1 00:00:11,670 --> 00:00:12,760 ANNA MORALES MELGARES: Hi. 2 00:00:12,760 --> 00:00:13,780 My name is Anna. 3 00:00:13,780 --> 00:00:16,390 I'm from Barcelona, although I'm starting an EPFL, which 4 00:00:16,390 --> 00:00:17,810 is in Switzerland. 5 00:00:17,810 --> 00:00:22,300 It's the Polytechnical Federal School of Lausanne. 6 00:00:22,300 --> 00:00:27,270 And today, I wanted to show you potential energy surfaces. 7 00:00:27,270 --> 00:00:29,530 But I thought that might be a bit boring, 8 00:00:29,530 --> 00:00:30,970 and since it's my video, and I do 9 00:00:30,970 --> 00:00:34,090 what I want, I'm going to show you 10 00:00:34,090 --> 00:00:37,320 theme parks and slides, because why not? 11 00:00:40,210 --> 00:00:44,450 Going to make myself smaller here. 12 00:00:44,450 --> 00:00:46,010 OK. 13 00:00:46,010 --> 00:00:47,840 What do we have here? 14 00:00:47,840 --> 00:00:50,020 Well, this is the Water World. 15 00:00:50,020 --> 00:00:52,570 The Water World is this theme park 16 00:00:52,570 --> 00:00:55,630 which is in Lloret de Mar, a city next to Barcelona, 17 00:00:55,630 --> 00:00:56,880 kind of. 18 00:00:56,880 --> 00:00:59,710 And as you can see, they have these amazing slides 19 00:00:59,710 --> 00:01:01,540 that end up in a funnel, like you 20 00:01:01,540 --> 00:01:04,610 can see this guy at the bottom of the funnel just fall 21 00:01:04,610 --> 00:01:06,790 through this hole. 22 00:01:06,790 --> 00:01:08,960 But what if I want to simulate this? 23 00:01:08,960 --> 00:01:13,040 I would need a software that enables me to do this, right? 24 00:01:13,040 --> 00:01:16,840 There is some software that can do something like this, 25 00:01:16,840 --> 00:01:20,540 but I chose to use Wolfram Mathematica. 26 00:01:20,540 --> 00:01:23,390 And now I will show you my little funnel. 27 00:01:23,390 --> 00:01:24,440 Here it is. 28 00:01:24,440 --> 00:01:28,250 My humans are these black particles here. 29 00:01:28,250 --> 00:01:34,310 Now, what if I let some time pass? 30 00:01:34,310 --> 00:01:36,440 What happens to my humans? 31 00:01:36,440 --> 00:01:38,930 They get closer to the center of the funnel. 32 00:01:38,930 --> 00:01:42,870 That makes sense, because gravity pulls them 33 00:01:42,870 --> 00:01:45,300 to the lowest height, right? 34 00:01:47,820 --> 00:01:51,050 This height is actually related to gravitational energy, 35 00:01:51,050 --> 00:01:54,100 since gravitational energy is proportional to height. 36 00:01:54,100 --> 00:01:57,960 Therefore, this is just exactly the shape 37 00:01:57,960 --> 00:02:00,870 that the potential energy surface 38 00:02:00,870 --> 00:02:04,980 for the gravitational energy looks like. 39 00:02:04,980 --> 00:02:09,720 So we have constructed actually a potential energy surface. 40 00:02:09,720 --> 00:02:12,870 But these kind of surfaces can represent 41 00:02:12,870 --> 00:02:15,930 many other types of energy, not only gravitational energy, 42 00:02:15,930 --> 00:02:19,410 and can be plotted with other coordinates rather than space. 43 00:02:19,410 --> 00:02:23,010 Here, we have x and y, which only defined the space where 44 00:02:23,010 --> 00:02:25,620 these humans and funnels sit, but I 45 00:02:25,620 --> 00:02:27,090 could use other coordinates. 46 00:02:27,090 --> 00:02:30,900 Like for example, the distance between two items, 47 00:02:30,900 --> 00:02:35,310 or the state of the system, or things like this. 48 00:02:35,310 --> 00:02:38,700 Things in which energy, the energy that employing 49 00:02:38,700 --> 00:02:39,540 depends on. 50 00:02:42,850 --> 00:02:48,040 In order to simulate these things-- to simulate the funnel 51 00:02:48,040 --> 00:02:50,890 that I did or what I'm going to show you after, 52 00:02:50,890 --> 00:02:52,600 I need statistics. 53 00:02:55,260 --> 00:02:58,150 But don't run away, they're easy to understand. 