6.096 | Spring 2005 | Undergraduate

Algorithms for Computational Biology

Lecture Notes

Below is a partial selection of lecture notes that approximate chronologically the topics and themes listed on the calendar. The lecture notes are under development.

Lec # Topics
1 Computational Challenges (PDF)
3 Motif Discovery (PDF - 1.2 MB)
4 Gibbs Sampling (PDF)
5 Sequence Alignment (PDF - 1.4 MB)
6 RNA Secondary Structure
7 HMMs and Gene Finding (PDF)
8 Genome Evolution and Phylogenetic Trees
9 Phylogenetic Trees
10-11 Genome Rearrangements, Genome Duplication
12 Biological Networks

Course Info

As Taught In
Spring 2005
Learning Resource Types
notes Lecture Notes
assignment Programming Assignments
assignment Problem Sets