 0000 --- --- --- --- 001185 00000 ------------ A 0.76 0.68 0.72 G 0.24 0.32 0.28 0000 --- --- --- --- 001602 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001699 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 001860 00000 ------------ C 0.74 0.57 0.66 T 0.26 0.43 0.34 0000 --- --- --- --- 002191 00000 ------------ T 0.77 0.62 0.70 G 0.23 0.38 0.30 0000 --- --- --- --- 002317 00000 ------------ G 0.88 0.83 0.86 A 0.12 0.17 0.14 0000 --- --- --- --- 002431 00000 ------------ C 0.89 0.80 0.84 T 0.11 0.20 0.16 0000 --- --- --- --- 002944 00000 ------------ C 0.98 0.91 0.95 G 0.02 0.09 0.05 0000 --- --- --- --- 002975 00000 ------------ G 0.89 0.78 0.84 T 0.11 0.22 0.16 0000 --- --- --- --- 003068 00000 ------------ C 0.84 0.67 0.76 T 0.16 0.33 0.24 0000 --- --- --- --- 003087 00000 ------------ T 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 003161 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003233 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 003633 00000 ------------ C 1.00 0.92 0.96 T 0.00 0.08 0.04 0000 --- --- --- --- 003635 00000 ------------ T 0.85 0.66 0.76 C 0.15 0.34 0.24 0000 --- --- --- --- 003639 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003717 00000 ------------ C 0.96 0.93 0.94 T 0.04 0.07 0.06 0000 --- --- --- --- 003977 00000 ------------ G 0.70 0.45 0.58 A 0.30 0.55 0.42 0000 --- --- --- --- 004020 00000 ------------ - 0.77 0.59 0.68 + 0.23 0.41 0.32 0000 --- --- --- --- 004053 00000 ------------ A 0.63 0.43 0.53 G 0.37 0.57 0.47 0000 --- --- --- --- 004098 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 004235 00000 ------------ - 0.10 0.23 0.16 + 0.90 0.78 0.84 0000 --- --- --- --- 005187 00000 ------------ G 0.72 0.46 0.58 A 0.28 0.54 0.42 0000 --- --- --- --- 005202 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005245 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 005269 00000 ------------ T 0.70 0.46 0.58 C 0.30 0.54 0.42 0000 --- --- --- --- 005406 00000 ------------ A 0.72 0.46 0.59 G 0.28 0.54 0.41 0000 --- --- --- --- 005686 00000 ------------ C 0.73 0.45 0.59 G 0.27 0.55 0.41 0000 --- --- --- --- 005702 00000 ------------ - 0.28 0.54 0.41 + 0.72 0.46 0.59 0000 --- --- --- --- 005739 00000 ------------ C 0.83 0.65 0.74 T 0.17 0.35 0.26 0000 --- --- --- --- 006137 00000 ------------ C 0.73 0.46 0.60 T 0.27 0.54 0.40 0000 --- --- --- --- 006341 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 006461 00000 ------------ C 0.83 0.65 0.74 A 0.17 0.35 0.26 0000 --- --- --- --- 006780 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007059 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 007268 00000 ------------ T 0.90 0.80 0.85 C 0.10 0.20 0.15 0000 --- --- --- --- 007725 00000 ------------ A 0.81 0.46 0.62 T 0.19 0.54 0.38 0000 --- --- --- --- 007825 00000 ------------ G 0.81 0.48 0.64 A 0.19 0.52 0.36 0000 --- --- --- --- 007940 00000 ------------ T 0.81 0.46 0.62 C 0.19 0.54 0.38 0000 --- --- --- --- 008100 00000 ------------ - 0.83 1.00 0.92 + 0.17 0.00 0.08 0000 --- --- --- --- 008225 00000 ------------ C 0.91 0.65 0.78 T 0.09 0.35 0.22 0000 --- --- --- --- 008695 00000 ------------ C 0.83 0.64 0.74 A 0.17 0.36 0.26 0000 --- --- --- --- 009229 00000 ------------ C 0.76 0.50 0.62 T 0.24 0.50 0.38 0000 --- --- --- --- 009512 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009855 00000 ------------ C 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 010062 00000 ------------ C 0.35 0.70 0.52 T 0.65 0.30 0.48 0000 --- --- --- --- 010107 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 010126 00000 ------------ A 0.33 0.70 0.51 G 0.67 0.30 0.49 0000 --- --- --- --- 010351 00659 SYNON G 0.94 0.89 0.91 A 0.06 0.11 0.09 0203 CTG CTA LEU(L) LEU(L) 010429 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 010445 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 010511 00000 ------------ C 0.79 0.80 0.80 T 0.21 0.20 0.20 0000 --- --- --- --- 010875 00000 ------------ T 0.70 0.46 0.58 C 0.30 0.54 0.42 0000 --- --- --- --- 011179 00856 NON-SYN C 0.95 0.78 0.86 A 0.05 0.22 0.14 0269 GCC GAC ALA(A) ASP(D) 011181 00858 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0270 GTC ATC VAL(V) ILE(I) 011185 00862 NON-SYN T 0.98 1.00 0.99 C 0.02 0.00 0.01 0271 ATC ACC ILE(I) THR(T) 011204 00881 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0277 ACC ACT THR(T) THR(T) 011372 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 012005 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 012975 00000 ------------ A 0.90 0.80 0.85 T 0.10 0.20 0.15 0000 --- --- --- --- 013010 00000 ------------ C 0.90 0.80 0.85 T 0.10 0.20 0.15 0000 --- --- --- --- 013182 00000 ------------ - 0.90 0.78 0.84 + 0.10 0.22 0.16 0000 --- --- --- --- 013241 00000 ------------ T 0.90 0.82 0.86 A 0.10 0.17 0.14 0000 --- --- --- --- 013403 00000 ------------ - 0.80 0.68 0.74 + 0.20 0.32 0.26 0000 --- --- --- --- 013551 00000 ------------ T 0.81 0.67 0.74 A 0.19 0.33 0.26 0000 --- --- --- --- 013573 00000 ------------ G 0.81 0.67 0.74 C 0.19 0.33 0.26 0000 --- --- --- --- 013705 00992 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0314 TCC TCT SER(S) SER(S) 013823 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 013880 00000 ------------ A 0.89 0.80 0.85 C 0.11 0.20 0.15 0000 --- --- --- --- 013994 01094 SYNON G 0.91 0.80 0.86 A 0.09 0.20 0.14 0348 CCG CCA PRO(P) PRO(P) 014024 01124 SYNON A 0.67 0.48 0.58 G 0.33 0.52 0.42 0358 GTA GTG VAL(V) VAL(V) 014078 00000 ------------ G 0.91 0.89 0.90 A 0.09 0.11 0.10 0000 --- --- --- --- 014101 00000 ------------ G 0.89 0.83 0.86 C 0.11 0.17 0.14 0000 --- --- --- --- 014232 00000 ------------ C 0.89 0.78 0.84 G 0.11 0.22 0.16 0000 --- --- --- --- 014296 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 014301 00000 ------------ A 0.89 0.80 0.85 T 0.11 0.20 0.15 0000 --- --- --- --- 014374 00000 ------------ T 0.98 0.93 0.96 G 0.02 0.07 0.04 0000 --- --- --- --- 014433 00000 ------------ T 0.80 0.67 0.73 C 0.20 0.33 0.27 0000 --- --- --- --- 014523 00000 ------------ T 0.68 0.45 0.57 C 0.32 0.55 0.43 0000 --- --- --- --- 014619 00000 ------------ C 1.00 0.91 0.95 A 0.00 0.09 0.05 0000 --- --- --- --- 014711 00000 ------------ G 0.91 0.77 0.84 A 0.09 0.23 0.16 0000 --- --- --- --- 014817 00000 ------------ G 0.82 0.66 0.74 A 0.18 0.34 0.26 0000 --- --- --- --- 015075 00000 ------------ - 0.23 0.50 0.34 + 0.78 0.50 0.66 0000 --- --- --- --- 015174 00000 ------------ T 0.75 0.53 0.64 C 0.25 0.47 0.36 0000 --- --- --- --- 015197 00000 ------------ - 0.09 0.17 0.13 + 0.91 0.83 0.87 0000 --- --- --- --- 015241 00000 ------------ T 0.93 0.91 0.92 C 0.07 0.09 0.08 0000 --- --- --- --- 015244 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 015246 00000 ------------ T 0.84 0.67 0.76 C 0.16 0.33 0.24 0000 --- --- --- --- 015259 00000 ------------ C 0.98 0.91 0.95 T 0.02 0.09 0.05 0000 --- --- --- --- 015265 00000 ------------ C 0.80 0.67 0.74 T 0.20 0.33 0.26 0000 --- --- --- --- 015317 00000 ------------ C 0.91 0.83 0.87 T 0.09 0.17 0.13 0000 --- --- --- --- 015465 00000 ------------ C 0.84 0.67 0.76 T 0.16 0.33 0.24 0000 --- --- --- --- 015860 00000 ------------ C 0.86 0.67 0.76 A 0.14 0.33 0.24 0000 --- --- --- --- 015903 00000 ------------ G 0.95 0.83 0.88 A 0.05 0.17 0.12 0000 --- --- --- --- 016073 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016112 00000 ------------ G 0.91 0.81 0.86 A 0.09 0.19 0.14 0000 --- --- --- --- 016126 00000 ------------ C 0.91 0.81 0.86 A 0.09 0.19 0.14 0000 --- --- --- --- 016373 00000 ------------ G 0.97 0.80 0.88 A 0.03 0.20 0.12 0000 --- --- --- --- 016517 00000 ------------ C 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- 016579 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 016723 00000 ------------ A 0.68 0.45 0.56 G 0.32 0.55 0.44 0000 --- --- --- --- 016774 00000 ------------ A 0.79 0.67 0.73 T 0.21 0.33 0.27 0000 --- --- --- --- 016818 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 016819 00000 ------------ G 0.94 0.89 0.91 A 0.06 0.11 0.09 0000 --- --- --- --- 016913 00000 ------------ A 0.69 0.80 0.74 G 0.31 0.20 0.26 0000 --- --- --- --- 016955 00000 ------------ A 0.81 0.67 0.74 G 0.19 0.33 0.26 0000 --- --- --- --- 017170 00000 ------------ C 0.48 0.74 0.61 T 0.52 0.26 0.39 0000 --- --- --- --- 017198 00000 ------------ G 0.80 0.65 0.73 C 0.20 0.35 0.27 0000 --- --- --- --- 018114 00000 ------------ A 0.87 0.68 0.77 C 0.13 0.33 0.23 0000 --- --- --- --- 018115 00000 ------------ G 0.92 0.68 0.79 A 0.08 0.33 0.21 0000 --- --- --- --- 018274 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 018303 00000 ------------ C 0.92 0.85 0.88 G 0.08 0.15 0.12 0000 --- --- --- --- 018311 00000 ------------ T 0.90 0.85 0.87 A 0.10 0.15 0.13 0000 --- --- --- --- 018477 00000 ------------ C 0.89 0.80 0.85 A 0.11 0.20 0.15 0000 --- --- --- --- 018491 00000 ------------ G 0.89 0.80 0.85 A 0.11 0.20 0.15 0000 --- --- --- --- 018618 00000 ------------ G 0.90 0.80 0.85 C 0.10 0.20 0.15 0000 --- --- --- --- 018779 00000 ------------ - 0.73 0.59 0.66 + 0.27 0.41 0.34 0000 --- --- --- --- 018803 00000 ------------ T 0.94 0.83 0.88 C 0.06 0.17 0.12 0000 --- --- --- --- 018976 00000 ------------ T 0.98 0.91 0.95 G 0.02 0.09 0.05 0000 --- --- --- --- 019095 00000 ------------ C 0.80 0.67 0.74 A 0.20 0.33 0.26 0000 --- --- --- --- 019097 00000 ------------ T 0.80 0.67 0.74 C 0.20 0.33 0.26 0000 --- --- --- --- 019557 00000 ------------ A 0.73 0.48 0.60 C 0.27 0.52 0.40 0000 --- --- --- --- 019574 00000 ------------ C 0.68 0.48 0.58 A 0.32 0.52 0.42 0000 --- --- --- --- 019683 00000 ------------ C 0.72 0.48 0.60 G 0.28 0.52 0.40 0000 --- --- --- --- 019753 00000 ------------ G 0.72 0.48 0.60 A 0.28 0.52 0.40 0000 --- --- --- --- 019782 00000 ------------ C 0.61 0.77 0.69 T 0.39 0.23 0.31 0000 --- --- --- --- 019785 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 019833 00000 ------------ T 0.73 0.48 0.61 G 0.27 0.52 0.39 0000 --- --- --- --- 019834 00000 ------------ T 0.73 0.48 0.61 C 0.27 0.52 0.39 0000 --- --- --- --- 019929 00000 ------------ G 0.83 0.67 0.76 A 0.17 0.33 0.24 0000 --- --- --- --- 019968 00000 ------------ A 0.63 0.83 0.73 G 0.37 0.17 0.27 0000 --- --- --- --- 020011 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 020017 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 020079 00000 ------------ G 0.72 0.45 0.58 A 0.28 0.55 0.42 0000 --- --- --- --- 020090 00000 ------------ C 1.00 0.91 0.95 T 0.00 0.09 0.05 0000 --- --- --- --- 020109 00000 ------------ T 0.72 0.43 0.56 A 0.28 0.57 0.44 0000 --- --- --- --- 020131 00000 ------------ C 0.95 0.89 0.92 G 0.05 0.11 0.08 0000 --- --- --- --- 020152 00000 ------------ - 0.72 0.45 0.57 + 0.28 0.55 0.43 0000 --- --- --- --- 020153 00000 ------------ C 0.70 0.46 0.58 T 0.30 0.54 0.42 0000 --- --- --- --- 020158 00000 ------------ T 0.75 0.48 0.61 G 0.25 0.52 0.39 0000 --- --- --- --- 020161 00000 ------------ G 0.71 0.48 0.59 C 0.29 0.52 0.41 0000 --- --- --- --- 020176 00000 ------------ T 0.76 0.48 0.61 G 0.24 0.52 0.39 0000 --- --- --- --- 020269 00000 ------------ A 0.72 0.59 0.65 C 0.28 0.41 0.35 0000 --- --- --- --- 020296 00000 ------------ T 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 020316 00000 ------------ C 0.80 0.59 0.70 T 0.20 0.41 0.30 0000 --- --- --- --- 020322 00000 ------------ T 0.83 0.65 0.74 C 0.17 0.35 0.26 0000 --- --- --- --- 020324 00000 ------------ C 0.78 0.65 0.72 T 0.22 0.35 0.28 0000 --- --- --- --- 020330 00000 ------------ C 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 020331 00000 ------------ T 0.80 0.59 0.70 A 0.20 0.41 0.30 0000 --- --- --- --- 020491 01605 FRAME SHIFT - 0.02 0.00 0.01 + 0.98 1.00 0.99 0519 -TG CTG --- --- 020675 01789 3' UTR A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 020694 01808 3' UTR A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 020722 01836 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020767 01881 3' UTR G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 021004 02118 3' UTR C 0.91 0.89 0.90 T 0.09 0.11 0.10 0000 --- --- --- --- 021056 02170 3' UTR G 0.98 0.91 0.94 A 0.02 0.09 0.06 0000 --- --- --- --- 021088 02202 3' UTR A 0.80 0.62 0.72 G 0.20 0.38 0.28 0000 --- --- --- --- 021332 02446 3' UTR - 0.56 0.26 0.42 + 0.44 0.74 