54 00:03:00,940 --> 00:03:03,400 So what I'm going to do in order to simulate this 55 00:03:03,400 --> 00:03:05,510 is the following. 56 00:03:05,510 --> 00:03:09,330 Imagine that I have this blue line, which 57 00:03:09,330 --> 00:03:13,380 will be like a slide, and imagine 58 00:03:13,380 --> 00:03:17,220 that the bottom of this blue line will represent the floor-- 59 00:03:17,220 --> 00:03:18,390 the ground. 60 00:03:18,390 --> 00:03:20,670 We'll call it ground state. 61 00:03:20,670 --> 00:03:23,880 And the upper part is like something 62 00:03:23,880 --> 00:03:27,720 which is higher in energy. 63 00:03:27,720 --> 00:03:35,170 Now, I'm going to separate this slide into some finer parts. 64 00:03:35,170 --> 00:03:38,300 This is going to be the discretization of the system. 65 00:03:38,300 --> 00:03:40,520 I'm going to discretize my system. 66 00:03:40,520 --> 00:03:44,370 Here, I discretized it in five steps. 67 00:03:44,370 --> 00:03:45,620 You can see these red steps. 68 00:03:48,150 --> 00:03:50,350 What I'm going to tell my particles, 69 00:03:50,350 --> 00:03:52,960 which will represent the state of the system, 70 00:03:52,960 --> 00:03:54,140 is the following. 71 00:03:54,140 --> 00:04:00,780 So my particle will be in the initial state. 72 00:04:00,780 --> 00:04:04,380 I will tell my particle the following. 73 00:04:04,380 --> 00:04:10,680 It will attempt to go either down or either up. 74 00:04:10,680 --> 00:04:14,430 It will have 50% probabilities of trying to go up 75 00:04:14,430 --> 00:04:15,990 and trying to go down. 76 00:04:15,990 --> 00:04:19,620 Now, there is something we have to differentiate. 77 00:04:19,620 --> 00:04:22,050 One thing is the attempt. 78 00:04:22,050 --> 00:04:24,870 One thing is to try to go somewhere, 79 00:04:24,870 --> 00:04:27,970 and another different thing is actually going somewhere. 80 00:04:27,970 --> 00:04:30,600 So my particle is going to try to go up and down 81 00:04:30,600 --> 00:04:32,130 with equal probability. 82 00:04:32,130 --> 00:04:37,070 Now, if it chooses to go down, it 83 00:04:37,070 --> 00:04:42,100 will have probability equal to one to go down. 84 00:04:42,100 --> 00:04:43,830 This means that if it tries to go down, 85 00:04:43,830 --> 00:04:45,520 it will actually go down. 86 00:04:45,520 --> 00:04:48,820 Now, if it chooses to go up, it's 87 00:04:48,820 --> 00:04:51,430 not that clear that it's going to go up because-- 88 00:04:51,430 --> 00:04:56,160 and I'm going to make my screen bigger so I can show you-- 89 00:04:56,160 --> 00:05:02,260 probability of going up will be equal to this term here. 90 00:05:02,260 --> 00:05:04,710 This term depends on energy two, which 91 00:05:04,710 --> 00:05:06,690 is the energy of the upper state, 92 00:05:06,690 --> 00:05:10,480 and energy one, which is the energy of the initial state. 93 00:05:10,480 --> 00:05:12,240 The more separated they are, this 94 00:05:12,240 --> 00:05:15,690 means the bigger this barrier is. 95 00:05:15,690 --> 00:05:19,150 This is actually called energy barrier. 96 00:05:22,180 --> 00:05:24,910 The bigger this step is, the more difficult 97 00:05:24,910 --> 00:05:27,982 it will be for my particle to actually go up. 98 00:05:27,982 --> 00:05:29,440 There is another term I didn't talk 99 00:05:29,440 --> 00:05:33,290 about yet, which is this one. 100 00:05:33,290 --> 00:05:35,210 This is temperature. 101 00:05:35,210 --> 00:05:40,990 Temperature, here, will-- if temperature increases, 102 00:05:40,990 --> 00:05:46,510 the probability of my particle to go up will also increase. 