Introduction to the Class and Overview of Topics
Input Function, Michaelis-Menten kinetics, and Cooperativity
Autoregulation, Feedback and Bistability
Synthetic Biology and Stability Analysis in the Toggle Switch
Oscillatory Genetic Networks
Graph Properties of Transcription Networks
Feed-forward Loop Network Motif
Introduction to Stochastic Gene Expression
Causes and Consequences of Stochastic Gene Expression
Life at Low Reynold’s Number
Robustness and Bacterial Chemotaxis
Robustness in Development and Pattern Formation
Microbial Evolution Experiments and Optimal Gene Circuit Design
Evolution in Finite Populations
Clonal Interference and the Distribution of Beneficial Mutations
Fitness Landscapes and Sequence Spaces
Survival in Fluctuating Environments
Parasites, the Evolution of Virulence and Sex
Ecosystem Stability, Critical Transitions, and Biodiversity
Dynamics of Populations in Space
The Neutral Theory of Ecology
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