0.58 0000 --- --- --- --- 021419 02533 3' UTR G 0.96 0.96 0.96 A 0.04 0.04 0.04 0000 --- --- --- --- 021436 02550 3' UTR - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 021439 02553 3' UTR T 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 021556 02670 3' UTR G 0.80 0.55 0.68 T 0.20 0.45 0.32 0000 --- --- --- --- 021559 02673 3' UTR C 0.83 0.55 0.69 G 0.17 0.45 0.31 0000 --- --- --- --- 021563 02677 3' UTR C 0.83 0.55 0.69 T 0.17 0.45 0.31 0000 --- --- --- --- 021677 02791 3' UTR - 0.20 0.38 0.29 + 0.80 0.62 0.71 0000 --- --- --- --- 021910 03024 3' UTR T 0.88 0.68 0.76 C 0.12 0.33 0.24 0000 --- --- --- --- 021943 03057 3' UTR A 0.74 0.59 0.66 T 0.26 0.41 0.34 0000 --- --- --- --- 022031 03145 3' UTR C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 022040 03154 3' UTR A 0.84 0.59 0.72 G 0.16 0.41 0.28 0000 --- --- --- --- 022081 03195 3' UTR T 0.83 0.59 0.71 C 0.17 0.41 0.29 0000 --- --- --- --- 022116 03230 3' UTR T 0.83 0.59 0.71 C 0.17 0.41 0.29 0000 --- --- --- --- 022117 03231 3' UTR G 0.98 0.91 0.94 T 0.02 0.09 0.06 0000 --- --- --- --- 022119 03233 3' UTR C 0.83 0.59 0.71 T 0.17 0.41 0.29 0000 --- --- --- --- 022279 03393 3' UTR T 0.71 0.59 0.65 C 0.29 0.41 0.35 0000 --- --- --- --- 022286 03400 3' UTR A 0.74 0.67 0.71 G 0.26 0.33 0.29 0000 --- --- --- --- 022416 03530 3' UTR - 0.72 0.59 0.66 + 0.28 0.41 0.34 0000 --- --- --- --- 022473 03587 3' UTR C 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 022474 03588 3' UTR G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 022541 03655 3' UTR G 0.71 0.59 0.65 T 0.29 0.41 0.35 0000 --- --- --- --- 022685 03799 3' UTR A 0.62 0.39 0.51 T 0.38 0.61 0.49 0000 --- --- --- --- 022722 03836 3' UTR A 0.62 0.39 0.51 G 0.38 0.61 0.49 0000 --- --- --- --- 022770 03884 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022807 03921 3' UTR T 0.42 0.61 0.51 A 0.58 0.39 0.49 0000 --- --- --- --- 022829 03943 3' UTR T 0.98 0.91 0.95 C 0.02 0.09 0.05 0000 --- --- --- --- 022838 03952 3' UTR T 0.62 0.39 0.51 C 0.38 0.61 0.49 0000 --- --- --- --- 022856 03970 3' UTR G 0.62 0.39 0.51 A 0.38 0.61 0.49 0000 --- --- --- --- 022872 03986 3' UTR A 0.62 0.39 0.51 T 0.38 0.61 0.49 0000 --- --- --- --- 023024 04138 3' UTR T 0.98 0.91 0.95 C 0.02 0.09 0.05 0000 --- --- --- --- 023025 04139 3' UTR G 0.62 0.39 0.51 A 0.38 0.61 0.49 0000 --- --- --- --- 023030 04144 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023043 04157 3' UTR T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 023046 04160 3' UTR A 0.62 0.39 0.51 G 0.38 0.61 0.49 0000 --- --- --- --- 023384 04498 3' UTR C 0.41 0.61 0.51 G 0.59 0.39 0.49 0000 --- --- --- --- 023573 04687 3' UTR - 0.02 0.07 0.05 + 0.98 0.93 0.95 0000 --- --- --- --- 023619 04733 3' UTR - 0.31 0.55 0.44 + 0.69 0.45 0.56 0000 --- --- --- --- 023625 04739 3' UTR A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 023648 04762 3' UTR T 0.62 0.39 0.51 C 0.38 0.61 0.49 0000 --- --- --- --- 023678 04792 3' UTR G 0.92 0.80 0.86 T 0.08 0.20 0.14 0000 --- --- --- --- 023736 04850 3' UTR A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 023780 04894 3' UTR A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 024224 00000 ------------ G 0.64 0.41 0.52 A 0.36 0.59 0.48 0000 --- --- --- --- 024259 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 024368 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 024550 00000 ------------ T 0.98 0.93 0.96 G 0.02 0.07 0.04 0000 --- --- --- --- 024765 00000 ------------ C 0.93 0.80 0.87 T 0.07 0.20 0.13 0000 --- --- --- --- 024914 00000 ------------ C 0.92 0.89 0.90 T 0.08 0.11 0.10 0000 --- --- --- --- 024970 00000 ------------ T 0.72 0.39 0.55 A 0.28 0.61 0.45 0000 --- --- --- --- 025021 00000 ------------ G 0.98 0.91 0.95 T 0.02 0.09 0.05 0000 --- --- --- --- 025215 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 025284 00000 ------------ T 0.83 0.67 0.76 G 0.17 0.33 0.24 0000 --- --- --- --- 025287 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025383 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 025388 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025476 00000 ------------ T 0.91 0.80 0.86 G 0.09 0.20 0.14 0000 --- --- --- --- 025519 00000 ------------ C 0.68 0.38 0.53 T 0.32 0.62 0.47 0000 --- --- --- --- 025637 00000 ------------ G 0.93 0.89 0.90 T 0.07 0.11 0.10 0000 --- --- --- --- 025810 00000 ------------ A 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004020: GGATGGAT 004235: ATAG 005702: GGA 008100: A 013182: AGAGAG 013403: T 015075: G 015197: A 016579: A 018779: ATT 020152: G 020491: C 021332: T 021436: AA 021677: TG 022416: CAAAA 023573: AGTATAT 023619: T Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 002049 00000 ------------ C 0.95 0.78 0.87 T 0.05 0.22 0.13 0000 --- --- --- --- 002124 00000 ------------ - 0.18 0.22 0.20 + 0.82 0.78 0.80 0000 --- --- --- --- 002333 00000 ------------ A 0.67 0.57 0.62 G 0.33 0.43 0.38 0000 --- --- --- --- 002462 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002522 00004 5' UTR - 0.83 1.00 0.91 + 0.17 0.00 0.09 0000 --- --- --- --- 002568 00050 5' UTR C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002879 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003082 00000 ------------ G 0.57 0.64 0.60 T 0.43 0.36 0.40 0000 --- --- --- --- 003436 00402 NON-SYN G 0.98 1.00 0.99 T 0.02 0.00 0.01 0052 CGT CTT ARG(R) LEU(L) 003685 00000 ------------ - 0.98 0.98 0.98 + 0.02 0.02 0.02 0000 --- --- --- --- 003739 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003782 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003786 00000 ------------ C 0.84 0.61 0.73 T 0.16 0.39 0.27 0000 --- --- --- --- 004007 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 004141 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 004256 00000 ------------ G 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 004348 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 004367 00000 ------------ A 0.94 0.98 0.96 G 0.06 0.02 0.04 0000 --- --- --- --- 004402 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004553 00000 ------------ G 0.83 0.61 0.73 T 0.17 0.39 0.27 0000 --- --- --- --- 004646 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 004656 00000 ------------ G 0.92 0.78 0.85 T 0.08 0.22 0.15 0000 --- --- --- --- 004731 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 004964 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 005468 00000 ------------ A 0.95 0.98 0.97 G 0.05 0.02 0.03 0000 --- --- --- --- 005487 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 005568 00541 SYNON C 0.97 1.00 0.99 T 0.03 0.00 0.01 0098 TGC TGT CYS(C) CYS(C) 006456 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 006932 00000 ------------ C 1.00 0.91 0.96 G 0.00 0.09 0.04 0000 --- --- --- --- 007024 00000 ------------ - 0.04 0.22 0.13 + 0.96 0.78 0.87 0000 --- --- --- --- 007038 00000 ------------ T 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 007460 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 007699 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 007960 00000 ------------ T 0.75 0.76 0.76 C 0.25 0.24 0.24 0000 --- --- --- --- 008835 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008878 00000 ------------ A 0.75 0.71 0.73 T 0.25 0.29 0.27 0000 --- --- --- --- 009182 00000 ------------ T 0.98 0.95 0.96 G 0.02 0.05 0.04 0000 --- --- --- --- 009194 00000 ------------ C 0.66 0.64 0.65 T 0.34 0.36 0.35 0000 --- --- --- --- 009533 00000 ------------ C 0.66 0.64 0.65 G 0.34 0.36 0.35 0000 --- --- --- --- 009539 00000 ------------ C 0.73 0.77 0.75 T 0.27 0.23 0.25 0000 --- --- --- --- 010014 00000 ------------ C 0.75 0.75 0.75 T 0.25 0.25 0.25 0000 --- --- --- --- 010039 00000 ------------ G 0.75 0.75 0.75 T 0.25 0.25 0.25 0000 --- --- --- --- 010201 00000 ------------ C 0.75 0.75 0.75 A 0.25 0.25 0.25 0000 --- --- --- --- 010451 00000 ------------ A 0.98 0.93 0.95 G 0.02 0.07 0.05 0000 --- --- --- --- 010558 00000 ------------ T 0.76 0.78 0.77 C 0.24 0.23 0.23 0000 --- --- --- --- 010744 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 010804 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 010875 00000 ------------ G 0.75 0.80 0.77 C 0.25 0.20 0.23 0000 --- --- --- --- 011005 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 011019 00000 ------------ C 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 011053 00000 ------------ - 0.25 0.20 0.23 + 0.75 0.80 0.77 0000 --- --- --- --- 011100 00000 ------------ A 0.76 0.80 0.78 G 0.24 0.20 0.22 0000 --- --- --- --- 011389 00000 ------------ G 1.00 0.80 0.89 A 0.00 0.20 0.11 0000 --- --- --- --- 011650 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 011714 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 011865 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012337 00000 ------------ A 0.75 0.76 0.76 G 0.25 0.24 0.24 0000 --- --- --- --- 012416 00000 ------------ A 0.78 0.78 0.78 C 0.23 0.23 0.23 0000 --- --- --- --- 012489 00000 ------------ - 0.78 0.72 0.75 + 0.23 0.28 0.25 0000 --- --- --- --- 012806 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 012942 00000 ------------ C 0.70 0.53 0.62 T 0.30 0.47 0.38 0000 --- --- --- --- 013172 00000 ------------ T 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 013377 00000 ------------ G 0.74 0.79 0.76 A 0.26 0.21 0.24 0000 --- --- --- --- 013776 00000 ------------ T 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 013997 00000 ------------ G 0.75 0.83 0.79 T 0.25 0.17 0.21 0000 --- --- --- --- 014246 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014274 00000 ------------ A 0.73 0.83 0.78 G 0.27 0.17 0.22 0000 --- --- --- --- 014317 00000 ------------ T 0.73 0.83 0.78 C 0.27 0.17 0.22 0000 --- --- --- --- 015259 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 015296 00000 ------------ A 0.73 0.78 0.76 G 0.27 0.22 0.24 0000 --- --- --- --- 015702 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 015767 00000 ------------ - 0.27 0.22 0.24 + 0.73 0.78 0.76 0000 --- --- --- --- 015921 00000 ------------ - 0.73 0.78 0.76 + 0.27 0.22 0.24 0000 --- --- --- --- 016033 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 016162 00000 ------------ A 0.83 0.80 0.82 G 0.17 0.20 0.18 0000 --- --- --- --- 016198 00000 ------------ - 0.27 0.45 0.36 + 0.73 0.55 0.64 0000 --- --- --- --- 016350 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016400 00000 ------------ G 0.73 0.80 0.76 A 0.27 0.20 0.24 0000 --- --- --- --- 016407 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016470 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 016620 00000 ------------ T 0.73 0.80 0.76 A 0.27 0.20 0.24 0000 --- --- --- --- 016692 00000 ------------ G 0.65 0.66 0.65 A 0.35 0.34 0.35 0000 --- --- --- --- 016938 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 016957 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 017035 00000 ------------ T 0.73 0.82 0.77 C 0.27 0.18 0.23 0000 --- --- --- --- 017178 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017257 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017469 00000 ------------ C 0.83 0.82 0.83 T 0.17 0.18 0.17 0000 --- --- --- --- 017533 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017607 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018185 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 018218 00000 ------------ G 0.73 0.80 0.76 A 0.27 0.20 0.24 0000 --- --- --- --- 018266 00000 ------------ A 0.73 0.78 0.76 G 0.27 0.22 0.24 0000 --- --- --- --- 018530 00000 ------------ G 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 018943 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 020407 00000 ------------ G 0.93 0.98 0.96 A 0.07 0.02 0.04 0000 --- --- --- --- 020710* 020891 00000 ------------ G 0.78 0.79 0.78 A 0.22 0.21 0.22 0000 --- --- --- --- 021622 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 021860 00000 ------------ T 0.96 0.97 0.97 C 0.04 0.03 0.03 0000 --- --- --- --- 021897 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 021956 00000 ------------ C 1.00 0.90 0.95 T 0.00 0.10 0.05 0000 --- --- --- --- 022018 00000 ------------ A 0.83 0.54 0.68 C 0.17 0.46 0.32 0000 --- --- --- --- 022900 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 023059 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 