103 00:05:46,510 --> 00:05:48,560 This means that the more energy we give-- 104 00:05:48,560 --> 00:05:51,640 the more thermal energy we give the system, the more 105 00:05:51,640 --> 00:05:53,790 temperature we give the system, it 106 00:05:53,790 --> 00:05:59,260 will be more probable for my particle to be able to go up. 107 00:05:59,260 --> 00:06:01,750 In a system where my temperature is close to zero, 108 00:06:01,750 --> 00:06:04,780 in a system where my temperature is super low, 109 00:06:04,780 --> 00:06:08,350 my particle will tend to go to the ground state, which 110 00:06:08,350 --> 00:06:14,400 is the bottom of my curve. 111 00:06:14,400 --> 00:06:16,410 If I give energy enough, then particle 112 00:06:16,410 --> 00:06:18,118 will be able to go anywhere. 113 00:06:22,510 --> 00:06:29,080 Now, what I'm talking about here is not a system 114 00:06:29,080 --> 00:06:31,400 with only one coordinate. 115 00:06:31,400 --> 00:06:33,700 I'm talking about a system with two coordinates, 116 00:06:33,700 --> 00:06:35,780 therefore I'm not talking about lines. 117 00:06:35,780 --> 00:06:37,330 I'm not talking about curves. 118 00:06:37,330 --> 00:06:40,030 I'm talking about surfaces. 119 00:06:40,030 --> 00:06:43,000 Then, the example I showed before 120 00:06:43,000 --> 00:06:46,420 was basically a particle that can go up and can go down, 121 00:06:46,420 --> 00:06:50,680 as you can see here with this blue row. 122 00:06:50,680 --> 00:06:53,120 But now, I'm going to have a surface, 123 00:06:53,120 --> 00:06:57,900 so my particle will be able to go many other places. 124 00:06:57,900 --> 00:07:00,560 Therefore, my particle will attempt-- 125 00:07:00,560 --> 00:07:03,710 the attempts that it can do are not two. 126 00:07:03,710 --> 00:07:05,450 There are going to be eight which 127 00:07:05,450 --> 00:07:09,280 will describe this surface. 128 00:07:09,280 --> 00:07:12,160 Now, what I wanted to show you is actually 129 00:07:12,160 --> 00:07:17,267 a real case where these surfaces can 130 00:07:17,267 --> 00:07:20,860 be really useful to understand the system, 131 00:07:20,860 --> 00:07:22,360 and these are the transition states. 132 00:07:22,360 --> 00:07:24,370 But in order to do this, I'm going 133 00:07:24,370 --> 00:07:28,600 to talk to you about the Lennard-Jones potential first. 134 00:07:28,600 --> 00:07:33,700 The Lennard-Jones potential is a very well known potential 135 00:07:33,700 --> 00:07:38,020 energy curve that describes the interaction-- 136 00:07:38,020 --> 00:07:42,550 describes the behavior of energy of the system as two atoms 137 00:07:42,550 --> 00:07:45,280 get closer, and closer, and closer together. 138 00:07:45,280 --> 00:07:49,740 Imagine, here, two atoms, which could be two hydrogen atoms 139 00:07:49,740 --> 00:07:51,000 and are teared apart. 140 00:07:51,000 --> 00:07:52,910 They're super far from each other, 141 00:07:52,910 --> 00:07:56,450 and then the energy is zero. 142 00:07:56,450 --> 00:07:58,930 When they are getting closer, and closer, and closer, 143 00:07:58,930 --> 00:08:05,190 there is a point where energy will be at its minimum. 144 00:08:05,190 --> 00:08:11,860 This minimum energy is the most stable state of the system. 145 00:08:11,860 --> 00:08:15,700 This distance will be the optimal distance-- 146 00:08:15,700 --> 00:08:18,290 will be the equilibrium state. 147 00:08:18,290 --> 00:08:23,330 Now, if we put these atoms even closer, and closer, and closer, 148 00:08:23,330 --> 00:08:25,910 the energy of the system will increase. 149 00:08:25,910 --> 00:08:31,130 An increase in energy means that the state is less happy. 150 00:08:31,130 --> 00:08:33,500 The state is less stable. 151 00:08:36,179 --> 00:08:39,179 Therefore, the most stable part of the system 152 00:08:39,179 --> 00:08:41,049 will be the minimum. 153 00:08:41,049 --> 00:08:45,700 The state will always try to be at it's minimum. 154 00:08:45,700 --> 00:08:49,355 Here, this minimum would be in a distance between these two 155 00:08:49,355 --> 00:08:49,855 atoms. 