Lecture Notes
lecture4.pdf
Description:
This file explains sequence motifs, motifs and profile matrices, the EM approach, the MEME algorithm, representing motifs, the E-step: estimating Z, the M-step: estimating p, MEME enhancements to the basic EM approach, the ZOOPS model, the TCM model, Gibbs sampling, repeats, and a better background model, and motifs in periodic clusters.
Resource Type:
Lecture Notes
pdf
476 kB
lecture4.pdf
Course Info
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Spring
2005
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notes
Lecture Notes
assignment
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assignment
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