023429 00000 ------------ C 0.73 0.57 0.65 A 0.27 0.43 0.35 0000 --- --- --- --- 023445 00000 ------------ A 0.90 0.98 0.93 C 0.10 0.02 0.07 0000 --- --- --- --- 023818 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 024033 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 024034 00000 ------------ A 0.83 0.78 0.81 G 0.17 0.22 0.19 0000 --- --- --- --- 024051 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 024172 00000 ------------ T 0.96 0.78 0.87 C 0.04 0.22 0.13 0000 --- --- --- --- 025029 00000 ------------ G 0.91 0.97 0.94 C 0.09 0.03 0.06 0000 --- --- --- --- 025302 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 025369 00000 ------------ A 0.90 0.76 0.83 T 0.10 0.24 0.17 0000 --- --- --- --- 025475 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 026671 00000 ------------ G 0.89 0.95 0.92 A 0.11 0.05 0.08 0000 --- --- --- --- 026810 00000 ------------ G 0.74 0.79 0.76 A 0.26 0.21 0.24 0000 --- --- --- --- 027063 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 027093 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 027195 00000 ------------ G 0.96 0.78 0.87 A 0.04 0.22 0.13 0000 --- --- --- --- 027196 00000 ------------ G 0.73 0.78 0.76 T 0.27 0.22 0.24 0000 --- --- --- --- 027753 00000 ------------ A 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 028049 00000 ------------ T 0.85 0.61 0.73 C 0.15 0.39 0.27 0000 --- --- --- --- 028338 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 028426 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 028461 00000 ------------ G 0.96 0.77 0.87 A 0.04 0.23 0.13 0000 --- --- --- --- 028975 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 029107 00000 ------------ C 0.68 0.66 0.67 T 0.32 0.34 0.33 0000 --- --- --- --- 029179 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 029252 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 030700 00000 ------------ G 0.95 0.98 0.97 A 0.05 0.02 0.03 0000 --- --- --- --- 030809 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 030941 00000 ------------ C 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 031167 00000 ------------ T 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 031357 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 031525 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 031865 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 032169 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 032214 00000 ------------ T 0.81 1.00 0.90 C 0.19 0.00 0.10 0000 --- --- --- --- 033043 00000 ------------ G 0.73 0.57 0.65 A 0.27 0.43 0.35 0000 --- --- --- --- 033229 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 033371 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 033664 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 033687 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 034266 00000 ------------ G 0.86 0.76 0.81 A 0.14 0.24 0.19 0000 --- --- --- --- 034418 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 034688 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 034727 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 034958 00000 ------------ G 0.72 0.57 0.64 A 0.28 0.43 0.36 0000 --- --- --- --- 035714 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 035901 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 036132 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 036134 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 036140 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 036241 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 036412 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 036695 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 036900 00000 ------------ C 0.74 0.57 0.65 T 0.26 0.43 0.35 0000 --- --- --- --- 037249 00000 ------------ T 0.73 0.57 0.65 G 0.27 0.43 0.35 0000 --- --- --- --- 037401 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 038451 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 038491 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 038496 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 038600 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 038713 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 038879 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 038950 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 039720 00000 ------------ A 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 039959 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 040091 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 040720 01484 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 040829 01593 3' UTR A 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 041043 01807 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 041132 01896 3' UTR G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 041597 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 041937 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 042135 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 042353 00000 ------------ G 0.71 0.39 0.55 A 0.29 0.61 0.45 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002124: CTTCCCCTCCTTCCCTAGTTA 002522: A 003685: TA 007024: AATT 007460: TATAAA 011053: C 012489: CA 015767: AA 015921: TCTTTAC 016198: TAGTT 023059: T 025302: TTTCT 031357: TT 034727: AA 038491: TA The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 020710 A 0.10 0.00 0.05 C 0.83 1.00 0.91 T 0.06 0.00 0.03 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000100 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 000386 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001171 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 001185 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 001187 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 001385 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 001909 00000 ------------ - 0.19 0.00 0.10 + 0.81 1.00 0.90 0000 --- --- --- --- 001933 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002248 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 002313 00000 ------------ G 0.70 0.98 0.84 C 0.30 0.02 0.16 0000 --- --- --- --- 002371 00000 ------------ A 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 002474 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002785 00000 ------------ C 0.68 0.98 0.83 G 0.32 0.02 0.17 0000 --- --- --- --- 002800 00000 ------------ A 0.68 0.98 0.83 T 0.32 0.02 0.17 0000 --- --- --- --- 002820 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003026 00000 ------------ A 0.68 0.98 0.83 T 0.32 0.02 0.17 0000 --- --- --- --- 003079 00000 ------------ G 0.57 0.98 0.77 T 0.43 0.02 0.23 0000 --- --- --- --- 004405 00000 ------------ - 0.62 0.97 0.80 + 0.38 0.03 0.20 0000 --- --- --- --- 004802 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 004890 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005171 00000 ------------ G 0.71 0.98 0.84 C 0.29 0.02 0.16 0000 --- --- --- --- 005334 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 005427 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 005500 00000 ------------ C 0.61 0.98 0.79 T 0.39 0.02 0.21 0000 --- --- --- --- 005698 00000 ------------ C 0.87 1.00 0.94 T 0.13 0.00 0.06 0000 --- --- --- --- 005819 00000 ------------ G 0.61 0.98 0.78 A 0.39 0.02 0.22 0000 --- --- --- --- 005830 00000 ------------ T 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 006367 00000 ------------ T 0.57 0.98 0.78 A 0.43 0.02 0.22 0000 --- --- --- --- 006398 00000 ------------ - 0.11 0.00 0.05 + 0.89 1.00 0.95 0000 --- --- --- --- 006975 00000 ------------ T 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 007148 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 007628 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 007901 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 008022 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 009447 00000 ------------ T 0.71 0.98 0.84 C 0.29 0.02 0.16 0000 --- --- --- --- 009454 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009939 00000 ------------ T 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 010327 00000 ------------ T 0.41 0.98 0.70 C 0.59 0.02 0.30 0000 --- --- --- --- 010360 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 010434 00000 ------------ G 0.54 0.98 0.76 A 0.46 0.02 0.24 0000 --- --- --- --- 010473 00000 ------------ C 0.78 0.98 0.88 T 0.22 0.02 0.12 0000 --- --- --- --- 011648 00000 ------------ - 0.11 0.00 0.05 + 0.89 1.00 0.95 0000 --- --- --- --- 011738 00000 ------------ A 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 011985 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 012146 00000 ------------ - 0.09 0.00 0.05 + 0.91 1.00 0.95 0000 --- --- --- --- 012199 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 012504 00000 ------------ - 0.91 1.00 0.95 + 0.09 0.00 0.05 0000 --- --- --- --- 012542 00000 ------------ A 0.68 0.98 0.83 G 0.32 0.02 0.17 0000 --- --- --- --- 012709 00000 ------------ A 0.92 0.98 0.95 C 0.08 0.02 0.05 0000 --- --- --- --- 012893 00000 ------------ C 0.75 1.00 0.87 T 0.25 0.00 0.13 0000 --- --- --- --- 012996 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 013314 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013317 00000 ------------ C 0.29 0.73 0.50 T 0.71 0.27 0.50 0000 --- --- --- --- 013684 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 013738 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 013755 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 013884 00000 ------------ G 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 013913 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013960 00000 ------------ G 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 014176 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 015035 00000 ------------ T 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 015118 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015430 00000 ------------ - 0.17 0.32 0.24 + 0.83 0.68 0.76 0000 --- --- --- --- 015461 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 015749 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 016143 00000 ------------ C 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 016189 00000 ------------ A 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 016242 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 016329 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 016532 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 016633 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016723 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 017069 00000 ------------ G 0.75 1.00 0.88 A 0.25 0.00 0.12 0000 --- --- --- --- 017334 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017452 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 017699 00000 ------------ T 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 017954 00000 ------------ A 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 018105 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 018190 00000 ------------ T 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 018193 00000 ------------ C 0.67 1.00 0.81 T 0.33 0.00 0.19 0000 --- --- --- --- 018377 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018563 00000 ------------ G 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 018874 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 019037 00000 ------------ C 0.29 0.73 0.50 T 0.71 0.27 0.50 0000 --- --- --- --- 019199 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 019326 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019567 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 019810 00481 SYNON C 0.89 1.00 0.94 T 0.11 0.00 0.06 0094 ACC ACT THR(T) THR(T) 020222 00000 ------------ T 0.88 0.71 0.78 C 0.12 0.29 0.22 0000 --- --- --- --- 020227 00000 ------------ T 0.87 0.68 0.76 C 0.13 0.32 0.24 0000 --- --- --- --- 020306 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 020477 00000 ------------ T 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 020940 00000 ------------ A 0.31 0.74 0.55 G 0.69 0.26 0.45 0000 --- --- --- --- 020963 00000 ------------ A 0.81 1.00 0.91 C 0.19 0.00 0.09 0000 --- --- --- --- 021156 00000 ------------ T 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 