7.91J | Spring 2014 | Graduate

Foundations of Computational and Systems Biology

Recitations

7.36/7.91/20.390/20.490/6.802/HST.506 Recitation Slides

In these optional recitation sections, the teaching assistants reviewed topics covered in the lectures. Not all lectures were reviewed in recitation sessions.

SES # TOPICS
R1 Review of topics covered in Lectures 2 and 3 (PDF)
R2 Review of topics covered in Lecture 4 (PDF)
R3

Burrows–Wheeler Transform (BWT) and Alignments. Guest Lecture: Heng Li (Broad Institute)

The slide deck is not available for this guest lecture.

R4 Review of topics covered in Lectures 5 and 6 (PDF - 1.5MB)
R5 Review of topics covered in Lectures 7 and 8 (PDF - 2.1MB)
R6 Review of topics covered in Lecture 9 and 10 (PDF - 1.8MB)
R7 Review of topics covered in Lecture 10 (PDF - 3.9MB)
R8 Review of topics covered in Lectures 12 and 13 (PDF - 4.2MB)
R9 Review of topics covered in Lectures 14 and 15 (PDF - 2.6MB)
R10 Review of topics covered in Lectures 15 and 16 (PDF - 2.1MB)
R11 Review of topics covered in Lecture 18 (PDF - 1.9MB)
R12 Review of topics covered in Lectures 19 and 20 (PDF - 1.8MB)

6.874 Recitation Slides

These recitation sections were required for students in 6.874, and optional for other students. They covered additional material related to artificial intelligence to supplement the lectures. Slides are available for a selection of these recititations.

SES # TOPICS
R1 Statistics; Significance Testing; Bonferroni Correction (PDF)
R2 Clustering, Model Selection, and BIC scores (PDF - 2.2MB)
R5 Gene Expression Program Discovery Using Topic Models (PDF)
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