156 00:08:53,010 --> 00:08:55,350 What I wanted to talk to you about, 157 00:08:55,350 --> 00:08:58,420 actually, is triatomic hypothetic molecules. 158 00:08:58,420 --> 00:09:02,700 This molecule, especially HHF. 159 00:09:02,700 --> 00:09:05,580 HHF is a molecule which is-- 160 00:09:05,580 --> 00:09:08,360 it cannot be isolated. 161 00:09:08,360 --> 00:09:10,610 There are some experiments that show its existence 162 00:09:10,610 --> 00:09:13,940 for nano or femtoseconds. 163 00:09:13,940 --> 00:09:16,520 This exists for a super, super short amount of time. 164 00:09:16,520 --> 00:09:18,810 We could even say they are virtual, 165 00:09:18,810 --> 00:09:22,280 but it's a state where the system has to pass through 166 00:09:22,280 --> 00:09:23,360 in order to change. 167 00:09:23,360 --> 00:09:25,490 I'll explain after. 168 00:09:25,490 --> 00:09:31,730 The thing that we have here is one hydrogen atom which has-- 169 00:09:31,730 --> 00:09:34,070 we will plot. 170 00:09:34,070 --> 00:09:35,870 One of the coordinates will be-- 171 00:09:35,870 --> 00:09:38,360 the distance between this hydrogen atom, 172 00:09:38,360 --> 00:09:40,580 and the other hydrogen atom, and the other coordinate 173 00:09:40,580 --> 00:09:46,040 that we will be plotting is the distance between this hydrogen 174 00:09:46,040 --> 00:09:50,130 atom and fluorine. 175 00:09:50,130 --> 00:09:54,600 This means that we will have two Lennard-Jones potentials. 176 00:09:54,600 --> 00:09:58,477 One between HH and one between HF. 177 00:09:58,477 --> 00:09:59,685 This will describe a surface. 178 00:10:02,980 --> 00:10:06,130 First of all, I'm going to explain you what 179 00:10:06,130 --> 00:10:10,140 this transition state means. 180 00:10:10,140 --> 00:10:13,180 We will have different states of our system. 181 00:10:13,180 --> 00:10:15,180 First of all, we will have a molecule 182 00:10:15,180 --> 00:10:19,650 which is H2, and some fluorine somewhere. 183 00:10:19,650 --> 00:10:22,620 This particles-- the molecule and fluorine-- 184 00:10:22,620 --> 00:10:26,880 will collide, and we will end up with an HF 185 00:10:26,880 --> 00:10:30,780 molecule and a hydrogen atom somewhere else. 186 00:10:33,990 --> 00:10:36,090 In order for this to happen, the system 187 00:10:36,090 --> 00:10:38,550 has to undergo through another state, which 188 00:10:38,550 --> 00:10:42,780 is called a transition state, which is actually our HHF 189 00:10:42,780 --> 00:10:48,390 virtual or hypothetic molecule. 190 00:10:48,390 --> 00:10:52,800 If a system wants to go from H2 plus F 191 00:10:52,800 --> 00:10:57,870 to HF plus H or visa versa, it will preferentially 192 00:10:57,870 --> 00:11:00,490 go through this transition state. 193 00:11:00,490 --> 00:11:04,240 How can we actually see this in a potential energy surface? 194 00:11:07,370 --> 00:11:10,560 Here, I show you how the potential energy 195 00:11:10,560 --> 00:11:16,048 surface of HHF system is. 196 00:11:16,048 --> 00:11:24,660 [INAUDIBLE] described by the HF distance, 197 00:11:24,660 --> 00:11:29,610 where this minimum represents the state of the system where 198 00:11:29,610 --> 00:11:34,770 the molecule HF exists, and the other hydrogen atom 199 00:11:34,770 --> 00:11:35,550 is somewhere else. 200 00:11:38,490 --> 00:11:41,970 Here, we have another Lennard-Jones potential, 201 00:11:41,970 --> 00:11:44,380 described by the HH distance. 202 00:11:44,380 --> 00:11:47,850 So in this minimum, the state of the system 203 00:11:47,850 --> 00:11:52,680 is an H2 molecule and some fluorine somewhere else. 204 00:11:52,680 --> 00:11:55,590 Now, the preferential path for this change 205 00:11:55,590 --> 00:11:58,990 to happen from HH to HF, or vise versa, 206 00:11:58,990 --> 00:12:04,590 will be through the transition state, which is a subtle point. 207 00:12:04,590 --> 00:12:06,830 What is a subtle point? 