021169 00000 ------------ T 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 021330 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 021502 00000 ------------ G 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 021504 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 021587 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 021689 00000 ------------ C 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 021766 00000 ------------ G 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 021797 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 021918 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 022475 00000 ------------ T 0.65 1.00 0.82 C 0.35 0.00 0.18 0000 --- --- --- --- 023099 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 023135 00000 ------------ A 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 023505 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 023647 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 023689 00000 ------------ T 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 024062 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 024743 00000 ------------ T 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 024966 00000 ------------ A 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 025077 00000 ------------ G 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 025211 00000 ------------ G 0.80 0.97 0.88 A 0.20 0.03 0.12 0000 --- --- --- --- 025363 00000 ------------ G 0.97 0.97 0.97 A 0.03 0.03 0.03 0000 --- --- --- --- 026320 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 026576 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026691 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 026725 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 026936 00000 ------------ T 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 027403 00000 ------------ A 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 027779 00000 ------------ G 0.92 1.00 0.95 A 0.08 0.00 0.05 0000 --- --- --- --- 027798 00000 ------------ C 0.97 1.00 0.98 T 0.03 0.00 0.02 0000 --- --- --- --- 027969 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 028054 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 028395 00000 ------------ G 0.70 1.00 0.86 A 0.30 0.00 0.14 0000 --- --- --- --- 028717 00000 ------------ T 0.71 1.00 0.85 G 0.29 0.00 0.15 0000 --- --- --- --- 029163 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 029366 00000 ------------ C 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 029585 00000 ------------ C 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 030104 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 030252 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 030451 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 030542 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 030555 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 030799 00000 ------------ T 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 030895 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 031002 00000 ------------ - 0.09 0.00 0.05 + 0.91 1.00 0.95 0000 --- --- --- --- 031062 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 031208 00000 ------------ T 0.70 1.00 0.85 C 0.30 0.00 0.15 0000 --- --- --- --- 031248 00000 ------------ A 0.80 1.00 0.90 G 0.20 0.00 0.10 0000 --- --- --- --- 031322 00902 SYNON A 0.91 1.00 0.96 C 0.09 0.00 0.04 0235 AGA CGA ARG(R) ARG(R) 031408 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 031648 00000 ------------ A 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 031725 00000 ------------ T 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 032479 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 032744 01002 NON-SYN C 0.90 1.00 0.94 T 0.10 0.00 0.06 0268 ACG ATG THR(T) MET(M) 033291 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 033328 00000 ------------ G 0.82 1.00 0.91 A 0.18 0.00 0.09 0000 --- --- --- --- 033379 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 033617 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 033630 00000 ------------ T 0.75 1.00 0.88 G 0.25 0.00 0.12 0000 --- --- --- --- 034036 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 034426 00000 ------------ A 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 034434 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 034589 00000 ------------ T 0.71 1.00 0.85 C 0.29 0.00 0.15 0000 --- --- --- --- 034607 00000 ------------ G 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 034608 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 035725 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 035730* 036245 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 036262 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 036859 00000 ------------ A 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 036870 00000 ------------ T 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 037085 00000 ------------ A 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 037093 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 037311 00000 ------------ G 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 037319 00000 ------------ A 0.89 0.97 0.93 G 0.11 0.03 0.07 0000 --- --- --- --- 037825 00000 ------------ G 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 038154* 038473 01330 3' UTR A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 038582 01439 3' UTR C 0.76 0.98 0.88 T 0.24 0.02 0.12 0000 --- --- --- --- 038612 01469 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 038742 01599 3' UTR C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 039263 00000 ------------ G 0.81 1.00 0.90 A 0.19 0.00 0.10 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001909: A 004405: T 005427: CAAAATAATTGTGGTAGGAT 006398: TCT 011648: CTTTGTAGACT 012146: A 012504: A 015430: ATTA 031002: TCT The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 035730 A 0.69 1.00 0.84 G 0.29 0.00 0.15 T 0.02 0.00 0.01 038154 A 0.65 0.96 0.80 G 0.33 0.00 0.16 T 0.02 0.04 0.03 Site CDNA-Pos Description Allele1 -freq ED-freq Total-freq Allele2 ED-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000638 00000 ------------ C 0.50 0.68 0.59 T 0.50 0.32 0.41 0000 --- --- --- --- 002202 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 002288 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003425 00000 ------------ G 0.85 0.68 0.77 A 0.15 0.32 0.23 0000 --- --- --- --- 003572 00000 ------------ G 0.77 0.64 0.71 C 0.23 0.36 0.29 0000 --- --- --- --- 003583 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003714 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004175 00422 NON-SYN G 0.90 1.00 0.95 T 0.10 0.00 0.05 0108 GGA GTA GLY(G) VAL(V) 004202 00449 NON-SYN C 0.92 1.00 0.96 T 0.08 0.00 0.04 0117 ACC ATC THR(T) ILE(I) 004230 00477 SYNON T 0.75 0.70 0.73 C 0.25 0.30 0.27 0126 TAT TAC TYR(Y) TYR(Y) 004257 00504 NON-SYN C 0.98 1.00 0.99 A 0.02 0.00 0.01 0135 GAC GAA ASP(D) GLU(E) 004418 00665 NON-SYN C 1.00 0.98 0.99 T 0.00 0.02 0.01 0189 ACG ATG THR(T) MET(M) 004476 00723 SYNON C 0.78 0.68 0.73 T 0.22 0.32 0.27 0208 CTC CTT LEU(L) LEU(L) 004645 00892 NON-SYN G 0.75 0.68 0.72 A 0.25 0.32 0.28 0265 GAC AAC ASP(D) ASN(N) 007061 00000 ------------ C 0.85 0.70 0.78 T 0.15 0.30 0.22 0000 --- --- --- --- 007279 00000 ------------ T 0.56 0.68 0.62 C 0.44 0.32 0.38 0000 --- --- --- --- 007370 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007388 00000 ------------ T 0.77 0.67 0.72 C 0.23 0.33 0.28 0000 --- --- --- --- 007476 00000 ------------ A 0.77 0.67 0.72 G 0.23 0.33 0.28 0000 --- --- --- --- 007484 00000 ------------ T 1.00 0.85 0.93 C 0.00 0.15 0.07 0000 --- --- --- --- 007497 00000 ------------ C 0.77 0.70 0.73 T 0.23 0.30 0.27 0000 --- --- --- --- 007960 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012879 00000 ------------ C 0.85 0.66 0.76 T 0.15 0.34 0.24 0000 --- --- --- --- 013134 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 015732 00997 NON-SYN C 0.91 0.83 0.87 G 0.09 0.17 0.13 0300 CTC GTC LEU(L) VAL(V) 016417 00000 ------------ C 0.98 0.85 0.91 T 0.02 0.15 0.09 0000 --- --- --- --- 016520 00000 ------------ - 0.40 0.50 0.45 + 0.60 0.50 0.55 0000 --- --- --- --- NOTE: ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 016520: T Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000361 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000489 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000523 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000823 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 001131 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001158 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001338 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 001525 00000 ------------ T 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 001549 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001726 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 001962 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 002006 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002077 00000 ------------ - 0.06 0.00 0.03 + 0.94 1.00 0.97 0000 --- --- --- --- 002460 00000 ------------ C 0.94 0.94 0.94 T 0.06 0.06 0.06 0000 --- --- --- --- 002500 00000 ------------ A 0.67 1.00 0.84 C 0.33 0.00 0.16 0000 --- --- --- --- 002565 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 002674 00000 ------------ A 0.22 0.82 0.53 G 0.78 0.18 0.47 0000 --- --- --- --- 002873 00000 ------------ C 0.97 0.94 0.96 T 0.03 0.06 0.04 0000 --- --- --- --- 003003 00054 5' UTR G 0.95 0.96 0.95 A 0.05 0.04 0.05 0000 --- --- --- --- 003369 00000 ------------ C 0.64 1.00 0.80 T 0.36 0.00 0.20 0000 --- --- --- --- 003450 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003675 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003775 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 003822 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003916 00000 ------------ T 0.86 0.79 0.83 C 0.14 0.21 0.17 0000 --- --- --- --- 004010 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004061 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 004272 00000 ------------ A 0.96 0.80 0.88 G 0.04 0.20 0.12 0000 --- --- --- --- 004405 00000 ------------ G 0.70 0.98 0.84 A 0.30 0.02 0.16 0000 --- --- --- --- 004447 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 004506 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004554 00000 ------------ C 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 004750 00000 ------------ A 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 004753 00000 ------------ T 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 004972 00000 ------------ C 0.67 0.98 0.82 G 0.33 0.02 0.18 0000 --- --- --- --- 005003 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 005030 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 005046 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 005378 00000 ------------ G 0.73 0.26 0.50 A 0.27 0.74 0.50 0000 --- --- --- --- 005581 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 006079 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 006551 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 006565 00000 ------------ T 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 006761 00000 ------------ G 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 007038 00000 ------------ - 0.55 1.00 0.77 + 0.45 0.00 0.23 0000 --- --- --- --- 007119 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 007164 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 007314 00000 ------------ T 0.95 0.97 0.96 C 0.05 0.03 0.04 0000 --- --- --- --- 007429 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007873 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 008265 00000 ------------ C 0.55 1.00 0.77 T 0.45 0.00 0.23 0000 --- --- --- --- 008337 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 008447 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008482 00000 ------------ A 0.55 1.00 0.76 G 0.45 0.00 0.24 0000 --- --- --- --- 009023 00407 5' UTR G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 009118 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 009218 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 009234 00000 ------------ - 0.47 0.00 0.24 + 0.53 1.00 0.76 0000 --- --- --- --- 009291 00000 ------------ G 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 009533 00000 ------------ C 0.53 1.00 0.78 A 0.47 0.00 0.22 0000 --- --- --- --- 009968 00522 5' UTR C 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 010182 00000 ------------ A 0.97 0.98 0.97 G 0.03 0.02 0.03 0000 --- --- --- --- 010304 00000 ------------ A 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 010317 00000 ------------ C 0.84 1.00 0.93 A 0.16 0.00 0.07 0000 --- --- --- --- 010789 00000 ------------ A 0.98 0.96 0.97 G 0.02 0.04 0.03 0000 --- --- --- --- 010833 00000 ------------ G 0.84 1.00 0.92 C 0.16 0.00 0.08 0000 --- --- --- --- 010866 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010914 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 010924 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 011423 00000 ------------ C 0.89 1.00 0.95 T 0.11 0.00 0.05 0000 --- --- --- --- 011509 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 011809 00000 ------------ T 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 011987 01045 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0084 GGG GGA GLY(G) GLY(G) 012054 01112 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0107 GGC AGC GLY(G) SER(S) 012143 01201 SYNON C 0.92 1.00 0.96 T 0.08 0.00 0.04 0136 CGC CGT ARG(R) ARG(R) 012185 01243 SYNON C 0.94 1.00 0.97 A 0.06 0.00 0.03 0150 CCC CCA PRO(P) PRO(P) 012535 01593 NON-SYN C 0.97 1.00 0.99 G 0.03 0.00 0.01 0267 CCC CGC PRO(P) ARG(R) 012666 00000 ------------ G 0.97 0.97 0.97 A 0.03 0.03 0.03 0000 --- --- --- --- 012868 00000 ------------ T 0.41 0.98 0.69 C 0.59 0.02 0.31 0000 --- --- --- --- 012980 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 013385 01718 NON-SYN T 0.93 1.00 0.96 G 0.07 0.00 0.04 0309 TCT GCT SER(S) ALA(A) 013432 01765 SYNON C 1.00 0.98 0.99 T 0.00 0.02 0.01 0324 CAC CAT HIS(H) HIS(H) 013676 00000 ------------ C 0.79 1.00 0.90 G 0.21 0.00 0.10 0000 --- --- --- --- 013687 00000 ------------ - 0.97 1.00 0.99 + 0.03 0.00 0.01 0000 --- --- --- --- 014242 00000 ------------ C 0.95 0.98 0.96 T 0.05 0.02 0.04 0000 --- --- --- --- 014289 00000 ------------ C 0.87 1.00 0.94 T 0.13 0.00 0.06 0000 --- --- --- --- 014404 02244 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0484 CGG CAG ARG(R) GLN(Q) 014649 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 014986 00000 ------------ G 0.56 0.98 0.77 A 0.44 0.02 0.23 0000 --- --- --- --- 015403 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 015517 02518 SYNON G 0.95 1.00 0.98 A 0.05 0.00 0.02 0575 CCG CCA PRO(P) PRO(P) 015779 00000 ------------ G 0.88 0.98 0.93 A 0.12 0.02 0.07 0000 --- --- --- --- 015797 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 015852 00000 ------------ G 0.97 0.98 0.98 A 0.03 0.02 0.02 0000 --- --- --- --- 015854 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 015875 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 015908 02635 SYNON G 0.95 1.00 0.98 A 0.05 0.00 0.02 0614 ACG ACA THR(T) THR(T) 016295 00000 ------------ G 0.79 0.40 0.59 C 0.21 0.60 0.41 0000 --- --- --- --- 016503 02908 SYNON C 0.87 1.00 0.94 T 0.13 0.00 0.06 0705 GCC GCT ALA(A) ALA(A) 016609 03014 SYNON C 0.97 1.00 0.99 T 0.03 0.00 0.01 0741 CTG TTG LEU(L) LEU(L) 016733 00000 ------------ G 0.61 0.98 0.79 A 0.39 0.02 0.21 0000 --- --- --- --- 016773 00000 ------------ C 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 016777 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 016793 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 016794 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 016817 00000 ------------ - 0.45 0.98 0.72 + 0.55 0.02 0.28 0000 --- --- --- --- 017050 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 017360 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 018076 00000 ------------ A 0.46 0.98 0.72 G 0.54 0.02 0.28 0000 --- --- --- --- 018652 00000 ------------ G 0.86 0.98 0.92 A 0.14 0.02 0.08 0000 --- --- --- --- 018907 03930 3' UTR - 0.29 0.02 0.15 + 0.71 0.98 0.85 0000 --- --- --- --- 018981 04004 3' UTR A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 019012 00000 ------------ A 0.48 0.98 0.73 G 0.52 0.02 0.27 0000 --- --- --- --- 019068 00000 ------------ T 0.70 0.98 0.84 C 0.30 0.02 0.16 0000 --- --- --- --- 019497 00000 ------------ - 0.11 0.00 0.06 + 0.89 1.00 0.94 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001726: TACT 002077: AACCC 007038: CCTTT 009234: CCTATAGTTT 013687: TTCC 016777: TC 016817: CT 017050: TGGGGACACAGCCT 018907: C 019497: C Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000463 00000 ------------ A 1.00 0.89 0.95 G 0.00 0.11 0.05 0000 --- --- --- --- 000696 00000 ------------ T 0.74 0.80 0.77 C 0.26 0.20 0.23 0000 --- --- --- --- 001427 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 001431 00000 ------------ T 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 001720 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001891 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 002145 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002505 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 002582 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 002714 00000 ------------ - 0.00 0.14 0.07 + 1.00 0.86 0.93 0000 --- --- --- --- 003346 00000 ------------ T 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 004307 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 005098 00000 ------------ G 1.00 0.87 0.93 A 0.00 0.13 0.07 0000 --- --- --- --- 005400 00000 ------------ C 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 005725 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006477 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 006777 00165 5' UTR G 0.50 0.83 0.66 A 0.50 0.17 0.34 0000 --- --- --- --- 006789 00177 NON-SYN C 0.89 1.00 0.95 T 0.11 0.00 0.05 0004 GCG GTG ALA(A) VAL(V) 006832 00220 SYNON C 0.96 0.89 0.92 T 0.04 0.11 0.08 0018 CTC CTT LEU(L) LEU(L) 006854 00242 NON-SYN C 1.00 0.83 0.91 T 0.00 0.17 0.09 0026 CAT TAT HIS(H) TYR(Y) 007013 00000 ------------ G 0.70 0.57 0.63 T 0.30 0.43 0.37 0000 --- --- --- --- 007231 00385 SYNON C 0.96 1.00 0.98 T 0.04 0.00 0.02 0073 CGC CGT ARG(R) ARG(R) 007741 00000 ------------ T 1.00 0.79 0.90 G 0.00 0.21 0.10 0000 --- --- --- --- 008237 00000 ------------ A 0.81 0.84 0.83 T 0.19 0.16 0.17 0000 --- --- --- --- 008324 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 008438 00000 ------------ T 0.90 0.87 0.88 C 0.10 0.13 0.12 0000 --- --- --- --- 008607 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 008726 00000 ------------ T 0.62 0.50 0.56 C 0.38 0.50 0.44 0000 --- --- --- --- 008735 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008790 00000 ------------ C 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 008853 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008937 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 009022 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 009119 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009313 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 009467 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 009497 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 009530 00000 ------------ C 0.93 0.93 0.93 T 0.07 0.07 0.07 0000 --- --- --- --- 010494 00000 ------------ C 0.56 0.70 0.63 T 0.44 0.30 0.37 0000 --- --- --- --- 010612 00000 ------------ - 0.17 0.00 0.09 + 0.83 1.00 0.91 0000 --- --- --- --- 010912 00000 ------------ T 0.82 0.93 0.88 C 0.18 0.07 0.12 0000 --- --- --- --- 011245 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 011252 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 011322 00000 ------------ C 0.57 0.78 0.67 T 0.43 0.22 0.33 0000 --- --- --- --- 011540 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 011580 00000 ------------ G 0.79 0.83 0.81 C 0.21 0.17 0.19 0000 --- --- --- --- 011584 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 011681 00000 ------------ - 0.46 0.61 0.53 + 0.54 0.39 0.47 0000 --- --- --- --- 012113 00000 ------------ G 1.00 0.93 0.96 A 0.00 0.07 0.04 0000 --- --- --- --- 012152 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 012706 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 012834 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 012908 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 013050 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013174 00000 ------------ A 0.93 0.82 0.88 T 0.07 0.18 0.12 0000 --- --- --- --- 013630 00000 ------------ C 0.70 0.59 0.64 G 0.30 0.41 0.36 0000 --- --- --- --- 013775 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014024 00000 ------------ G 0.96 0.85 0.90 C 0.04 0.15 0.10 0000 --- --- --- --- 014074 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014195 00000 ------------ G 0.87 0.79 0.83 A 0.13 0.21 0.17 0000 --- --- --- --- 014239 00000 ------------ T 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 014632 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 014700 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 014733 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 014746 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 014833 00000 ------------ A 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 014895 00000 ------------ G 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 014936 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015027 00000 ------------ C 0.93 0.87 0.90 A 0.07 0.13 0.10 0000 --- --- --- --- 015284 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 015300 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 015580 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 015660 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 015679 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 015805 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 016069 00000 ------------ - 0.04 0.20 0.12 + 0.96 0.80 0.88 0000 --- --- --- --- 016412 00000 ------------ G 0.85 0.77 0.82 A 0.15 0.23 0.18 0000 --- --- --- --- 016787 00000 ------------ G 0.86 0.82 0.84 A 0.14 0.18 0.16 0000 --- --- --- --- 017159 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017681 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 017839 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 018291 00000 ------------ G 0.80 0.78 0.79 A 0.20 0.22 0.21 0000 --- --- --- --- 018483 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 018813 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 018909 00941 NON-SYN T 0.96 1.00 0.98 C 0.04 0.00 0.02 0259 TGT CGT CYS(C) ARG(R) 018922 00954 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0263 GGA GAA GLY(G) GLU(E) 019022 01054 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0296 GAG GAA GLU(E) GLU(E) 019826 01858 3' UTR A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 019868 01900 3' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 019890 01922 3' UTR A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 020026 02058 3' UTR C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 020043 02075 3' UTR - 0.42 0.35 0.38 + 0.58 0.65 0.62 0000 --- --- --- --- 020208 02239 3' UTR A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 020502 02533 3' UTR C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020625 02656 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020685 02716 3' UTR T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 020849 02880 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 020987 03018 3' UTR A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 021089 03120 3' UTR A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 021299 03330 3' UTR A 0.93 0.85 0.89 G 0.07 0.15 0.11 0000 --- --- --- --- 021443 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 021639 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 021642 00000 ------------ T 0.85 0.76 0.81 C 0.15 0.24 0.19 0000 --- --- --- --- 021707 00000 ------------ T 0.85 0.75 0.80 G 0.15 0.25 0.20 0000 --- --- --- --- 021757 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 021825 00000 ------------ A 0.92 0.86 0.89 G 0.08 0.14 0.11 0000 --- --- --- --- 022223 00000 ------------ A 0.90 0.88 