208 00:12:06,830 --> 00:12:11,220 A subtle point is somewhere in the surface 209 00:12:11,220 --> 00:12:14,670 where the derivative of energy is zero, 210 00:12:14,670 --> 00:12:17,430 but it's not a minimum, and it's not a maximum. 211 00:12:17,430 --> 00:12:19,530 It's actually a minimum in one direction, 212 00:12:19,530 --> 00:12:21,510 and a maximum in another direction, 213 00:12:21,510 --> 00:12:26,600 and this will be the HHF state of the system, 214 00:12:26,600 --> 00:12:28,900 as you can see in this contour plot on the left. 215 00:12:34,470 --> 00:12:38,160 To illustrate this, I'm going to show you. 216 00:12:38,160 --> 00:12:43,890 Now, my particles-- I'm going to show 217 00:12:43,890 --> 00:12:46,900 some particles in the surface. 218 00:12:46,900 --> 00:12:51,870 Now, this particle means it represents the system, not 219 00:12:51,870 --> 00:12:52,620 atoms. 220 00:12:52,620 --> 00:12:53,790 It's the system. 221 00:12:53,790 --> 00:12:58,530 Here, I have an HF molecule because the system 222 00:12:58,530 --> 00:13:00,270 is in this minimum. 223 00:13:00,270 --> 00:13:09,260 Now, if the particle for some reason, 224 00:13:09,260 --> 00:13:13,880 when given enough temperature, it goes through this state-- 225 00:13:13,880 --> 00:13:16,850 this is the transition state. 226 00:13:16,850 --> 00:13:24,310 The system is HHF, but if this particle falls 227 00:13:24,310 --> 00:13:27,640 into this minimum, then the system is HH-- 228 00:13:27,640 --> 00:13:32,090 this hydrogen molecule and the fluorine somewhere else. 229 00:13:32,090 --> 00:13:36,280 Knowing this, I'm going to show you 230 00:13:36,280 --> 00:13:40,290 what happens when I have lots of particles which 231 00:13:40,290 --> 00:13:43,320 are lots of representations of the same system 232 00:13:43,320 --> 00:13:47,340 because I want to see the probability of the system to be 233 00:13:47,340 --> 00:13:48,770 in one state or the other. 234 00:13:51,620 --> 00:13:52,880 I'm going to give [INAUDIBLE]. 235 00:13:58,360 --> 00:13:59,600 This is an histogram. 236 00:13:59,600 --> 00:14:03,660 An histogram is this plot with bars 237 00:14:03,660 --> 00:14:06,465 that shows me the population. 238 00:14:06,465 --> 00:14:10,180 As you can see here, the particles 239 00:14:10,180 --> 00:14:13,240 are just running all over the place 240 00:14:13,240 --> 00:14:19,630 because I gave energy enough for them to overcome any energy 241 00:14:19,630 --> 00:14:21,250 barriers. 242 00:14:21,250 --> 00:14:30,970 But if I decrease temperature, [INAUDIBLE].. 243 00:14:40,770 --> 00:14:44,010 OK, now, here you can see that we actually 244 00:14:44,010 --> 00:14:48,970 have some preferential places for these particles-- 245 00:14:48,970 --> 00:14:51,430 these states of the system to be. 246 00:14:51,430 --> 00:14:55,450 They are in the minimums because they cannot jump in the minimum 247 00:14:55,450 --> 00:14:59,250 because they cannot jump over the energy barriers. 248 00:14:59,250 --> 00:15:01,690 Now, as you can see, they are also pretty-- 249 00:15:01,690 --> 00:15:04,960 like, in the histogram, you can see 250 00:15:04,960 --> 00:15:08,380 that if I increase temperature a little bit, 251 00:15:08,380 --> 00:15:12,430 the preferential path they take, more or less, 252 00:15:12,430 --> 00:15:16,570 is the transition state, which is done at this point. 253 00:15:21,210 --> 00:15:25,040 This is one of the things that we can use Mathematica for, 254 00:15:25,040 --> 00:15:26,980 but it's much more powerful. 255 00:15:26,980 --> 00:15:28,780 It can actually do many other things, 256 00:15:28,780 --> 00:15:32,730 and it can solve many other science related problems. 257 00:15:32,730 --> 00:15:34,930 And not even science related, you 258 00:15:34,930 --> 00:15:38,070 can even do art with Mathematica.