0.89 G 0.10 0.12 0.11 0000 --- --- --- --- 022225 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022254 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 022454 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022586 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 022818 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022827 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 023168 00000 ------------ G 0.96 0.82 0.89 C 0.04 0.18 0.11 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001427: ATTGT 001891: AG 002505: AT 002714: T 010612: C 011681: CC 012152: C 016069: AACA 020043: T 021639: ATATA 022254: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000152 00000 ------------ G 1.00 0.90 0.96 C 0.00 0.10 0.04 0000 --- --- --- --- 000167 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000370 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000577 00000 ------------ C 0.90 0.43 0.67 T 0.10 0.57 0.33 0000 --- --- --- --- 000671 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000713 00000 ------------ T 0.81 0.96 0.88 C 0.19 0.04 0.12 0000 --- --- --- --- 000851 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000866 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 000880 00000 ------------ G 1.00 0.90 0.95 C 0.00 0.10 0.05 0000 --- --- --- --- 001116 00000 ------------ - 0.80 0.77 0.79 + 0.20 0.23 0.21 0000 --- --- --- --- 001169 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 001319 00000 ------------ - 0.73 0.41 0.57 + 0.27 0.59 0.43 0000 --- --- --- --- 001449 00000 ------------ T 0.62 0.41 0.52 C 0.38 0.59 0.48 0000 --- --- --- --- 001451 00000 ------------ C 0.88 0.46 0.67 A 0.12 0.54 0.33 0000 --- --- --- --- 001612 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001632 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001731 -----** SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0020 CTC CTT LEU(L) LEU(L) 002011 00000 ------------ A 0.79 0.76 0.78 G 0.21 0.24 0.22 0000 --- --- --- --- 002456 00000 ------------ C 0.94 1.00 0.96 A 0.06 0.00 0.04 0000 --- --- --- --- 002527 00000 ------------ T 0.83 1.00 0.88 C 0.17 0.00 0.12 0000 --- --- --- --- 002757 00000 ------------ C 0.95 1.00 0.96 G 0.05 0.00 0.04 0000 --- --- --- --- 003715 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 003740 00000 ------------ A 0.54 0.67 0.61 G 0.46 0.33 0.39 0000 --- --- --- --- 003977 00000 ------------ G 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 004100 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 004544 00000 ------------ T 0.70 0.95 0.81 C 0.30 0.05 0.19 0000 --- --- --- --- 005128 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 005300 00000 ------------ A 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 005413 00000 ------------ T 0.85 0.89 0.87 C 0.15 0.11 0.13 0000 --- --- --- --- 005521 00000 ------------ G 0.96 0.81 0.89 A 0.04 0.19 0.11 0000 --- --- --- --- 005997 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 006098 00000 ------------ G 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 006110 00000 ------------ G 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 006445 00000 ------------ A 0.95 0.93 0.94 C 0.05 0.07 0.06 0000 --- --- --- --- 006638 00000 ------------ - 0.97 1.00 0.99 + 0.03 0.00 0.01 0000 --- --- --- --- 007437 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 007742 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 007884 00000 ------------ T 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 007885 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 008095 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 008493 00000 ------------ C 0.73 0.74 0.73 T 0.27 0.26 0.27 0000 --- --- --- --- 008518 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008724 00000 ------------ T 0.89 0.89 0.89 G 0.11 0.11 0.11 0000 --- --- --- --- 008910 00000 ------------ G 0.73 0.78 0.76 T 0.27 0.22 0.24 0000 --- --- --- --- 008946 00000 ------------ C 0.54 0.59 0.56 G 0.46 0.41 0.44 0000 --- --- --- --- 009043 00000 ------------ A 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 009091 00000 ------------ A 0.83 0.89 0.86 G 0.17 0.11 0.14 0000 --- --- --- --- 009147 00000 ------------ C 0.92 0.87 0.89 T 0.08 0.13 0.11 0000 --- --- --- --- 009223 00000 ------------ A 0.88 0.89 0.88 G 0.12 0.11 0.12 0000 --- --- --- --- 009501 00000 ------------ G 0.92 0.87 0.89 T 0.08 0.13 0.11 0000 --- --- --- --- 009608 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009709 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 010628 00000 ------------ C 0.93 0.93 0.93 A 0.07 0.07 0.07 0000 --- --- --- --- 010709 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011176 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011450 00000 ------------ G 0.63 0.88 0.74 C 0.37 0.12 0.26 0000 --- --- --- --- 011468 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 011631 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011962 00000 ------------ A 0.57 0.76 0.66 G 0.43 0.24 0.34 0000 --- --- --- --- 012324 00000 ------------ A 0.62 0.76 0.68 G 0.38 0.24 0.32 0000 --- --- --- --- 013457 00000 ------------ A 0.65 0.77 0.71 G 0.35 0.23 0.29 0000 --- --- --- --- 013732 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 013785 00000 ------------ C 0.90 0.90 0.90 T 0.10 0.10 0.10 0000 --- --- --- --- 014036 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 014772 00000 ------------ C 0.48 0.55 0.51 T 0.52 0.45 0.49 0000 --- --- --- --- 014881 00000 ------------ C 0.67 0.80 0.73 T 0.33 0.20 0.27 0000 --- --- --- --- 015123 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 015848 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016047 00000 ------------ T 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 016673 00000 ------------ A 0.47 0.54 0.51 T 0.53 0.46 0.49 0000 --- --- --- --- 016711 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016893 00000 ------------ G 0.73 0.57 0.64 C 0.27 0.43 0.36 0000 --- --- --- --- 016970 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 017257 00000 ------------ C 0.68 0.75 0.71 T 0.33 0.25 0.29 0000 --- --- --- --- 017396 00000 ------------ A 0.63 0.68 0.65 C 0.37 0.33 0.35 0000 --- --- --- --- 018086 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018133 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018352 00000 ------------ G 0.88 0.91 0.90 A 0.12 0.09 0.10 0000 --- --- --- --- 019072 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 019819 -----** NON-SYN G 0.98 0.95 0.97 A 0.02 0.05 0.03 0152 GCC ACC ALA(A) THR(T) 020155 00000 ------------ A 0.98 0.95 0.97 G 0.02 0.05 0.03 0000 --- --- --- --- 020174 00000 ------------ C 0.66 0.77 0.72 T 0.34 0.23 0.28 0000 --- --- --- --- 020477 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 020641 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 021849 00000 ------------ G 0.81 0.91 0.86 A 0.19 0.09 0.14 0000 --- --- --- --- 022067 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022158 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022192 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022476 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 022501 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022607 00000 ------------ T 0.90 0.98 0.93 A 0.10 0.02 0.07 0000 --- --- --- --- 022739 -----** NON-SYN G 0.96 1.00 0.98 A 0.04 0.00 0.02 0192 GGG AGG GLY(G) ARG(R) 023104 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 023305 00000 ------------ G 1.00 0.89 0.95 A 0.00 0.11 0.05 0000 --- --- --- --- 023345 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023665 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023676 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023781 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 023841 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023890 00000 ------------ G 0.83 0.82 0.83 A 0.17 0.17 0.17 0000 --- --- --- --- 024331 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 024465 00000 ------------ G 0.71 0.50 0.61 A 0.29 0.50 0.39 0000 --- --- --- --- 024504 00000 ------------ C 0.97 0.97 0.97 T 0.03 0.03 0.03 0000 --- --- --- --- 024536 00000 ------------ G 0.78 1.00 0.89 A 0.22 0.00 0.11 0000 --- --- --- --- 025262 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 025549 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 025694 00000 ------------ G 0.50 0.85 0.67 A 0.50 0.15 0.33 0000 --- --- --- --- 025763 00000 ------------ G 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 026110 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026242 -----** SYNON T 0.50 0.88 0.68 C 0.50 0.12 0.32 0264 ACT ACC THR(T) THR(T) 026348 00000 ------------ G 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 026405 00000 ------------ G 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 026547 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026578 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 027633 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 028696 00000 ------------ T 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 029136 00000 ------------ C 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- ** Sites are not mapped to the complete CDNA. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001116: C 001319: TGTGAT 006638: AAAG 008095: GA 015123: A 019072: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000198 00000 ------------ G 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 000386 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 000461 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000497 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 000688 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 000696 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 000721 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 000764 00000 ------------ A 0.75 0.63 0.69 T 0.25 0.37 0.31 0000 --- --- --- --- 001428 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001490 00000 ------------ A 0.94 0.65 0.80 G 0.06 0.35 0.20 0000 --- --- --- --- 001491 00000 ------------ T 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 001522 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 001580 00000 ------------ C 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 001735 00000 ------------ C 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 001751 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 001909 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 001927 00000 ------------ - 0.03 0.30 0.19 + 0.97 0.70 0.81 0000 --- --- --- --- 001938 00000 ------------ A 0.93 0.72 0.82 C 0.07 0.28 0.18 0000 --- --- --- --- 002047 00000 ------------ - 0.93 1.00 0.97 + 0.07 0.00 0.03 0000 --- --- --- --- 002262 00000 ------------ C 1.00 0.87 0.93 T 0.00 0.13 0.07 0000 --- --- --- --- 002388 00000 ------------ G 0.52 0.80 0.66 T 0.48 0.20 0.34 0000 --- --- --- --- 002518 00000 ------------ C 0.57 0.80 0.68 G 0.43 0.20 0.32 0000 --- --- --- --- 002780 00120 5' UTR G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 002952 00000 ------------ G 0.75 0.67 0.71 A 0.25 0.33 0.29 0000 --- --- --- --- 003213 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 003428 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 003450 00000 ------------ T 0.96 0.74 0.85 C 0.04 0.26 0.15 0000 --- --- --- --- 003483 00000 ------------ T 0.94 0.63 0.79 G 0.06 0.37 0.21 0000 --- --- --- --- 003532 00000 ------------ - 0.10 0.13 0.12 + 0.90 0.87 0.88 0000 --- --- --- --- 003543 00000 ------------ C 0.67 0.57 0.62 A 0.33 0.43 0.38 0000 --- --- --- --- 004138 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 004197 00000 ------------ G 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 004333 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 004376 00000 ------------ T 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 004685 00000 ------------ A 0.65 0.57 0.61 T 0.35 0.43 0.39 0000 --- --- --- --- 004686 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004717 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 004925 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 004937 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005090 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005096 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005131 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005785 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005798 00000 ------------ G 0.81 1.00 0.90 A 0.19 0.00 0.10 0000 --- --- --- --- 006012 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 006039 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 006117 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 006201 00000 ------------ A 0.94 0.70 0.82 G 0.06 0.30 0.18 0000 --- --- --- --- 006266 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 006515 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 006675 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 006703 00000 ------------ A 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 006783 00000 ------------ G 1.00 0.87 0.94 T 0.00 0.13 0.06 0000 --- --- --- --- 007178 00000 ------------ A 0.73 0.55 0.64 G 0.27 0.45 0.36 0000 --- --- --- --- 007393 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 007675 00000 ------------ T 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 007872 00000 ------------ C 0.62 0.59 0.61 T 0.38 0.41 0.39 0000 --- --- --- --- 008069 00000 ------------ T 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 008699 00000 ------------ T 0.90 0.87 0.88 A 0.10 0.13 0.12 0000 --- --- --- --- 008706 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008720 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009249 00000 ------------ G 1.00 0.87 0.93 A 0.00 0.13 0.07 0000 --- --- --- --- 010076 00000 ------------ C 0.76 0.72 0.74 T 0.24 0.28 0.26 0000 --- --- --- --- 010350 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 010541 00000 ------------ C 0.81 1.00 0.92 T 0.19 0.00 0.08 0000 --- --- --- --- 010942 00000 ------------ A 0.88 0.87 0.87 T 0.12 0.13 0.13 0000 --- --- --- --- 011001 00000 ------------ T 0.84 0.98 0.91 C 0.16 0.02 0.09 0000 --- --- --- --- 011187 00000 ------------ T 0.85 0.98 0.91 C 0.15 0.02 0.09 0000 --- --- --- --- 011233* 011598 00000 ------------ A 0.87 1.00 0.93 T 0.13 0.00 0.07 0000 --- --- --- --- 011809 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 011901 00000 ------------ G 0.66 0.43 0.54 A 0.34 0.57 0.46 0000 --- --- --- --- 011971 00000 ------------ C 0.98 0.76 0.87 T 0.02 0.24 0.13 0000 --- --- --- --- 012151 00000 ------------ C 0.84 1.00 0.92 T 0.16 0.00 0.08 0000 --- --- --- --- 012244 00000 ------------ T 0.98 0.96 0.97 C 0.02 0.04 0.03 0000 --- --- --- --- 012552 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 013334 00000 ------------ A 0.97 0.93 0.94 T 0.03 0.07 0.06 0000 --- --- --- --- 013385 00000 ------------ C 0.63 0.45 0.53 T 0.37 0.55 0.47 0000 --- --- --- --- 014205 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 014396 00000 ------------ T 0.94 0.53 0.77 C 0.06 0.47 0.23 0000 --- --- --- --- 014501 00000 ------------ C 0.85 1.00 0.91 A 0.15 0.00 0.09 0000 --- --- --- --- 014888 00000 ------------ G 1.00 0.89 0.95 A 0.00 0.11 0.05 0000 --- --- --- --- 015151 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015279 00000 ------------ A 0.88 0.80 0.84 G 0.12 0.20 0.16 0000 --- --- --- --- 015895 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 016234 00000 ------------ C 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 016392 00000 ------------ A 0.42 0.72 0.56 G 0.58 0.28 0.44 0000 --- --- --- --- 016602 00974 SYNON A 0.83 0.91 0.88 G 0.17 0.09 0.12 0267 ACA ACG THR(T) THR(T) 016918 01189 NON-SYN G 0.93 1.00 0.97 T 0.07 0.00 0.03 0339 TGC TTC CYS(C) PHE(F) 017515 00000 ------------ C 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 017645 00000 ------------ C 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 017794 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 018184 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 018290 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018367 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 018490 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 019109 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019400 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019404 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019642 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020157 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 020276 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020327 00000 ------------ G 0.94 0.87 0.90 A 0.06 0.13 0.10 0000 --- --- --- --- 020392 00000 ------------ C 0.77 0.80 0.79 G 0.23 0.20 0.21 0000 --- --- --- --- 020423 00000 ------------ A 0.79 0.80 0.80 G 0.21 0.20 0.20 0000 --- --- --- --- 020691 01364 SYNON T 0.83 0.91 0.87 C 0.17 0.09 0.13 0397 GGT GGC GLY(G) GLY(G) 021102 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 021319 00000 ------------ C 0.94 0.86 0.90 T 0.06 0.14 0.10 0000 --- --- --- --- 021570 00000 ------------ G 0.42 0.72 0.56 A 0.58 0.28 0.44 0000 --- --- --- --- 021639 00000 ------------ C 0.77 0.63 0.70 A 0.23 0.37 0.30 0000 --- --- --- --- 021647 00000 ------------ A 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 021708 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 022173 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 022454 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 022744 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 022771 00000 ------------ C 0.75 0.63 0.69 T 0.25 0.37 0.31 0000 --- --- --- --- 022925 00000 ------------ G 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 024250 01772 SYNON G 0.95 1.00 0.98 A 0.05 0.00 0.02 0533 CAG CAA GLN(Q) GLN(Q) 024358 01880 SYNON C 0.95 1.00 0.98 T 0.05 0.00 0.02 0569 GAC GAT ASP(D) ASP(D) 024453 00000 ------------ - 0.88 1.00 0.94 + 0.12 0.00 0.06 0000 --- --- --- --- 024616 00000 ------------ G 0.45 0.69 0.57 A 0.55 0.31 0.43 0000 --- --- --- --- 024618 00000 ------------ G 0.71 0.79 0.75 A 0.29 0.21 0.25 0000 --- --- --- --- 024660 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 024950 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 025093 01985 SYNON G 0.88 1.00 0.94 T 0.12 0.00 0.06 0604 CGG CGT ARG(R) ARG(R) 025245 02137 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025424 00000 ------------ A 0.81 0.81 0.81 G 0.19 0.19 0.19 0000 --- --- --- --- 025455 00000 ------------ G 0.50 0.71 0.61 C 0.50 0.29 0.39 0000 --- --- --- --- 025481 00000 ------------ G 0.83 1.00 0.92 A 0.17 0.00 0.08 0000 --- --- --- --- 025638 00000 ------------ A 0.43 0.72 0.58 T 0.57 0.28 0.42 0000 --- --- --- --- 026011 00000 ------------ G 0.84 0.91 0.88 A 0.16 0.09 0.12 0000 --- --- --- --- 026044 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 026260 00000 ------------ C 0.50 0.73 0.62 T 0.50 0.27 0.38 0000 --- --- --- --- 026380 00000 ------------ C 0.50 0.73 0.62 T 0.50 0.27 0.38 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001927: TAGTCCCAGCT 002047: AAAG 003213: CA 003428: AGGAGGG 003532: TA 011233: AAA 024453: T The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 011233 - 0.00 0.02 0.01 A 0.04 0.00 0.02 AAA 0.96 0.98 0.97 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000101 00000 ------------ - 0.02 0.11 0.07 + 0.98 0.89 0.93 0000 --- --- --- --- 000304 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 000366 00000 ------------ T 0.86 1.00 0.92 G 0.14 0.00 0.08 0000 --- --- --- --- 000580 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 000612 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000616 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 000636 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000640 00000 ------------ A 0.98 0.78 0.88 G 0.02 0.22 0.12 0000 --- --- --- --- 000654 00000 ------------ C 0.95 0.85 0.90 T 0.05 0.15 0.10 0000 --- --- --- --- 000658 00000 ------------ G 0.84 1.00 0.92 C 0.16 0.00 0.08 0000 --- --- --- --- 000668 00000 ------------ A 0.95 0.85 0.90 C 0.05 0.15 0.10 0000 --- --- --- --- 000754 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 000918 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 001098 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001174 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 001310 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001627 00046 5' UTR C 0.48 0.80 0.63 T 0.52 0.20 0.37 0000 --- --- --- --- 001733 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001736 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001857 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 001875 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002235 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003001 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 003458 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 003477 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003814 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004690 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 004707 00000 ------------ A 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 004714 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 004744 00000 ------------ C 0.83 0.30 0.57 T 0.17 0.70 0.43 0000 --- --- --- --- 004797 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 004800 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 004803 00000 ------------ C 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 004842 00000 ------------ G 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 004853 00000 ------------ T 0.67 0.78 0.72 C 0.33 0.22 0.28 0000 --- --- --- --- 004856 00000 ------------ A 0.67 0.76 0.71 G 0.33 0.24 0.29 0000 --- --- --- --- 004873 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 004903 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 004941 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 004952 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 006179 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006333 00668 NON-SYN C 0.95 1.00 0.98 G 0.05 0.00 0.02 0207 CCC GCC PRO(P) ALA(A) 006570 00760 SYNON C 1.00 0.88 0.93 T 0.00 0.12 0.07 0237 CCC CCT PRO(P) PRO(P) 007040 00000 ------------ C 0.35 0.78 0.56 T 0.65 0.22 0.44 0000 --- --- --- --- 007532 00000 ------------ T 0.30 0.80 0.65 C 0.70 0.20 0.35 0000 --- --- --- --- 007589 01348 SYNON C 0.95 1.00 0.98 T 0.05 0.00 0.02 0433 AAC AAT ASN(N) ASN(N) 007708 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 008562 01683 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0545 GGC GAC GLY(G) ASP(D) 008831 01862 NON-SYN T 0.98 1.00 0.99 C 0.02 0.00 0.01 0605 TAC CAC TYR(Y) HIS(H) 009259 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 010344 00000 ------------ G 0.79 0.21 0.52 C 0.21 0.79 0.48 0000 --- --- --- --- 010406 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 010451 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010513 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000101: AT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000253 00000 ------------ C 0.59 0.83 0.70 A 0.41 0.17 0.30 0000 --- --- --- --- 000309 00000 ------------ G 0.38 0.72 0.54 C 0.62 0.28 0.46 0000 --- --- --- --- 000959 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001162 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001423 00000 ------------ C 0.50 0.72 0.61 T 0.50 0.28 0.39 0000 --- --- --- --- 001985 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 002028 00000 ------------ G 0.86 0.91 0.89 A 0.14 0.09 0.11 0000 --- --- --- --- 002045 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 002322 00069 5' UTR G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002348 00000 ------------ C 0.90 0.87 0.88 A 0.10 0.13 0.12 0000 --- --- --- --- 002776 00000 ------------ G 0.56 0.68 0.62 A 0.44 0.32 0.38 0000 --- --- --- --- 002920 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 002951 00000 ------------ G 0.90 0.98 0.93 A 0.10 0.02 0.07 0000 --- --- --- --- 003044 00000 ------------ G 0.94 0.95 0.95 C 0.06 0.05 0.05 0000 --- --- --- --- 003138 00000 ------------ C 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 003139 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 003142 00000 ------------ C 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 003159 00000 ------------ - 1.00 0.96 0.98 + 0.00 0.04 0.02 0000 --- --- --- --- 003267 00000 ------------ G 0.73 0.81 0.77 T 0.27 0.19 0.23 0000 --- --- --- --- 003276 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 003576 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 003637 00000 ------------ T 1.00 0.89 0.95 C 0.00 0.11 0.05 0000 --- --- --- --- 003793 00000 ------------ C 0.40 0.65 0.52 T 0.60 0.35 0.48 0000 --- --- --- --- 003813 00000 ------------ G 0.40 0.65 0.52 A 0.60 0.35 0.48 0000 --- --- --- --- 003824 00000 ------------ G 0.40 0.65 0.52 C 0.60 0.35 0.48 0000 --- --- --- --- 004377 00204 NON-SYN G 0.80 0.76 0.78 T 0.20 0.24 0.22 0035 GTG TTG VAL(V) LEU(L) 004392 00219 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0040 GTC ATC VAL(V) ILE(I) 004873 00000 ------------ - 0.00 0.03 0.01 + 1.00 0.97 0.99 0000 --- --- --- --- 005006 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005046 00000 ------------ T 0.77 0.74 0.76 C 0.23 0.26 0.24 0000 --- --- --- --- 005099 00000 ------------ C 0.80 0.74 0.77 G 0.20 0.26 0.23 0000 --- --- --- --- 005212 00000 ------------ T 0.77 0.74 0.76 C 0.23 0.26 0.24 0000 --- --- --- --- 005225 00000 ------------ A 0.90 0.93 0.91 G 0.10 0.07 0.09 0000 --- --- --- --- 005228 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005230 00000 ------------ T 0.77 0.74 0.76 C 0.23 0.26 0.24 0000 --- --- --- --- 005299 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005434 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007038 00000 ------------ A 0.81 0.91 0.86 C 0.19 0.09 0.14 0000 --- --- --- --- 007043 00000 ------------ T 0.85 0.91 0.88 G 0.15 0.09 0.12 0000 --- --- --- --- 007161 00000 ------------ C 0.46 0.63 0.54 A 0.54 0.37 0.46 0000 --- --- --- --- 007172 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 007282 00000 ------------ G 0.65 0.46 0.55 C 0.35 0.54 0.45 0000 --- --- --- --- 007325 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 007330 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007341 00000 ------------ T 0.94 0.85 0.89 C 0.06 0.15 0.11 0000 --- --- --- --- 007430 00000 ------------ G 0.85 0.89 0.87 A 0.15 0.11 0.13 0000 --- --- --- --- 007494 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007498 00000 ------------ - 0.81 0.72 0.77 + 0.19 0.28 0.23 0000 --- --- --- --- 007945 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008280 00000 ------------ A 0.90 0.91 0.90 G 0.10 0.09 0.10 0000 --- --- --- --- 008342 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008444 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008530 00000 ------------ A 0.89 0.85 0.87 G 0.11 0.15 0.13 0000 --- --- --- --- 008591 00000 ------------ G 0.83 0.65 0.74 C 0.17 0.35 0.26 0000 --- --- --- --- 008801 00000 ------------ T 0.76 0.61 0.68 G 0.24 0.39 0.32 0000 --- --- --- --- 008810 00000 ------------ G 0.78 0.63 0.71 T 0.22 0.37 0.29 0000 --- --- --- --- 008922 00000 ------------ C 0.78 0.61 0.70 T 0.22 0.39 0.30 0000 --- --- --- --- 008936 00000 ------------ T 0.74 0.61 0.68 C 0.26 0.39 0.32 0000 --- --- --- --- 009075 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 009265 00000 ------------ - 0.23 0.38 0.30 + 0.77 0.62 0.70 0000 --- --- --- --- 019879 00000 ------------ T 0.96 0.93 0.94 A 0.04 0.07 0.06 0000 --- --- --- --- 019931 00000 ------------ A 0.93 0.95 0.94 G 0.07 0.05 0.06 0000 --- --- --- --- 019966 00000 ------------ G 0.24 0.89 0.56 A 0.76 0.11 0.44 0000 --- --- --- --- 020138 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 020241 00000 ------------ - 0.23 0.89 0.55 + 0.77 0.11 0.45 0000 --- --- --- --- 020405 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 030528 00000 ------------ T 0.85 1.00 0.93 C 0.15 0.00 0.07 0000 --- --- --- --- 030551 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030599 00000 ------------ G 0.41 0.89 0.66 A 0.59 0.11 0.34 0000 --- --- --- --- 030684 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 030748 00000 ------------ T 0.21 0.89 0.54 G 0.79 0.11 0.46 0000 --- --- --- --- 030949 00000 ------------ A 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 031019 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 031053 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 031073 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 055875 00000 ------------ C 0.83 0.83 0.83 A 0.17 0.17 0.17 0000 --- --- --- --- 056039 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 056574 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 056626 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 056828 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 056848 00000 ------------ A 0.87 0.84 0.86 G 0.13 0.16 0.14 0000 --- --- --- --- 064995 00000 ------------ G 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 071447 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 071603 00000 ------------ A 0.67 0.34 0.50 G 0.33 0.66 0.50 0000 --- --- --- --- 071629 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 071675 00000 ------------ C 0.52 0.70 0.62 T 0.48 0.30 0.38 0000 --- --- --- --- 071904 00000 ------------ - 0.79 0.91 0.85 + 0.21 0.09 0.15 0000 --- --- --- --- 072060 00715 NON-SYN A 1.00 0.96 0.98 T 0.00 0.04 0.02 0205 TAT TTT TYR(Y) PHE(F) 072205 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 072213 00000 ------------ C 0.61 0.72 0.66 T 0.39 0.28 0.34 0000 --- --- --- --- 072268 00000 ------------ A 0.72 0.76 0.74 T 0.28 0.24 0.26 0000 --- --- --- --- 072275 00000 ------------ A 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 072342 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 072546 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 072588 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 072616 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 072679 00000 ------------ A 0.90 0.96 0.93 G 0.10 0.04 0.07 0000 --- --- --- --- 072896 00000 ------------ T 0.40 0.66 0.53 C 0.60 0.34 0.47 0000 --- --- --- --- 072897 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 072932 00000 ------------ G 0.39 0.66 0.52 A 0.61 0.34 0.48 0000 --- --- --- --- 072976 00000 ------------ T 0.41 0.66 0.53 C 0.59 0.34 0.47 0000 --- --- --- --- 072995 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 073069 00000 ------------ T 0.38 0.66 0.51 C 0.62 0.34 0.49 0000 --- --- --- --- 073073 00000 ------------ C 0.77 0.80 0.78 T 0.23 0.20 0.22 0000 --- --- --- --- 073266 00000 ------------ C 0.88 0.87 0.88 T 0.12 0.13 0.12 0000 --- --- --- --- 073295 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 073360 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 073478 00000 ------------ A 0.40 0.63 0.51 G 0.60 0.37 0.49 0000 --- --- --- --- 073535 00000 ------------ G 0.75 0.78 0.77 A 0.25 0.22 0.23 0000 --- --- --- --- 073560 00000 ------------ C 0.46 0.63 0.54 T 0.54 0.37 0.46 0000 --- --- --- --- 073880 00000 ------------ C 0.83 0.91 0.87 T 0.17 0.09 0.13 0000 --- --- --- --- 073904 00000 ------------ G 0.92 0.59 0.76 A 0.08 0.41 0.24 0000 --- --- --- --- 073939 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 074113 00000 ------------ G 0.88 0.61 0.75 T 0.12 0.39 0.25 0000 --- --- --- --- 081399 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 081400 00000 ------------ G 0.80 0.57 0.68 A 0.20 0.43 0.32 0000 --- --- --- --- 081855 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 081899 00000 ------------ G 0.90 0.80 0.85 A 0.10 0.20 0.15 0000 --- --- --- --- 081919 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 098515 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 098543 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 098566 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 098573 00000 ------------ - 0.07 0.22 0.14 + 0.93 0.78 0.86 0000 --- --- --- --- 098590 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 098669 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 098704 00000 ------------ C 0.78 0.54 0.66 A 0.22 0.46 0.34 0000 --- --- --- --- 098759 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 098913 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 099198 00000 ------------ A 0.43 0.67 0.56 T 0.57 0.33 0.44 0000 --- --- --- --- 099257 00000 ------------ A 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 099322 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 099549 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 099887 00000 ------------ G 0.79 0.74 0.77 T 0.21 0.26 0.23 0000 --- --- --- --- 099964 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 099985 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 100019 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 100034 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 100227 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 100306 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 100444 00000 ------------ A 0.82 0.57 0.70 G 0.18 0.42 0.30 0000 --- --- --- --- 100718 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 100800 01097 SYNON A 0.90 0.78 0.84 C 0.10 0.22 0.16 0332 CCA CCC PRO(P) PRO(P) 100933 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 101080 00000 ------------ A 0.89 0.78 0.83 T 0.11 0.22 0.17 0000 --- --- --- --- 101204 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 101252 00000 ------------ G 0.89 0.96 0.92 A 0.11 0.04 0.08 0000 --- --- --- --- 111535 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 111652 00000 ------------ C 0.83 0.95 0.89 T 0.17 0.05 0.11 0000 --- --- --- --- 111763 00000 ------------ T 0.82 0.86 0.84 C 0.18 0.14 0.16 0000 --- --- --- --- 111834 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 111951 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 111977 00000 ------------ G 0.81 0.74 0.78 T 0.19 0.26 0.22 0000 --- --- --- --- 112046 00000 ------------ C 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 112088 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 112263 00000 ------------ C 0.98 0.85 0.91 T 0.02 0.15 0.09 0000 --- --- --- --- 124987 00000 ------------ T 0.88 0.95 0.91 C 0.12 0.05 0.09 0000 --- --- --- --- 125000 00000 ------------ - 0.12 0.43 0.28 + 0.88 0.57 0.72 0000 --- --- --- --- 125013 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 125116 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 125146 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 125391 00000 ------------ G 0.88 0.57 0.72 A 0.12 0.43 0.28 0000 --- --- --- --- 125772 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 126151 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 126580 00000 ------------ T 0.88 0.52 0.70 C 0.12 0.48 0.30 0000 --- --- --- --- 127042 00000 ------------ C 0.98 0.86 0.92 T 0.02 0.14 0.08 0000 --- --- --- --- 127043 00000 ------------ C 0.87 0.64 0.76 T 0.13 0.36 0.24 0000 --- --- --- --- 127258 00000 ------------ G 0.95 0.65 0.80 A 0.05 0.35 0.20 0000 --- --- --- --- 140519 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 140579 00000 ------------ G 0.67 0.72 0.70 A 0.33 0.28 0.30 0000 --- --- --- --- 140686 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 140923 01520 SYNON T 0.98 1.00 0.99 C 0.02 0.00 0.01 0473 GAT GAC ASP(D) ASP(D) 141102 00000 ------------ G 0.79 0.86 0.82 A 0.21 0.14 0.18 0000 --- --- --- --- 141181 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 141416 00000 ------------ T 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 141588 00000 ------------ C 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 141658 00000 ------------ G 0.79 0.87 0.83 A 0.21 0.13 0.17 0000 --- --- --- --- 148010 00000 ------------ G 0.97 0.84 0.90 A 0.03 0.16 0.10 0000 --- --- --- --- 148318 01795 NON-SYN C 0.89 0.73 0.80 T 0.11 0.27 0.20 0565 CCG CTG PRO(P) LEU(L) 148328 01805 SYNON A 0.97 0.84 0.90 G 0.03 0.16 0.10 0568 GAA GAG GLU(E) GLU(E) 148537 00000 ------------ - 0.73 0.88 0.80 + 0.27 0.12 0.20 0000 --- --- --- --- 148606 00000 ------------ C 0.85 0.93 0.89 A 0.15 0.07 0.11 0000 --- --- --- --- 148609 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 148694 00000 ------------ A 0.85 0.75 0.80 G 0.15 0.25 0.20 0000 --- --- --- --- 148704 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 156228 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 156320 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 156325 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 156655 00000 ------------ G 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 156748 00000 -------